Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
HADHAP40939 AC016588.2-201ENST00000632484 3021 ntBASIC4.26□□□□□ -1.73
HADHAP40939 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HADHAP40939 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.26□□□□□ -1.73
HADHAP40939 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.26□□□□□ -1.73
HADHAP40939 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HADHAP40939 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
HADHAP40939 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
HADHAP40939 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
HADHAP40939 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.25□□□□□ -1.73
HADHAP40939 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
HADHAP40939 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
HADHAP40939 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
HADHAP40939 RNU1-14P-201ENST00000362759 152 ntBASIC4.25□□□□□ -1.73
HADHAP40939 RNU6-730P-201ENST00000383954 104 ntBASIC4.25□□□□□ -1.73
HADHAP40939 MT-TC-201ENST00000387405 66 ntBASIC4.25□□□□□ -1.73
HADHAP40939 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.25□□□□□ -1.73
HADHAP40939 AL583835.1-201ENST00000399570 407 ntBASIC4.25□□□□□ -1.73
HADHAP40939 SSR1P2-201ENST00000415208 787 ntBASIC4.25□□□□□ -1.73
HADHAP40939 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.25□□□□□ -1.73
HADHAP40939 NANOGP6-201ENST00000429190 847 ntBASIC4.25□□□□□ -1.73
HADHAP40939 KCTD10P1-201ENST00000434203 625 ntBASIC4.25□□□□□ -1.73
HADHAP40939 RPS3AP54-201ENST00000435535 734 ntBASIC4.25□□□□□ -1.73
HADHAP40939 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.25□□□□□ -1.73
HADHAP40939 AC010618.1-201ENST00000469924 477 ntBASIC4.25□□□□□ -1.73
HADHAP40939 AC022034.3-201ENST00000471393 478 ntBASIC4.25□□□□□ -1.73
HADHAP40939 AC078918.1-201ENST00000498515 228 ntBASIC4.25□□□□□ -1.73
HADHAP40939 AC020699.1-201ENST00000505161 445 ntBASIC4.25□□□□□ -1.73
HADHAP40939 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.25□□□□□ -1.73
HADHAP40939 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.25□□□□□ -1.73
HADHAP40939 KCTD9P2-201ENST00000512203 1013 ntBASIC4.25□□□□□ -1.73
HADHAP40939 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.25□□□□□ -1.73
HADHAP40939 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.25□□□□□ -1.73
HADHAP40939 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.25□□□□□ -1.73
HADHAP40939 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HADHAP40939 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.25□□□□□ -1.73
HADHAP40939 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.25□□□□□ -1.73
HADHAP40939 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.25□□□□□ -1.73
HADHAP40939 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.25□□□□□ -1.73
HADHAP40939 AP003385.6-201ENST00000531603 374 ntBASIC4.25□□□□□ -1.73
HADHAP40939 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HADHAP40939 CBX3P5-201ENST00000552017 521 ntBASIC4.25□□□□□ -1.73
HADHAP40939 AC063950.1-201ENST00000552036 308 ntBASIC4.25□□□□□ -1.73
HADHAP40939 OR4K7P-201ENST00000580232 945 ntBASIC4.25□□□□□ -1.73
HADHAP40939 AC112230.1-201ENST00000604342 547 ntBASIC4.25□□□□□ -1.73
HADHAP40939 IGHV3-29-201ENST00000604817 344 ntBASIC4.25□□□□□ -1.73
HADHAP40939 AC034229.4-201ENST00000607861 441 ntBASIC4.25□□□□□ -1.73
HADHAP40939 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HADHAP40939 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HADHAP40939 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HADHAP40939 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.24□□□□□ -1.73
HADHAP40939 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
HADHAP40939 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HADHAP40939 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.24□□□□□ -1.73
HADHAP40939 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HADHAP40939 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
HADHAP40939 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HADHAP40939 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HADHAP40939 RNVU1-3-201ENST00000364313 161 ntBASIC4.24□□□□□ -1.73
HADHAP40939 OR6C69P-201ENST00000394268 893 ntBASIC4.24□□□□□ -1.73
HADHAP40939 RNA5SP36-201ENST00000410197 133 ntBASIC4.24□□□□□ -1.73
HADHAP40939 RNA5SP80-201ENST00000410475 111 ntBASIC4.24□□□□□ -1.73
HADHAP40939 RN7SKP235-201ENST00000410662 305 ntBASIC4.24□□□□□ -1.73
HADHAP40939 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.24□□□□□ -1.73
HADHAP40939 MFSD13B-201ENST00000420133 1290 ntBASIC4.24□□□□□ -1.73
HADHAP40939 AL050321.1-201ENST00000432363 400 ntBASIC4.24□□□□□ -1.73
HADHAP40939 RPL23AP46-201ENST00000438548 490 ntBASIC4.24□□□□□ -1.73
HADHAP40939 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.24□□□□□ -1.73
HADHAP40939 RPL23AP76-201ENST00000441860 458 ntBASIC4.24□□□□□ -1.73
HADHAP40939 AL672167.3-201ENST00000465951 960 ntBASIC4.24□□□□□ -1.73
HADHAP40939 RPS29P19-201ENST00000479709 171 ntBASIC4.24□□□□□ -1.73
HADHAP40939 RN7SL691P-201ENST00000494487 301 ntBASIC4.24□□□□□ -1.73
HADHAP40939 AC005921.1-201ENST00000510589 286 ntBASIC4.24□□□□□ -1.73
HADHAP40939 AC109445.1-201ENST00000512356 383 ntBASIC4.24□□□□□ -1.73
HADHAP40939 AC008837.2-201ENST00000513076 418 ntBASIC4.24□□□□□ -1.73
HADHAP40939 RNA5SP49-201ENST00000516450 115 ntBASIC4.24□□□□□ -1.73
HADHAP40939 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.24□□□□□ -1.73
HADHAP40939 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.24□□□□□ -1.73
HADHAP40939 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.24□□□□□ -1.73
HADHAP40939 AP004242.1-201ENST00000533701 349 ntBASIC4.24□□□□□ -1.73
HADHAP40939 TRAV8-5-201ENST00000537369 341 ntBASIC4.24□□□□□ -1.73
HADHAP40939 AC023050.2-201ENST00000544968 387 ntBASIC4.24□□□□□ -1.73
HADHAP40939 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.24□□□□□ -1.73
HADHAP40939 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.24□□□□□ -1.73
HADHAP40939 MTND1P24-201ENST00000552175 861 ntBASIC4.24□□□□□ -1.73
HADHAP40939 PSMB7P1-201ENST00000556349 514 ntBASIC4.24□□□□□ -1.73
HADHAP40939 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.24□□□□□ -1.73
HADHAP40939 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.24□□□□□ -1.73
HADHAP40939 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.24□□□□□ -1.73
HADHAP40939 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.24□□□□□ -1.73
HADHAP40939 AC023575.1-201ENST00000580510 358 ntBASIC4.24□□□□□ -1.73
HADHAP40939 AC090616.5-202ENST00000582111 297 ntBASIC4.24□□□□□ -1.73
HADHAP40939 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.24□□□□□ -1.73
HADHAP40939 MRPS35P3-201ENST00000603189 709 ntBASIC4.24□□□□□ -1.73
HADHAP40939 AC025946.2-201ENST00000603398 234 ntBASIC4.24□□□□□ -1.73
HADHAP40939 MTND3P19-201ENST00000603825 345 ntBASIC4.24□□□□□ -1.73
HADHAP40939 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.24□□□□□ -1.73
HADHAP40939 AC069304.2-201ENST00000605154 435 ntBASIC4.24□□□□□ -1.73
HADHAP40939 AL451074.6-201ENST00000608512 729 ntBASIC4.24□□□□□ -1.73
HADHAP40939 AL354976.1-201ENST00000613843 387 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms