Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
LTBRP36941 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LTBRP36941 MAPK10-338ENST00000641647 3362 ntBASIC5.24□□□□□ -1.57
LTBRP36941 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
LTBRP36941 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LTBRP36941 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.23□□□□□ -1.57
LTBRP36941 AC130650.2-201ENST00000618736 2403 ntBASIC5.23□□□□□ -1.57
LTBRP36941 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LTBRP36941 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LTBRP36941 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LTBRP36941 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.23□□□□□ -1.57
LTBRP36941 AL590240.1-201ENST00000334118 313 ntBASIC5.23□□□□□ -1.57
LTBRP36941 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.23□□□□□ -1.57
LTBRP36941 AL161781.1-201ENST00000354277 403 ntBASIC5.23□□□□□ -1.57
LTBRP36941 RNU6-28P-201ENST00000362378 107 ntBASIC5.23□□□□□ -1.57
LTBRP36941 RNU5E-1-201ENST00000362477 120 ntBASIC5.23□□□□□ -1.57
LTBRP36941 RNA5SP447-201ENST00000363749 119 ntBASIC5.23□□□□□ -1.57
LTBRP36941 Y_RNA.813-201ENST00000364639 102 ntBASIC5.23□□□□□ -1.57
LTBRP36941 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
LTBRP36941 RNU6-1226P-201ENST00000384317 107 ntBASIC5.23□□□□□ -1.57
LTBRP36941 MIR589-201ENST00000385238 99 ntBASIC5.23□□□□□ -1.57
LTBRP36941 SNORA57.1-201ENST00000391227 145 ntBASIC5.23□□□□□ -1.57
LTBRP36941 RPL36AP36-201ENST00000418616 301 ntBASIC5.23□□□□□ -1.57
LTBRP36941 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.23□□□□□ -1.57
LTBRP36941 REREP1Y-201ENST00000422655 198 ntBASIC5.23□□□□□ -1.57
LTBRP36941 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.23□□□□□ -1.57
LTBRP36941 REREP2Y-201ENST00000439103 200 ntBASIC5.23□□□□□ -1.57
LTBRP36941 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC5.23□□□□□ -1.57
LTBRP36941 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.23□□□□□ -1.57
LTBRP36941 SLC25A18P1-201ENST00000449385 454 ntBASIC5.23□□□□□ -1.57
LTBRP36941 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC5.23□□□□□ -1.57
LTBRP36941 PLGLA-201ENST00000465668 449 ntBASIC5.23□□□□□ -1.57
LTBRP36941 AL136126.1-201ENST00000473603 402 ntBASIC5.23□□□□□ -1.57
LTBRP36941 AC079382.1-201ENST00000493346 557 ntBASIC5.23□□□□□ -1.57
LTBRP36941 AC114786.4-201ENST00000508771 728 ntBASIC5.23□□□□□ -1.57
LTBRP36941 ENPP7P9-201ENST00000514456 627 ntBASIC5.23□□□□□ -1.57
LTBRP36941 AF235103.2-201ENST00000525753 346 ntBASIC5.23□□□□□ -1.57
LTBRP36941 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.23□□□□□ -1.57
LTBRP36941 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LTBRP36941 AL109766.1-201ENST00000555080 552 ntBASIC5.23□□□□□ -1.57
LTBRP36941 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC5.23□□□□□ -1.57
LTBRP36941 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC5.23□□□□□ -1.57
LTBRP36941 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.23□□□□□ -1.57
LTBRP36941 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC5.23□□□□□ -1.57
LTBRP36941 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.23□□□□□ -1.57
LTBRP36941 AC068790.5-201ENST00000602741 355 ntBASIC5.23□□□□□ -1.57
LTBRP36941 AC005191.1-201ENST00000603950 358 ntBASIC5.23□□□□□ -1.57
LTBRP36941 AL009028.1-201ENST00000604895 802 ntBASIC5.23□□□□□ -1.57
LTBRP36941 AC121334.2-201ENST00000605387 271 ntBASIC5.23□□□□□ -1.57
LTBRP36941 AL138960.1-201ENST00000613838 513 ntBASIC5.23□□□□□ -1.57
LTBRP36941 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.23□□□□□ -1.57
LTBRP36941 MTND5P28-201ENST00000438005 1594 ntBASIC5.23□□□□□ -1.57
LTBRP36941 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.23□□□□□ -1.57
LTBRP36941 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LTBRP36941 AC083837.1-201ENST00000565297 2994 ntBASIC5.23□□□□□ -1.57
LTBRP36941 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LTBRP36941 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
LTBRP36941 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.23□□□□□ -1.57
LTBRP36941 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.23□□□□□ -1.57
LTBRP36941 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
LTBRP36941 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
LTBRP36941 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
LTBRP36941 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
LTBRP36941 AL118496.1-201ENST00000440201 1812 ntBASIC5.23□□□□□ -1.57
LTBRP36941 IQCB2P-201ENST00000401788 1633 ntBASIC5.23□□□□□ -1.57
LTBRP36941 ZNF652P1-201ENST00000442420 1309 ntBASIC5.23□□□□□ -1.57
LTBRP36941 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LTBRP36941 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LTBRP36941 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LTBRP36941 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
LTBRP36941 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.22□□□□□ -1.57
LTBRP36941 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LTBRP36941 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
LTBRP36941 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LTBRP36941 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LTBRP36941 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LTBRP36941 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.22□□□□□ -1.57
LTBRP36941 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
LTBRP36941 AC092447.10-201ENST00000620607 1652 ntBASIC5.22□□□□□ -1.57
LTBRP36941 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LTBRP36941 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LTBRP36941 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LTBRP36941 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LTBRP36941 AL591135.1-201ENST00000401578 5914 ntBASIC5.22□□□□□ -1.57
LTBRP36941 AL022323.4-201ENST00000623980 13120 ntBASIC5.22□□□□□ -1.57
LTBRP36941 SNORD113.2-201ENST00000364166 89 ntBASIC5.22□□□□□ -1.57
LTBRP36941 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.22□□□□□ -1.57
LTBRP36941 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LTBRP36941 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
LTBRP36941 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
LTBRP36941 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
LTBRP36941 AL356776.1-201ENST00000406574 447 ntBASIC5.22□□□□□ -1.57
LTBRP36941 SNORA77-201ENST00000408716 125 ntBASIC5.22□□□□□ -1.57
LTBRP36941 AC013429.2-201ENST00000418798 781 ntBASIC5.22□□□□□ -1.57
LTBRP36941 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.22□□□□□ -1.57
LTBRP36941 AL353193.1-201ENST00000421444 268 ntBASIC5.22□□□□□ -1.57
LTBRP36941 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5.22□□□□□ -1.57
LTBRP36941 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.22□□□□□ -1.57
LTBRP36941 HMGB3P12-201ENST00000438745 556 ntBASIC5.22□□□□□ -1.57
LTBRP36941 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms