Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
CLIP1P30622 MIR9-1-201ENST00000385198 89 ntBASIC4.46□□□□□ -1.7
CLIP1P30622 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.46□□□□□ -1.7
CLIP1P30622 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.7
CLIP1P30622 AC126389.1-201ENST00000477436 290 ntBASIC4.46□□□□□ -1.7
CLIP1P30622 AP004217.1-201ENST00000480579 346 ntBASIC4.46□□□□□ -1.7
CLIP1P30622 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.46□□□□□ -1.7
CLIP1P30622 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.46□□□□□ -1.7
CLIP1P30622 AC021146.5-201ENST00000503544 545 ntBASIC4.46□□□□□ -1.7
CLIP1P30622 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.46□□□□□ -1.7
CLIP1P30622 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.46□□□□□ -1.7
CLIP1P30622 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.46□□□□□ -1.7
CLIP1P30622 AL035413.2-201ENST00000604801 525 ntBASIC4.46□□□□□ -1.7
CLIP1P30622 AC010338.1-201ENST00000621823 717 ntBASIC4.46□□□□□ -1.7
CLIP1P30622 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLIP1P30622 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.45□□□□□ -1.7
CLIP1P30622 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
CLIP1P30622 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CLIP1P30622 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CLIP1P30622 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLIP1P30622 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLIP1P30622 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLIP1P30622 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLIP1P30622 BTF3P9-201ENST00000418784 283 ntBASIC4.45□□□□□ -1.7
CLIP1P30622 OOSP1P1-201ENST00000423265 274 ntBASIC4.45□□□□□ -1.7
CLIP1P30622 TXNP1-201ENST00000441872 371 ntBASIC4.45□□□□□ -1.7
CLIP1P30622 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.45□□□□□ -1.7
CLIP1P30622 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.45□□□□□ -1.7
CLIP1P30622 AC090525.1-201ENST00000479116 478 ntBASIC4.45□□□□□ -1.7
CLIP1P30622 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.45□□□□□ -1.7
CLIP1P30622 AC091515.1-201ENST00000548110 679 ntBASIC4.45□□□□□ -1.7
CLIP1P30622 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.45□□□□□ -1.7
CLIP1P30622 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.45□□□□□ -1.7
CLIP1P30622 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CLIP1P30622 AC116158.1-201ENST00000560231 2129 ntBASIC4.45□□□□□ -1.7
CLIP1P30622 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLIP1P30622 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC4.44□□□□□ -1.7
CLIP1P30622 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLIP1P30622 AL451074.5-201ENST00000415894 435 ntBASIC4.44□□□□□ -1.7
CLIP1P30622 AL513043.1-201ENST00000439124 535 ntBASIC4.44□□□□□ -1.7
CLIP1P30622 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC4.44□□□□□ -1.7
CLIP1P30622 FAM60DP-201ENST00000524174 632 ntBASIC4.44□□□□□ -1.7
CLIP1P30622 AC009101.1-201ENST00000568135 242 ntBASIC4.44□□□□□ -1.7
CLIP1P30622 AL049844.2-201ENST00000604280 628 ntBASIC4.44□□□□□ -1.7
CLIP1P30622 AC006111.3-201ENST00000622137 383 ntBASIC4.44□□□□□ -1.7
CLIP1P30622 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLIP1P30622 AC092593.1-201ENST00000515413 1815 ntBASIC4.43□□□□□ -1.7
CLIP1P30622 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CLIP1P30622 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CLIP1P30622 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLIP1P30622 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.43□□□□□ -1.7
CLIP1P30622 AL445529.1-201ENST00000398713 389 ntBASIC4.43□□□□□ -1.7
CLIP1P30622 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.43□□□□□ -1.7
CLIP1P30622 ARL5AP4-201ENST00000430731 512 ntBASIC4.43□□□□□ -1.7
CLIP1P30622 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.43□□□□□ -1.7
CLIP1P30622 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.43□□□□□ -1.7
CLIP1P30622 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.43□□□□□ -1.7
CLIP1P30622 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.43□□□□□ -1.7
CLIP1P30622 AC093755.1-201ENST00000512950 1023 ntBASIC4.43□□□□□ -1.7
CLIP1P30622 AL512310.1-201ENST00000548639 172 ntBASIC4.43□□□□□ -1.7
CLIP1P30622 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.43□□□□□ -1.7
CLIP1P30622 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC4.43□□□□□ -1.7
CLIP1P30622 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.43□□□□□ -1.7
CLIP1P30622 MIR4435-1-201ENST00000582552 80 ntBASIC4.43□□□□□ -1.7
CLIP1P30622 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.43□□□□□ -1.7
CLIP1P30622 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.43□□□□□ -1.7
CLIP1P30622 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CLIP1P30622 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.42□□□□□ -1.7
CLIP1P30622 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.42□□□□□ -1.7
CLIP1P30622 Z93242.1-201ENST00000427102 353 ntBASIC4.42□□□□□ -1.7
CLIP1P30622 AL035407.1-201ENST00000429211 571 ntBASIC4.42□□□□□ -1.7
CLIP1P30622 RPL31P13-201ENST00000484151 370 ntBASIC4.42□□□□□ -1.7
CLIP1P30622 AC114781.4-201ENST00000513707 639 ntBASIC4.42□□□□□ -1.7
CLIP1P30622 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.42□□□□□ -1.7
CLIP1P30622 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.42□□□□□ -1.7
CLIP1P30622 AC067852.4-201ENST00000590314 478 ntBASIC4.42□□□□□ -1.7
CLIP1P30622 AC131238.1-201ENST00000617135 328 ntBASIC4.42□□□□□ -1.7
CLIP1P30622 AL049780.3-201ENST00000624612 1583 ntBASIC4.42□□□□□ -1.7
CLIP1P30622 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLIP1P30622 DDX18P3-201ENST00000404856 2007 ntBASIC4.42□□□□□ -1.7
CLIP1P30622 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLIP1P30622 MIR181A2-201ENST00000384863 110 ntBASIC4.41□□□□□ -1.7
CLIP1P30622 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.41□□□□□ -1.7
CLIP1P30622 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CLIP1P30622 RNU4-29P-201ENST00000515943 174 ntBASIC4.41□□□□□ -1.7
CLIP1P30622 OR11H5P-202ENST00000641612 1325 ntBASIC4.41□□□□□ -1.7
CLIP1P30622 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CLIP1P30622 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.41□□□□□ -1.7
CLIP1P30622 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.4□□□□□ -1.7
CLIP1P30622 GTF2H2B-203ENST00000508065 1432 ntBASIC4.4□□□□□ -1.7
CLIP1P30622 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
CLIP1P30622 AL672167.1-206ENST00000356293 943 ntBASIC4.4□□□□□ -1.7
CLIP1P30622 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
CLIP1P30622 RPL7P36-201ENST00000444633 681 ntBASIC4.4□□□□□ -1.7
CLIP1P30622 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.4□□□□□ -1.7
CLIP1P30622 AC017037.2-201ENST00000513850 890 ntBASIC4.4□□□□□ -1.7
CLIP1P30622 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.4□□□□□ -1.7
CLIP1P30622 AC090115.4-201ENST00000609970 188 ntBASIC4.4□□□□□ -1.7
CLIP1P30622 AC010149.2-201ENST00000637608 315 ntBASIC4.4□□□□□ -1.7
CLIP1P30622 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.4□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms