Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.09□□□□□ -1.91
CD40LGP29965 AC107954.1-201ENST00000565906 727 ntBASIC3.09□□□□□ -1.91
CD40LGP29965 AC055876.1-202ENST00000567053 138 ntBASIC3.09□□□□□ -1.91
CD40LGP29965 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.09□□□□□ -1.91
CD40LGP29965 AL009028.1-201ENST00000604895 802 ntBASIC3.09□□□□□ -1.91
CD40LGP29965 AC004832.5-201ENST00000608677 401 ntBASIC3.09□□□□□ -1.91
CD40LGP29965 MIR6867-201ENST00000610636 67 ntBASIC3.09□□□□□ -1.91
CD40LGP29965 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CD40LGP29965 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.09□□□□□ -1.91
CD40LGP29965 AC119674.1-220ENST00000641502 1048 ntBASIC3.09□□□□□ -1.91
CD40LGP29965 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.09□□□□□ -1.91
CD40LGP29965 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CD40LGP29965 AL359893.1-201ENST00000447628 1580 ntBASIC3.08□□□□□ -1.92
CD40LGP29965 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.08□□□□□ -1.92
CD40LGP29965 AC017071.1-201ENST00000564407 2204 ntBASIC3.08□□□□□ -1.92
CD40LGP29965 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.08□□□□□ -1.92
CD40LGP29965 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CD40LGP29965 RNU1-13P-201ENST00000384499 162 ntBASIC3.08□□□□□ -1.92
CD40LGP29965 MIR1303-201ENST00000408625 86 ntBASIC3.08□□□□□ -1.92
CD40LGP29965 SNORA3.3-201ENST00000408712 125 ntBASIC3.08□□□□□ -1.92
CD40LGP29965 AC109780.2-201ENST00000413467 845 ntBASIC3.08□□□□□ -1.92
CD40LGP29965 BMS1P22-201ENST00000414726 313 ntBASIC3.08□□□□□ -1.92
CD40LGP29965 MRPL50P2-201ENST00000416821 482 ntBASIC3.08□□□□□ -1.92
CD40LGP29965 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CD40LGP29965 AL139247.1-201ENST00000422768 325 ntBASIC3.08□□□□□ -1.92
CD40LGP29965 AC091390.1-201ENST00000433904 331 ntBASIC3.08□□□□□ -1.92
CD40LGP29965 RPL21P89-201ENST00000444021 467 ntBASIC3.08□□□□□ -1.92
CD40LGP29965 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.08□□□□□ -1.92
CD40LGP29965 GAPDHP27-201ENST00000447427 1020 ntBASIC3.08□□□□□ -1.92
CD40LGP29965 AC010655.1-201ENST00000449336 292 ntBASIC3.08□□□□□ -1.92
CD40LGP29965 RPL36AP33-201ENST00000450395 310 ntBASIC3.08□□□□□ -1.92
CD40LGP29965 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.08□□□□□ -1.92
CD40LGP29965 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.08□□□□□ -1.92
CD40LGP29965 HMGB1P15-201ENST00000453854 435 ntBASIC3.08□□□□□ -1.92
CD40LGP29965 CYCSP53-201ENST00000455540 265 ntBASIC3.08□□□□□ -1.92
CD40LGP29965 snoU13.3-201ENST00000459441 104 ntBASIC3.08□□□□□ -1.92
CD40LGP29965 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.08□□□□□ -1.92
CD40LGP29965 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.08□□□□□ -1.92
CD40LGP29965 TPT1P3-201ENST00000492841 512 ntBASIC3.08□□□□□ -1.92
CD40LGP29965 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.08□□□□□ -1.92
CD40LGP29965 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.08□□□□□ -1.92
CD40LGP29965 RN7SKP21-201ENST00000516503 220 ntBASIC3.08□□□□□ -1.92
CD40LGP29965 RNU6-711P-201ENST00000517255 106 ntBASIC3.08□□□□□ -1.92
CD40LGP29965 AC104997.1-201ENST00000519761 717 ntBASIC3.08□□□□□ -1.92
CD40LGP29965 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.08□□□□□ -1.92
CD40LGP29965 MED28P5-201ENST00000528254 438 ntBASIC3.08□□□□□ -1.92
CD40LGP29965 AP000619.3-201ENST00000535634 1127 ntBASIC3.08□□□□□ -1.92
CD40LGP29965 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.08□□□□□ -1.92
CD40LGP29965 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.08□□□□□ -1.92
CD40LGP29965 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.08□□□□□ -1.92
CD40LGP29965 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.08□□□□□ -1.92
CD40LGP29965 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.08□□□□□ -1.92
CD40LGP29965 AL020997.2-201ENST00000602607 184 ntBASIC3.08□□□□□ -1.92
CD40LGP29965 MTCO3P22-201ENST00000603219 784 ntBASIC3.08□□□□□ -1.92
CD40LGP29965 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.08□□□□□ -1.92
CD40LGP29965 AC019176.2-201ENST00000611579 315 ntBASIC3.08□□□□□ -1.92
CD40LGP29965 AL354976.1-201ENST00000613843 387 ntBASIC3.08□□□□□ -1.92
CD40LGP29965 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.08□□□□□ -1.92
CD40LGP29965 AL590240.3-201ENST00000621416 943 ntBASIC3.08□□□□□ -1.92
CD40LGP29965 AF117829.1-206ENST00000621883 3802 ntBASIC3.08□□□□□ -1.92
CD40LGP29965 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CD40LGP29965 AC107081.3-201ENST00000612715 2034 ntBASIC3.08□□□□□ -1.92
CD40LGP29965 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CD40LGP29965 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CD40LGP29965 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.07□□□□□ -1.92
CD40LGP29965 AL365440.1-201ENST00000436135 2167 ntBASIC3.07□□□□□ -1.92
CD40LGP29965 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.07□□□□□ -1.92
CD40LGP29965 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.07□□□□□ -1.92
CD40LGP29965 AC126755.2-208ENST00000327792 462 ntBASIC3.07□□□□□ -1.92
CD40LGP29965 AC138969.1-213ENST00000331436 462 ntBASIC3.07□□□□□ -1.92
CD40LGP29965 RNU4-23P-201ENST00000362839 140 ntBASIC3.07□□□□□ -1.92
CD40LGP29965 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CD40LGP29965 RPS3AP26-201ENST00000398259 784 ntBASIC3.07□□□□□ -1.92
CD40LGP29965 SFR1P1-201ENST00000403720 688 ntBASIC3.07□□□□□ -1.92
CD40LGP29965 PPIAP31-201ENST00000405422 495 ntBASIC3.07□□□□□ -1.92
CD40LGP29965 RNA5SP344-201ENST00000411081 104 ntBASIC3.07□□□□□ -1.92
CD40LGP29965 RPL32P35-201ENST00000415214 394 ntBASIC3.07□□□□□ -1.92
CD40LGP29965 AL356968.1-201ENST00000416622 474 ntBASIC3.07□□□□□ -1.92
CD40LGP29965 AC093151.1-201ENST00000427711 313 ntBASIC3.07□□□□□ -1.92
CD40LGP29965 AC004975.1-201ENST00000428733 208 ntBASIC3.07□□□□□ -1.92
CD40LGP29965 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.07□□□□□ -1.92
CD40LGP29965 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.07□□□□□ -1.92
CD40LGP29965 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.07□□□□□ -1.92
CD40LGP29965 SETD6P1-201ENST00000444575 317 ntBASIC3.07□□□□□ -1.92
CD40LGP29965 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.07□□□□□ -1.92
CD40LGP29965 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.07□□□□□ -1.92
CD40LGP29965 AC023598.1-201ENST00000472521 361 ntBASIC3.07□□□□□ -1.92
CD40LGP29965 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.07□□□□□ -1.92
CD40LGP29965 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
CD40LGP29965 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.07□□□□□ -1.92
CD40LGP29965 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.07□□□□□ -1.92
CD40LGP29965 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.07□□□□□ -1.92
CD40LGP29965 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.07□□□□□ -1.92
CD40LGP29965 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CD40LGP29965 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.07□□□□□ -1.92
CD40LGP29965 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.07□□□□□ -1.92
CD40LGP29965 SERPINE4P-201ENST00000554978 281 ntBASIC3.07□□□□□ -1.92
CD40LGP29965 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.07□□□□□ -1.92
CD40LGP29965 MTCO3P24-201ENST00000572729 782 ntBASIC3.07□□□□□ -1.92
CD40LGP29965 AC053481.4-201ENST00000583164 216 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms