Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.4
RXRBP28702 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
RXRBP28702 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
RXRBP28702 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.33□□□□□ -1.4
RXRBP28702 OR14L1P-202ENST00000641545 3009 ntBASIC6.33□□□□□ -1.4
RXRBP28702 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
RXRBP28702 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RXRBP28702 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.33□□□□□ -1.4
RXRBP28702 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC6.33□□□□□ -1.4
RXRBP28702 AL022323.4-201ENST00000623980 13120 ntBASIC6.33□□□□□ -1.4
RXRBP28702 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RXRBP28702 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
RXRBP28702 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.33□□□□□ -1.4
RXRBP28702 SYF2-202ENST00000354361 926 ntTSL 2 BASIC6.33□□□□□ -1.4
RXRBP28702 Y_RNA.97-201ENST00000363094 102 ntBASIC6.33□□□□□ -1.4
RXRBP28702 RNU6-483P-201ENST00000384088 108 ntBASIC6.33□□□□□ -1.4
RXRBP28702 MIR7-3-201ENST00000384898 110 ntBASIC6.33□□□□□ -1.4
RXRBP28702 AL357515.1-201ENST00000402967 542 ntBASIC6.33□□□□□ -1.4
RXRBP28702 MIR1284-201ENST00000408337 120 ntBASIC6.33□□□□□ -1.4
RXRBP28702 RNU4-55P-201ENST00000410731 137 ntBASIC6.33□□□□□ -1.4
RXRBP28702 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC6.33□□□□□ -1.4
RXRBP28702 AL513185.2-201ENST00000425543 193 ntBASIC6.33□□□□□ -1.4
RXRBP28702 Z93242.1-201ENST00000427102 353 ntBASIC6.33□□□□□ -1.4
RXRBP28702 OR4F13P-201ENST00000428478 931 ntBASIC6.33□□□□□ -1.4
RXRBP28702 AL117339.2-201ENST00000430475 180 ntBASIC6.33□□□□□ -1.4
RXRBP28702 AC011998.1-201ENST00000433403 117 ntBASIC6.33□□□□□ -1.4
RXRBP28702 FTH1P16-201ENST00000435241 552 ntBASIC6.33□□□□□ -1.4
RXRBP28702 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC6.33□□□□□ -1.4
RXRBP28702 SDCBPP1-201ENST00000440192 890 ntBASIC6.33□□□□□ -1.4
RXRBP28702 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC6.33□□□□□ -1.4
RXRBP28702 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC6.33□□□□□ -1.4
RXRBP28702 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC6.33□□□□□ -1.4
RXRBP28702 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC6.33□□□□□ -1.4
RXRBP28702 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC6.33□□□□□ -1.4
RXRBP28702 HMGB1P29-201ENST00000505659 499 ntBASIC6.33□□□□□ -1.4
RXRBP28702 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC6.33□□□□□ -1.4
RXRBP28702 SNORA18.6-201ENST00000516792 115 ntBASIC6.33□□□□□ -1.4
RXRBP28702 IGJP1-201ENST00000522682 475 ntBASIC6.33□□□□□ -1.4
RXRBP28702 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC6.33□□□□□ -1.4
RXRBP28702 OR4A45P-201ENST00000529954 901 ntBASIC6.33□□□□□ -1.4
RXRBP28702 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC6.33□□□□□ -1.4
RXRBP28702 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC6.33□□□□□ -1.4
RXRBP28702 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC6.33□□□□□ -1.4
RXRBP28702 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC6.33□□□□□ -1.4
RXRBP28702 AC007179.3-201ENST00000604976 235 ntBASIC6.33□□□□□ -1.4
RXRBP28702 AC103710.1-201ENST00000610003 901 ntBASIC6.33□□□□□ -1.4
RXRBP28702 AP001506.1-201ENST00000615444 211 ntBASIC6.33□□□□□ -1.4
RXRBP28702 AC010205.1-201ENST00000616668 449 ntBASIC6.33□□□□□ -1.4
RXRBP28702 CDRT1-208ENST00000630868 794 ntBASIC6.33□□□□□ -1.4
RXRBP28702 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.33□□□□□ -1.4
RXRBP28702 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
RXRBP28702 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RXRBP28702 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RXRBP28702 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RXRBP28702 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RXRBP28702 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RXRBP28702 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RXRBP28702 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RXRBP28702 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RXRBP28702 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
RXRBP28702 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RXRBP28702 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.32□□□□□ -1.4
RXRBP28702 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
RXRBP28702 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RXRBP28702 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.32□□□□□ -1.4
RXRBP28702 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
RXRBP28702 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
RXRBP28702 RNU6-877P-201ENST00000383868 107 ntBASIC6.32□□□□□ -1.4
RXRBP28702 AL034403.1-201ENST00000399414 885 ntBASIC6.32□□□□□ -1.4
RXRBP28702 NACAP7-201ENST00000407371 609 ntBASIC6.32□□□□□ -1.4
RXRBP28702 RNU6-77P-201ENST00000410554 91 ntBASIC6.32□□□□□ -1.4
RXRBP28702 RNA5SP345-201ENST00000410646 108 ntBASIC6.32□□□□□ -1.4
RXRBP28702 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC6.32□□□□□ -1.4
RXRBP28702 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC6.32□□□□□ -1.4
RXRBP28702 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC6.32□□□□□ -1.4
RXRBP28702 VN1R36P-201ENST00000414936 291 ntBASIC6.32□□□□□ -1.4
RXRBP28702 AC093578.1-201ENST00000415219 368 ntBASIC6.32□□□□□ -1.4
RXRBP28702 FCF1P2-201ENST00000415284 583 ntBASIC6.32□□□□□ -1.4
RXRBP28702 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC6.32□□□□□ -1.4
RXRBP28702 HMGB3P20-201ENST00000417997 600 ntBASIC6.32□□□□□ -1.4
RXRBP28702 AC013429.2-201ENST00000418798 781 ntBASIC6.32□□□□□ -1.4
RXRBP28702 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC6.32□□□□□ -1.4
RXRBP28702 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC6.32□□□□□ -1.4
RXRBP28702 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC6.32□□□□□ -1.4
RXRBP28702 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC6.32□□□□□ -1.4
RXRBP28702 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC6.32□□□□□ -1.4
RXRBP28702 PGBD4P3-201ENST00000440731 581 ntBASIC6.32□□□□□ -1.4
RXRBP28702 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC6.32□□□□□ -1.4
RXRBP28702 DNAJC19P8-201ENST00000452887 259 ntBASIC6.32□□□□□ -1.4
RXRBP28702 snoU109.1-201ENST00000459339 135 ntBASIC6.32□□□□□ -1.4
RXRBP28702 FAM172BP-201ENST00000487497 1089 ntBASIC6.32□□□□□ -1.4
RXRBP28702 AC012170.1-201ENST00000495139 359 ntBASIC6.32□□□□□ -1.4
RXRBP28702 RPS24P16-201ENST00000497294 392 ntBASIC6.32□□□□□ -1.4
RXRBP28702 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC6.32□□□□□ -1.4
RXRBP28702 AC011352.3-201ENST00000505162 593 ntBASIC6.32□□□□□ -1.4
RXRBP28702 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
RXRBP28702 AC104108.1-201ENST00000509930 412 ntBASIC6.32□□□□□ -1.4
RXRBP28702 HMGN1P9-201ENST00000515212 298 ntBASIC6.32□□□□□ -1.4
RXRBP28702 RNU1-6P-201ENST00000516290 144 ntBASIC6.32□□□□□ -1.4
RXRBP28702 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms