Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 SCARNA24.1-201ENST00000516465 137 ntBASIC4.69□□□□□ -1.66
CD40P25942 RN7SKP116-201ENST00000516902 319 ntBASIC4.69□□□□□ -1.66
CD40P25942 IGHVIII-47-1-201ENST00000518187 331 ntBASIC4.69□□□□□ -1.66
CD40P25942 AP003072.2-201ENST00000527756 676 ntBASIC4.69□□□□□ -1.66
CD40P25942 AP001646.1-201ENST00000527936 915 ntBASIC4.69□□□□□ -1.66
CD40P25942 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.69□□□□□ -1.66
CD40P25942 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.69□□□□□ -1.66
CD40P25942 AP003385.6-201ENST00000531603 374 ntBASIC4.69□□□□□ -1.66
CD40P25942 OR8L1P-201ENST00000534005 955 ntBASIC4.69□□□□□ -1.66
CD40P25942 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.69□□□□□ -1.66
CD40P25942 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC4.69□□□□□ -1.66
CD40P25942 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.69□□□□□ -1.66
CD40P25942 AC090616.5-202ENST00000582111 297 ntBASIC4.69□□□□□ -1.66
CD40P25942 AC098848.2-201ENST00000588023 330 ntBASIC4.69□□□□□ -1.66
CD40P25942 AL669831.4-202ENST00000590817 238 ntBASIC4.69□□□□□ -1.66
CD40P25942 AC211433.2-201ENST00000608433 387 ntBASIC4.69□□□□□ -1.66
CD40P25942 AL136295.6-201ENST00000610486 658 ntBASIC4.69□□□□□ -1.66
CD40P25942 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.69□□□□□ -1.66
CD40P25942 AC109583.2-201ENST00000617367 129 ntBASIC4.69□□□□□ -1.66
CD40P25942 MIR6719-201ENST00000622428 87 ntBASIC4.69□□□□□ -1.66
CD40P25942 FER-210ENST00000628534 558 ntTSL 5 BASIC4.69□□□□□ -1.66
CD40P25942 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.69□□□□□ -1.66
CD40P25942 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CD40P25942 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
CD40P25942 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CD40P25942 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.69□□□□□ -1.66
CD40P25942 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CD40P25942 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CD40P25942 AC007938.2-201ENST00000604666 2634 ntBASIC4.69□□□□□ -1.66
CD40P25942 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.69□□□□□ -1.66
CD40P25942 AL138713.1-201ENST00000624026 2130 ntBASIC4.69□□□□□ -1.66
CD40P25942 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CD40P25942 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CD40P25942 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CD40P25942 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CD40P25942 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CD40P25942 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CD40P25942 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CD40P25942 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.68□□□□□ -1.66
CD40P25942 AC015799.1-201ENST00000622996 3122 ntBASIC4.68□□□□□ -1.66
CD40P25942 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CD40P25942 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CD40P25942 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CD40P25942 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC4.68□□□□□ -1.66
CD40P25942 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CD40P25942 RNU1-19P-201ENST00000363306 165 ntBASIC4.68□□□□□ -1.66
CD40P25942 U3.10-201ENST00000364459 214 ntBASIC4.68□□□□□ -1.66
CD40P25942 RNU6-1078P-201ENST00000364522 103 ntBASIC4.68□□□□□ -1.66
CD40P25942 MIR1-2-201ENST00000384961 85 ntBASIC4.68□□□□□ -1.66
CD40P25942 RNU11-201ENST00000387069 134 ntBASIC4.68□□□□□ -1.66
CD40P25942 SPTLC1P2-201ENST00000407089 121 ntBASIC4.68□□□□□ -1.66
CD40P25942 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.68□□□□□ -1.66
CD40P25942 RNU6-908P-201ENST00000410160 94 ntBASIC4.68□□□□□ -1.66
CD40P25942 RNA5SP56-201ENST00000410277 118 ntBASIC4.68□□□□□ -1.66
CD40P25942 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.68□□□□□ -1.66
CD40P25942 HMGN1P24-201ENST00000412282 298 ntBASIC4.68□□□□□ -1.66
CD40P25942 MRPL50P2-201ENST00000416821 482 ntBASIC4.68□□□□□ -1.66
CD40P25942 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.68□□□□□ -1.66
CD40P25942 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.68□□□□□ -1.66
CD40P25942 AC108075.1-201ENST00000424692 529 ntBASIC4.68□□□□□ -1.66
CD40P25942 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.68□□□□□ -1.66
CD40P25942 RPS27AP12-201ENST00000429552 465 ntBASIC4.68□□□□□ -1.66
CD40P25942 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.68□□□□□ -1.66
CD40P25942 GTF2IP20-201ENST00000431663 360 ntBASIC4.68□□□□□ -1.66
CD40P25942 USP12PX-201ENST00000432383 1057 ntBASIC4.68□□□□□ -1.66
CD40P25942 AL606489.2-201ENST00000433886 234 ntBASIC4.68□□□□□ -1.66
CD40P25942 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.68□□□□□ -1.66
CD40P25942 LINC02210-201ENST00000444561 288 ntBASIC4.68□□□□□ -1.66
CD40P25942 AL589765.3-201ENST00000446084 462 ntBASIC4.68□□□□□ -1.66
CD40P25942 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CD40P25942 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.68□□□□□ -1.66
CD40P25942 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.68□□□□□ -1.66
CD40P25942 REG1CP-206ENST00000447469 496 ntBASIC4.68□□□□□ -1.66
CD40P25942 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CD40P25942 RPS17P13-201ENST00000448974 407 ntBASIC4.68□□□□□ -1.66
CD40P25942 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.68□□□□□ -1.66
CD40P25942 BX842559.2-201ENST00000451418 605 ntBASIC4.68□□□□□ -1.66
CD40P25942 CEACAMP6-201ENST00000452007 574 ntBASIC4.68□□□□□ -1.66
CD40P25942 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.68□□□□□ -1.66
CD40P25942 snoU109.4-201ENST00000458953 143 ntBASIC4.68□□□□□ -1.66
CD40P25942 AC083798.1-201ENST00000472671 131 ntBASIC4.68□□□□□ -1.66
CD40P25942 RN7SL727P-201ENST00000482164 296 ntBASIC4.68□□□□□ -1.66
CD40P25942 AC041039.1-201ENST00000485656 536 ntBASIC4.68□□□□□ -1.66
CD40P25942 AC008628.2-201ENST00000502605 298 ntBASIC4.68□□□□□ -1.66
CD40P25942 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.68□□□□□ -1.66
CD40P25942 STMN1P2-201ENST00000508435 439 ntBASIC4.68□□□□□ -1.66
CD40P25942 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.68□□□□□ -1.66
CD40P25942 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.68□□□□□ -1.66
CD40P25942 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.68□□□□□ -1.66
CD40P25942 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.68□□□□□ -1.66
CD40P25942 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.68□□□□□ -1.66
CD40P25942 AL133271.1-201ENST00000538229 291 ntBASIC4.68□□□□□ -1.66
CD40P25942 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.68□□□□□ -1.66
CD40P25942 OR4T1P-201ENST00000554933 911 ntBASIC4.68□□□□□ -1.66
CD40P25942 AL109766.1-201ENST00000555080 552 ntBASIC4.68□□□□□ -1.66
CD40P25942 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.68□□□□□ -1.66
CD40P25942 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CD40P25942 MIR4458-201ENST00000578872 75 ntBASIC4.68□□□□□ -1.66
CD40P25942 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.68□□□□□ -1.66
CD40P25942 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms