Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 AC090510.2-201ENST00000617465 629 ntBASIC4.12□□□□□ -1.75
TNFRSF1BP20333 AL356596.1-201ENST00000624230 379 ntBASIC4.12□□□□□ -1.75
TNFRSF1BP20333 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TNFRSF1BP20333 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TNFRSF1BP20333 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TNFRSF1BP20333 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
TNFRSF1BP20333 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TNFRSF1BP20333 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 AC093775.1-201ENST00000624154 1868 ntBASIC4.11□□□□□ -1.75
TNFRSF1BP20333 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 RNU1-15P-201ENST00000353977 144 ntBASIC4.11□□□□□ -1.75
TNFRSF1BP20333 RNA5SP52-201ENST00000362448 134 ntBASIC4.11□□□□□ -1.75
TNFRSF1BP20333 RNU1-108P-201ENST00000362556 161 ntBASIC4.11□□□□□ -1.75
TNFRSF1BP20333 RNY4P24-201ENST00000362735 96 ntBASIC4.11□□□□□ -1.75
TNFRSF1BP20333 RNA5SP307-201ENST00000362863 116 ntBASIC4.11□□□□□ -1.75
TNFRSF1BP20333 RNA5SP28-201ENST00000363841 119 ntBASIC4.11□□□□□ -1.75
TNFRSF1BP20333 RN7SKP224-201ENST00000364140 325 ntBASIC4.11□□□□□ -1.75
TNFRSF1BP20333 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 Y_RNA.582-201ENST00000391023 95 ntBASIC4.11□□□□□ -1.75
TNFRSF1BP20333 SNORA68.2-201ENST00000391263 128 ntBASIC4.11□□□□□ -1.75
TNFRSF1BP20333 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 AL109941.1-201ENST00000401925 229 ntBASIC4.11□□□□□ -1.75
TNFRSF1BP20333 MIR548F1-201ENST00000408667 84 ntBASIC4.11□□□□□ -1.75
TNFRSF1BP20333 HMGB1P11-201ENST00000413899 637 ntBASIC4.11□□□□□ -1.75
TNFRSF1BP20333 AC234782.4-201ENST00000417646 1048 ntBASIC4.11□□□□□ -1.75
TNFRSF1BP20333 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.11□□□□□ -1.75
TNFRSF1BP20333 RBMY2KP-201ENST00000418221 992 ntBASIC4.11□□□□□ -1.75
TNFRSF1BP20333 AC048351.1-201ENST00000420064 602 ntBASIC4.11□□□□□ -1.75
TNFRSF1BP20333 AC233981.1-201ENST00000423224 461 ntBASIC4.11□□□□□ -1.75
TNFRSF1BP20333 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 AL596276.1-201ENST00000434465 418 ntBASIC4.11□□□□□ -1.75
TNFRSF1BP20333 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 GEMIN8P3-201ENST00000445417 720 ntBASIC4.11□□□□□ -1.75
TNFRSF1BP20333 RPL7P31-201ENST00000450192 724 ntBASIC4.11□□□□□ -1.75
TNFRSF1BP20333 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 RPL37P3-201ENST00000456825 293 ntBASIC4.11□□□□□ -1.75
TNFRSF1BP20333 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 SNORD42A-201ENST00000459584 64 ntBASIC4.11□□□□□ -1.75
TNFRSF1BP20333 AC023424.2-201ENST00000493479 777 ntBASIC4.11□□□□□ -1.75
TNFRSF1BP20333 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 OR5M14P-201ENST00000506803 618 ntBASIC4.11□□□□□ -1.75
TNFRSF1BP20333 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 MED28P5-201ENST00000528254 438 ntBASIC4.11□□□□□ -1.75
TNFRSF1BP20333 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 CYCSP2-201ENST00000558168 301 ntBASIC4.11□□□□□ -1.75
TNFRSF1BP20333 AC091489.2-201ENST00000566263 604 ntBASIC4.11□□□□□ -1.75
TNFRSF1BP20333 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 AC016727.1-205ENST00000605437 569 ntBASIC4.11□□□□□ -1.75
TNFRSF1BP20333 AC133644.2-201ENST00000608142 540 ntBASIC4.11□□□□□ -1.75
TNFRSF1BP20333 AF250324.2-201ENST00000608299 610 ntBASIC4.11□□□□□ -1.75
TNFRSF1BP20333 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.11□□□□□ -1.75
TNFRSF1BP20333 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.11□□□□□ -1.75
TNFRSF1BP20333 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 AL139089.1-201ENST00000620372 975 ntBASIC4.11□□□□□ -1.75
TNFRSF1BP20333 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 OR14L1P-202ENST00000641545 3009 ntBASIC4.11□□□□□ -1.75
TNFRSF1BP20333 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.11□□□□□ -1.75
TNFRSF1BP20333 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
TNFRSF1BP20333 MTCO1P14-201ENST00000441695 1559 ntBASIC4.1□□□□□ -1.75
TNFRSF1BP20333 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TNFRSF1BP20333 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.1□□□□□ -1.75
TNFRSF1BP20333 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
TNFRSF1BP20333 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TNFRSF1BP20333 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.1□□□□□ -1.75
TNFRSF1BP20333 MTND5P26-201ENST00000426018 1752 ntBASIC4.1□□□□□ -1.75
TNFRSF1BP20333 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
TNFRSF1BP20333 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TNFRSF1BP20333 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TNFRSF1BP20333 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TNFRSF1BP20333 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
TNFRSF1BP20333 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.1□□□□□ -1.75
TNFRSF1BP20333 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TNFRSF1BP20333 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms