Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PDGFRAP16234 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.06□□□□□ -1.76
PDGFRAP16234 NDUFA5P7-201ENST00000452914 242 ntBASIC4.06□□□□□ -1.76
PDGFRAP16234 CEACAMP4-201ENST00000457676 421 ntBASIC4.06□□□□□ -1.76
PDGFRAP16234 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.06□□□□□ -1.76
PDGFRAP16234 AC078817.1-201ENST00000492623 435 ntBASIC4.06□□□□□ -1.76
PDGFRAP16234 DYNLL1P6-201ENST00000503440 264 ntBASIC4.06□□□□□ -1.76
PDGFRAP16234 AC119751.4-201ENST00000507498 357 ntBASIC4.06□□□□□ -1.76
PDGFRAP16234 AC109458.1-201ENST00000508858 316 ntBASIC4.06□□□□□ -1.76
PDGFRAP16234 NPM1P41-201ENST00000512920 831 ntBASIC4.06□□□□□ -1.76
PDGFRAP16234 AC010374.2-201ENST00000512933 535 ntBASIC4.06□□□□□ -1.76
PDGFRAP16234 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.06□□□□□ -1.76
PDGFRAP16234 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.06□□□□□ -1.76
PDGFRAP16234 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PDGFRAP16234 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.06□□□□□ -1.76
PDGFRAP16234 LRRC6P1-201ENST00000532188 885 ntBASIC4.06□□□□□ -1.76
PDGFRAP16234 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.06□□□□□ -1.76
PDGFRAP16234 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.06□□□□□ -1.76
PDGFRAP16234 OR6C73P-201ENST00000546432 358 ntBASIC4.06□□□□□ -1.76
PDGFRAP16234 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.06□□□□□ -1.76
PDGFRAP16234 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.06□□□□□ -1.76
PDGFRAP16234 AC093519.1-201ENST00000566109 298 ntBASIC4.06□□□□□ -1.76
PDGFRAP16234 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.06□□□□□ -1.76
PDGFRAP16234 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
PDGFRAP16234 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.06□□□□□ -1.76
PDGFRAP16234 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.06□□□□□ -1.76
PDGFRAP16234 AC015726.1-201ENST00000602353 681 ntBASIC4.06□□□□□ -1.76
PDGFRAP16234 AC084824.4-201ENST00000620106 731 ntBASIC4.06□□□□□ -1.76
PDGFRAP16234 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
PDGFRAP16234 MFSD8-245ENST00000641743 948 ntBASIC4.06□□□□□ -1.76
PDGFRAP16234 USP8P1-201ENST00000494673 3183 ntBASIC4.06□□□□□ -1.76
PDGFRAP16234 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.06□□□□□ -1.76
PDGFRAP16234 MTND5P3-201ENST00000438536 1800 ntBASIC4.06□□□□□ -1.76
PDGFRAP16234 AL031985.3-201ENST00000565390 2449 ntBASIC4.06□□□□□ -1.76
PDGFRAP16234 AC000367.1-201ENST00000452711 1766 ntBASIC4.06□□□□□ -1.76
PDGFRAP16234 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.06□□□□□ -1.76
PDGFRAP16234 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
PDGFRAP16234 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PDGFRAP16234 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PDGFRAP16234 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PDGFRAP16234 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.05□□□□□ -1.76
PDGFRAP16234 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PDGFRAP16234 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.05□□□□□ -1.76
PDGFRAP16234 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
PDGFRAP16234 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
PDGFRAP16234 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.05□□□□□ -1.76
PDGFRAP16234 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
PDGFRAP16234 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PDGFRAP16234 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.05□□□□□ -1.76
PDGFRAP16234 Y_RNA.578-201ENST00000390903 88 ntBASIC4.05□□□□□ -1.76
PDGFRAP16234 FCF1P2-201ENST00000415284 583 ntBASIC4.05□□□□□ -1.76
PDGFRAP16234 AL391219.1-201ENST00000422570 483 ntBASIC4.05□□□□□ -1.76
PDGFRAP16234 AC005517.2-201ENST00000424673 553 ntBASIC4.05□□□□□ -1.76
PDGFRAP16234 RPS6P14-201ENST00000425165 719 ntBASIC4.05□□□□□ -1.76
PDGFRAP16234 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.05□□□□□ -1.76
PDGFRAP16234 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PDGFRAP16234 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.05□□□□□ -1.76
PDGFRAP16234 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.05□□□□□ -1.76
PDGFRAP16234 OR9M1P-201ENST00000459641 921 ntBASIC4.05□□□□□ -1.76
PDGFRAP16234 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.05□□□□□ -1.76
PDGFRAP16234 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.05□□□□□ -1.76
PDGFRAP16234 SNORA19.3-201ENST00000516165 130 ntBASIC4.05□□□□□ -1.76
PDGFRAP16234 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.05□□□□□ -1.76
PDGFRAP16234 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.05□□□□□ -1.76
PDGFRAP16234 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.05□□□□□ -1.76
PDGFRAP16234 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.05□□□□□ -1.76
PDGFRAP16234 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.05□□□□□ -1.76
PDGFRAP16234 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.05□□□□□ -1.76
PDGFRAP16234 OR4G1P-201ENST00000588632 938 ntBASIC4.05□□□□□ -1.76
PDGFRAP16234 AC069431.2-201ENST00000604149 1099 ntBASIC4.05□□□□□ -1.76
PDGFRAP16234 AL445435.1-201ENST00000604232 665 ntBASIC4.05□□□□□ -1.76
PDGFRAP16234 AL009028.1-201ENST00000604895 802 ntBASIC4.05□□□□□ -1.76
PDGFRAP16234 AC110741.2-201ENST00000605278 268 ntBASIC4.05□□□□□ -1.76
PDGFRAP16234 AC103710.3-201ENST00000608157 948 ntBASIC4.05□□□□□ -1.76
PDGFRAP16234 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.05□□□□□ -1.76
PDGFRAP16234 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.05□□□□□ -1.76
PDGFRAP16234 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.05□□□□□ -1.76
PDGFRAP16234 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
PDGFRAP16234 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.05□□□□□ -1.76
PDGFRAP16234 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PDGFRAP16234 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PDGFRAP16234 MAPK10-373ENST00000641983 6772 ntBASIC4.05□□□□□ -1.76
PDGFRAP16234 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PDGFRAP16234 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
PDGFRAP16234 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PDGFRAP16234 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PDGFRAP16234 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.04□□□□□ -1.76
PDGFRAP16234 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PDGFRAP16234 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
PDGFRAP16234 RNU6-707P-201ENST00000364647 95 ntBASIC4.04□□□□□ -1.76
PDGFRAP16234 RNU6-213P-201ENST00000384051 104 ntBASIC4.04□□□□□ -1.76
PDGFRAP16234 MIR134-201ENST00000385258 73 ntBASIC4.04□□□□□ -1.76
PDGFRAP16234 MIR199A2-201ENST00000385289 110 ntBASIC4.04□□□□□ -1.76
PDGFRAP16234 AL355379.1-201ENST00000405542 640 ntBASIC4.04□□□□□ -1.76
PDGFRAP16234 AL445189.1-201ENST00000405722 338 ntBASIC4.04□□□□□ -1.76
PDGFRAP16234 AL133264.1-201ENST00000407157 562 ntBASIC4.04□□□□□ -1.76
PDGFRAP16234 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PDGFRAP16234 AC005345.1-201ENST00000431868 217 ntBASIC4.04□□□□□ -1.76
PDGFRAP16234 GTF2IP3-201ENST00000433887 494 ntBASIC4.04□□□□□ -1.76
PDGFRAP16234 AC241584.1-201ENST00000438469 1241 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms