Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 RPS4XP5-202ENST00000449995 1334 ntBASIC3.92□□□□□ -1.78
KRT3P12035 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
KRT3P12035 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.91□□□□□ -1.78
KRT3P12035 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
KRT3P12035 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
KRT3P12035 RNU1-85P-201ENST00000364127 164 ntBASIC3.91□□□□□ -1.78
KRT3P12035 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.91□□□□□ -1.78
KRT3P12035 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
KRT3P12035 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.91□□□□□ -1.78
KRT3P12035 SOD2P1-201ENST00000396543 562 ntBASIC3.91□□□□□ -1.78
KRT3P12035 MTCO2P31-201ENST00000402702 684 ntBASIC3.91□□□□□ -1.78
KRT3P12035 Z98941.1-201ENST00000407764 100 ntBASIC3.91□□□□□ -1.78
KRT3P12035 RN7SKP263-201ENST00000411194 309 ntBASIC3.91□□□□□ -1.78
KRT3P12035 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.91□□□□□ -1.78
KRT3P12035 NUP35P2-201ENST00000416748 943 ntBASIC3.91□□□□□ -1.78
KRT3P12035 MTND4P3-201ENST00000417829 541 ntBASIC3.91□□□□□ -1.78
KRT3P12035 RPS15AP40-201ENST00000419621 391 ntBASIC3.91□□□□□ -1.78
KRT3P12035 PTP4A1P5-201ENST00000420305 455 ntBASIC3.91□□□□□ -1.78
KRT3P12035 RPL7P2-201ENST00000427639 268 ntBASIC3.91□□□□□ -1.78
KRT3P12035 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.91□□□□□ -1.78
KRT3P12035 AC010881.1-201ENST00000433830 235 ntBASIC3.91□□□□□ -1.78
KRT3P12035 HMGN2P21-201ENST00000447764 270 ntBASIC3.91□□□□□ -1.78
KRT3P12035 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.91□□□□□ -1.78
KRT3P12035 AC022034.3-201ENST00000471393 478 ntBASIC3.91□□□□□ -1.78
KRT3P12035 AC092451.1-201ENST00000480211 153 ntBASIC3.91□□□□□ -1.78
KRT3P12035 AC126121.1-201ENST00000482313 553 ntBASIC3.91□□□□□ -1.78
KRT3P12035 PRELID3BP5-201ENST00000508612 460 ntBASIC3.91□□□□□ -1.78
KRT3P12035 AC093752.1-206ENST00000511823 336 ntBASIC3.91□□□□□ -1.78
KRT3P12035 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.91□□□□□ -1.78
KRT3P12035 AC093853.1-201ENST00000515689 483 ntBASIC3.91□□□□□ -1.78
KRT3P12035 RN7SKP157-201ENST00000516174 282 ntBASIC3.91□□□□□ -1.78
KRT3P12035 RNU6-1028P-201ENST00000517164 93 ntBASIC3.91□□□□□ -1.78
KRT3P12035 AC023632.1-201ENST00000518463 375 ntBASIC3.91□□□□□ -1.78
KRT3P12035 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.91□□□□□ -1.78
KRT3P12035 HIGD1AP6-201ENST00000521833 279 ntBASIC3.91□□□□□ -1.78
KRT3P12035 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.91□□□□□ -1.78
KRT3P12035 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.91□□□□□ -1.78
KRT3P12035 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.91□□□□□ -1.78
KRT3P12035 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
KRT3P12035 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.91□□□□□ -1.78
KRT3P12035 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.91□□□□□ -1.78
KRT3P12035 MTCYBP23-201ENST00000558717 1102 ntBASIC3.91□□□□□ -1.78
KRT3P12035 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.91□□□□□ -1.78
KRT3P12035 AC087499.8-201ENST00000578406 226 ntBASIC3.91□□□□□ -1.78
KRT3P12035 MIR5685-201ENST00000579080 79 ntBASIC3.91□□□□□ -1.78
KRT3P12035 AC069431.2-201ENST00000604149 1099 ntBASIC3.91□□□□□ -1.78
KRT3P12035 AC112220.2-201ENST00000605513 533 ntBASIC3.91□□□□□ -1.78
KRT3P12035 AL359535.1-201ENST00000612100 1087 ntBASIC3.91□□□□□ -1.78
KRT3P12035 AC104763.3-201ENST00000613765 618 ntBASIC3.91□□□□□ -1.78
KRT3P12035 AC068831.8-201ENST00000620171 435 ntBASIC3.91□□□□□ -1.78
KRT3P12035 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
KRT3P12035 MAPK10-372ENST00000641954 3413 ntBASIC3.91□□□□□ -1.78
KRT3P12035 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
KRT3P12035 AL645568.2-201ENST00000432815 1337 ntBASIC3.91□□□□□ -1.78
KRT3P12035 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.91□□□□□ -1.78
KRT3P12035 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
KRT3P12035 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
KRT3P12035 RNA5SP515-201ENST00000364570 118 ntBASIC3.9□□□□□ -1.79
KRT3P12035 RNU6-356P-201ENST00000384140 107 ntBASIC3.9□□□□□ -1.79
KRT3P12035 MIR16-1-201ENST00000385271 89 ntBASIC3.9□□□□□ -1.79
KRT3P12035 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
KRT3P12035 OR51A3P-201ENST00000413596 924 ntBASIC3.9□□□□□ -1.79
KRT3P12035 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.9□□□□□ -1.79
KRT3P12035 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.9□□□□□ -1.79
KRT3P12035 SFR1P2-201ENST00000421841 730 ntBASIC3.9□□□□□ -1.79
KRT3P12035 AL139247.1-201ENST00000422768 325 ntBASIC3.9□□□□□ -1.79
KRT3P12035 AC017083.1-201ENST00000428093 483 ntBASIC3.9□□□□□ -1.79
KRT3P12035 AC092634.2-201ENST00000428146 1010 ntBASIC3.9□□□□□ -1.79
KRT3P12035 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.9□□□□□ -1.79
KRT3P12035 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.9□□□□□ -1.79
KRT3P12035 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.9□□□□□ -1.79
KRT3P12035 RPS15AP1-201ENST00000457423 391 ntBASIC3.9□□□□□ -1.79
KRT3P12035 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.9□□□□□ -1.79
KRT3P12035 snoU109.3-201ENST00000459477 145 ntBASIC3.9□□□□□ -1.79
KRT3P12035 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.9□□□□□ -1.79
KRT3P12035 AC078817.1-201ENST00000492623 435 ntBASIC3.9□□□□□ -1.79
KRT3P12035 AP001086.1-201ENST00000494882 321 ntBASIC3.9□□□□□ -1.79
KRT3P12035 AC096571.1-202ENST00000506634 735 ntBASIC3.9□□□□□ -1.79
KRT3P12035 RNU6-488P-201ENST00000515918 99 ntBASIC3.9□□□□□ -1.79
KRT3P12035 AC091163.3-201ENST00000518269 1144 ntBASIC3.9□□□□□ -1.79
KRT3P12035 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.9□□□□□ -1.79
KRT3P12035 AP001207.1-201ENST00000524051 481 ntBASIC3.9□□□□□ -1.79
KRT3P12035 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.9□□□□□ -1.79
KRT3P12035 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
KRT3P12035 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.9□□□□□ -1.79
KRT3P12035 HSPE1P5-201ENST00000561489 272 ntBASIC3.9□□□□□ -1.79
KRT3P12035 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.9□□□□□ -1.79
KRT3P12035 MIR5187-201ENST00000583479 76 ntBASIC3.9□□□□□ -1.79
KRT3P12035 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.9□□□□□ -1.79
KRT3P12035 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.9□□□□□ -1.79
KRT3P12035 AC099676.1-201ENST00000608886 657 ntBASIC3.9□□□□□ -1.79
KRT3P12035 MIR6864-201ENST00000617935 70 ntBASIC3.9□□□□□ -1.79
KRT3P12035 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
KRT3P12035 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
KRT3P12035 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
KRT3P12035 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
KRT3P12035 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
KRT3P12035 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.89□□□□□ -1.79
KRT3P12035 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
KRT3P12035 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms