Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TPM1P09493 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TPM1P09493 AC117529.2-201ENST00000512159 2068 ntBASIC3.63□□□□□ -1.83
TPM1P09493 DDX6P1-205ENST00000441966 1436 ntBASIC3.62□□□□□ -1.83
TPM1P09493 AL353743.1-202ENST00000431724 1695 ntBASIC3.62□□□□□ -1.83
TPM1P09493 AC093831.2-201ENST00000624393 3427 ntBASIC3.62□□□□□ -1.83
TPM1P09493 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
TPM1P09493 PABPC1P7-201ENST00000413177 1513 ntBASIC3.62□□□□□ -1.83
TPM1P09493 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.62□□□□□ -1.83
TPM1P09493 AP001350.1-201ENST00000601906 1524 ntBASIC3.62□□□□□ -1.83
TPM1P09493 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TPM1P09493 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.62□□□□□ -1.83
TPM1P09493 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.62□□□□□ -1.83
TPM1P09493 AL035458.1-201ENST00000433096 585 ntBASIC3.62□□□□□ -1.83
TPM1P09493 HMGN2P20-201ENST00000437531 273 ntBASIC3.62□□□□□ -1.83
TPM1P09493 RPS15AP29-201ENST00000445539 400 ntBASIC3.62□□□□□ -1.83
TPM1P09493 AC073387.1-201ENST00000453261 709 ntBASIC3.62□□□□□ -1.83
TPM1P09493 ARPC3P2-201ENST00000457786 533 ntBASIC3.62□□□□□ -1.83
TPM1P09493 ST13P14-201ENST00000474095 734 ntBASIC3.62□□□□□ -1.83
TPM1P09493 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.62□□□□□ -1.83
TPM1P09493 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.62□□□□□ -1.83
TPM1P09493 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.62□□□□□ -1.83
TPM1P09493 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.62□□□□□ -1.83
TPM1P09493 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.62□□□□□ -1.83
TPM1P09493 AL163153.1-201ENST00000554223 283 ntBASIC3.62□□□□□ -1.83
TPM1P09493 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.62□□□□□ -1.83
TPM1P09493 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
TPM1P09493 AC022916.3-201ENST00000592961 742 ntBASIC3.62□□□□□ -1.83
TPM1P09493 NTAN1P1-201ENST00000603150 646 ntBASIC3.62□□□□□ -1.83
TPM1P09493 AL590392.1-201ENST00000604960 446 ntBASIC3.62□□□□□ -1.83
TPM1P09493 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.62□□□□□ -1.83
TPM1P09493 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.62□□□□□ -1.83
TPM1P09493 AC091903.1-201ENST00000624322 454 ntBASIC3.62□□□□□ -1.83
TPM1P09493 SAGE4P-201ENST00000442271 3381 ntBASIC3.62□□□□□ -1.83
TPM1P09493 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TPM1P09493 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
TPM1P09493 AL356274.2-201ENST00000624379 3752 ntBASIC3.62□□□□□ -1.83
TPM1P09493 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.62□□□□□ -1.83
TPM1P09493 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.62□□□□□ -1.83
TPM1P09493 AC126755.2-208ENST00000327792 462 ntBASIC3.61□□□□□ -1.83
TPM1P09493 AC138969.1-213ENST00000331436 462 ntBASIC3.61□□□□□ -1.83
TPM1P09493 U8.11-201ENST00000384699 133 ntBASIC3.61□□□□□ -1.83
TPM1P09493 U8.12-201ENST00000384701 133 ntBASIC3.61□□□□□ -1.83
TPM1P09493 MIR7-1-201ENST00000384871 110 ntBASIC3.61□□□□□ -1.83
TPM1P09493 AL807761.1-201ENST00000417622 171 ntBASIC3.61□□□□□ -1.83
TPM1P09493 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
TPM1P09493 RPL21P66-201ENST00000426566 466 ntBASIC3.61□□□□□ -1.83
TPM1P09493 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.61□□□□□ -1.83
TPM1P09493 RPL6P5-201ENST00000445678 828 ntBASIC3.61□□□□□ -1.83
TPM1P09493 SSXP4-201ENST00000451349 245 ntBASIC3.61□□□□□ -1.83
TPM1P09493 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.61□□□□□ -1.83
TPM1P09493 AC104308.1-201ENST00000454621 333 ntBASIC3.61□□□□□ -1.83
TPM1P09493 U8.18-201ENST00000459285 133 ntBASIC3.61□□□□□ -1.83
TPM1P09493 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.61□□□□□ -1.83
TPM1P09493 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.61□□□□□ -1.83
TPM1P09493 NPM1P41-201ENST00000512920 831 ntBASIC3.61□□□□□ -1.83
TPM1P09493 RNU6-1073P-201ENST00000517182 106 ntBASIC3.61□□□□□ -1.83
TPM1P09493 RN7SKP283-201ENST00000517197 270 ntBASIC3.61□□□□□ -1.83
TPM1P09493 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.61□□□□□ -1.83
TPM1P09493 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.61□□□□□ -1.83
TPM1P09493 AP001207.1-201ENST00000524051 481 ntBASIC3.61□□□□□ -1.83
TPM1P09493 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.61□□□□□ -1.83
TPM1P09493 AC006116.7-201ENST00000590141 756 ntBASIC3.61□□□□□ -1.83
TPM1P09493 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.61□□□□□ -1.83
TPM1P09493 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.61□□□□□ -1.83
TPM1P09493 MTCO3P22-201ENST00000603219 784 ntBASIC3.61□□□□□ -1.83
TPM1P09493 AL451086.1-201ENST00000605596 223 ntBASIC3.61□□□□□ -1.83
TPM1P09493 AC015802.5-201ENST00000607478 399 ntBASIC3.61□□□□□ -1.83
TPM1P09493 AC084036.1-201ENST00000609190 508 ntBASIC3.61□□□□□ -1.83
TPM1P09493 U73479.1-201ENST00000618062 168 ntBASIC3.61□□□□□ -1.83
TPM1P09493 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.61□□□□□ -1.83
TPM1P09493 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.61□□□□□ -1.83
TPM1P09493 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TPM1P09493 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.61□□□□□ -1.83
TPM1P09493 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TPM1P09493 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.61□□□□□ -1.83
TPM1P09493 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.6□□□□□ -1.83
TPM1P09493 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.6□□□□□ -1.83
TPM1P09493 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
TPM1P09493 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TPM1P09493 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
TPM1P09493 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.6□□□□□ -1.83
TPM1P09493 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.6□□□□□ -1.83
TPM1P09493 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.6□□□□□ -1.83
TPM1P09493 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.6□□□□□ -1.83
TPM1P09493 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.6□□□□□ -1.83
TPM1P09493 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.6□□□□□ -1.83
TPM1P09493 C4BPAP2-201ENST00000428434 478 ntBASIC3.6□□□□□ -1.83
TPM1P09493 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.6□□□□□ -1.83
TPM1P09493 CYCSP4-201ENST00000429682 331 ntBASIC3.6□□□□□ -1.83
TPM1P09493 RPS27P5-201ENST00000444247 244 ntBASIC3.6□□□□□ -1.83
TPM1P09493 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.6□□□□□ -1.83
TPM1P09493 TPT1P12-201ENST00000448968 492 ntBASIC3.6□□□□□ -1.83
TPM1P09493 Z99714.1-201ENST00000450463 807 ntBASIC3.6□□□□□ -1.83
TPM1P09493 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.6□□□□□ -1.83
TPM1P09493 RN7SL75P-201ENST00000461926 281 ntBASIC3.6□□□□□ -1.83
TPM1P09493 AC007688.1-201ENST00000475592 759 ntBASIC3.6□□□□□ -1.83
TPM1P09493 SCARNA20.6-201ENST00000517251 106 ntBASIC3.6□□□□□ -1.83
TPM1P09493 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.6□□□□□ -1.83
TPM1P09493 AC103843.2-201ENST00000530523 682 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms