Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DQB2P05538 AC069218.2-201ENST00000411665 344 ntBASIC3.08□□□□□ -1.92
HLA-DQB2P05538 OR2AS1P-201ENST00000427827 319 ntBASIC3.08□□□□□ -1.92
HLA-DQB2P05538 MTCO1P45-201ENST00000431457 267 ntBASIC3.08□□□□□ -1.92
HLA-DQB2P05538 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
HLA-DQB2P05538 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DQB2P05538 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.08□□□□□ -1.92
HLA-DQB2P05538 UQCRHP3-201ENST00000451503 251 ntBASIC3.08□□□□□ -1.92
HLA-DQB2P05538 TVP23BP2-201ENST00000455082 615 ntBASIC3.08□□□□□ -1.92
HLA-DQB2P05538 AC078785.3-201ENST00000476607 425 ntBASIC3.08□□□□□ -1.92
HLA-DQB2P05538 AC023141.12-201ENST00000512399 199 ntBASIC3.08□□□□□ -1.92
HLA-DQB2P05538 Vault.1-201ENST00000516474 102 ntBASIC3.08□□□□□ -1.92
HLA-DQB2P05538 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.08□□□□□ -1.92
HLA-DQB2P05538 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DQB2P05538 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.08□□□□□ -1.92
HLA-DQB2P05538 AL442067.2-201ENST00000614033 363 ntBASIC3.08□□□□□ -1.92
HLA-DQB2P05538 AC007318.2-201ENST00000620999 243 ntBASIC3.08□□□□□ -1.92
HLA-DQB2P05538 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.08□□□□□ -1.92
HLA-DQB2P05538 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
HLA-DQB2P05538 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DQB2P05538 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.08□□□□□ -1.92
HLA-DQB2P05538 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DQB2P05538 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.08□□□□□ -1.92
HLA-DQB2P05538 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.08□□□□□ -1.92
HLA-DQB2P05538 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DQB2P05538 SNORA70E-201ENST00000384492 135 ntBASIC3.07□□□□□ -1.92
HLA-DQB2P05538 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DQB2P05538 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.07□□□□□ -1.92
HLA-DQB2P05538 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.07□□□□□ -1.92
HLA-DQB2P05538 RN7SL75P-201ENST00000461926 281 ntBASIC3.07□□□□□ -1.92
HLA-DQB2P05538 AP000873.1-201ENST00000463987 400 ntBASIC3.07□□□□□ -1.92
HLA-DQB2P05538 AC117440.1-201ENST00000474107 571 ntBASIC3.07□□□□□ -1.92
HLA-DQB2P05538 AC092451.1-201ENST00000480211 153 ntBASIC3.07□□□□□ -1.92
HLA-DQB2P05538 RPL23AP44-201ENST00000482216 473 ntBASIC3.07□□□□□ -1.92
HLA-DQB2P05538 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DQB2P05538 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DQB2P05538 AC022790.1-201ENST00000522872 204 ntBASIC3.07□□□□□ -1.92
HLA-DQB2P05538 AC022616.2-201ENST00000523185 300 ntBASIC3.07□□□□□ -1.92
HLA-DQB2P05538 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DQB2P05538 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DQB2P05538 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DQB2P05538 AC125494.3-201ENST00000602759 455 ntBASIC3.07□□□□□ -1.92
HLA-DQB2P05538 AP003117.1-201ENST00000602771 554 ntBASIC3.07□□□□□ -1.92
HLA-DQB2P05538 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DQB2P05538 AC245389.2-201ENST00000616023 576 ntBASIC3.07□□□□□ -1.92
HLA-DQB2P05538 AC242843.1-201ENST00000618702 573 ntBASIC3.07□□□□□ -1.92
HLA-DQB2P05538 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.07□□□□□ -1.92
HLA-DQB2P05538 MIR8057-201ENST00000620957 69 ntBASIC3.07□□□□□ -1.92
HLA-DQB2P05538 AC018816.2-201ENST00000621460 353 ntBASIC3.07□□□□□ -1.92
HLA-DQB2P05538 OR5BR1P-201ENST00000524992 1330 ntBASIC3.07□□□□□ -1.92
HLA-DQB2P05538 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DQB2P05538 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DQB2P05538 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DQB2P05538 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DQB2P05538 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-DQB2P05538 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DQB2P05538 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-DQB2P05538 RPL23AP57-201ENST00000332361 466 ntBASIC3.06□□□□□ -1.92
HLA-DQB2P05538 RNU6-666P-201ENST00000363499 107 ntBASIC3.06□□□□□ -1.92
HLA-DQB2P05538 RNA5SP167-201ENST00000365461 116 ntBASIC3.06□□□□□ -1.92
HLA-DQB2P05538 SNORA70.4-201ENST00000365509 134 ntBASIC3.06□□□□□ -1.92
HLA-DQB2P05538 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DQB2P05538 RPL21P3-201ENST00000395517 478 ntBASIC3.06□□□□□ -1.92
HLA-DQB2P05538 AL583834.1-201ENST00000406943 343 ntBASIC3.06□□□□□ -1.92
HLA-DQB2P05538 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.06□□□□□ -1.92
HLA-DQB2P05538 RN7SKP220-201ENST00000410611 288 ntBASIC3.06□□□□□ -1.92
HLA-DQB2P05538 RPL7P8-201ENST00000411964 730 ntBASIC3.06□□□□□ -1.92
HLA-DQB2P05538 AIMP1P1-201ENST00000418670 937 ntBASIC3.06□□□□□ -1.92
HLA-DQB2P05538 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DQB2P05538 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.06□□□□□ -1.92
HLA-DQB2P05538 AC146507.2-201ENST00000460608 476 ntBASIC3.06□□□□□ -1.92
HLA-DQB2P05538 RN7SL330P-201ENST00000469709 307 ntBASIC3.06□□□□□ -1.92
HLA-DQB2P05538 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DQB2P05538 OR4U1P-201ENST00000554958 912 ntBASIC3.06□□□□□ -1.92
HLA-DQB2P05538 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DQB2P05538 AC006539.2-201ENST00000601729 572 ntBASIC3.06□□□□□ -1.92
HLA-DQB2P05538 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.06□□□□□ -1.92
HLA-DQB2P05538 AC006254.3-201ENST00000603353 884 ntBASIC3.06□□□□□ -1.92
HLA-DQB2P05538 AC005021.1-201ENST00000608730 355 ntBASIC3.06□□□□□ -1.92
HLA-DQB2P05538 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DQB2P05538 AC025125.1-201ENST00000624743 1922 ntBASIC3.06□□□□□ -1.92
HLA-DQB2P05538 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-DQB2P05538 AC139713.2-210ENST00000641741 992 ntBASIC3.06□□□□□ -1.92
HLA-DQB2P05538 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DQB2P05538 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DQB2P05538 AF127577.6-201ENST00000623352 2191 ntBASIC3.05□□□□□ -1.92
HLA-DQB2P05538 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.05□□□□□ -1.92
HLA-DQB2P05538 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DQB2P05538 GABPAP-201ENST00000419271 1356 ntBASIC3.05□□□□□ -1.92
HLA-DQB2P05538 ZNF542P-204ENST00000482727 1305 ntBASIC3.05□□□□□ -1.92
HLA-DQB2P05538 DCAF13P3-201ENST00000561147 1334 ntBASIC3.05□□□□□ -1.92
HLA-DQB2P05538 RNA5SP274-201ENST00000410484 108 ntBASIC3.05□□□□□ -1.92
HLA-DQB2P05538 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DQB2P05538 AC127537.2-201ENST00000439258 465 ntBASIC3.05□□□□□ -1.92
HLA-DQB2P05538 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DQB2P05538 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.05□□□□□ -1.92
HLA-DQB2P05538 AL671855.1-201ENST00000446875 1203 ntBASIC3.05□□□□□ -1.92
HLA-DQB2P05538 C1DP3-201ENST00000455013 423 ntBASIC3.05□□□□□ -1.92
HLA-DQB2P05538 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.05□□□□□ -1.92
HLA-DQB2P05538 SNRPGP3-201ENST00000469405 227 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms