Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 RPL5P16-201ENST00000471467 790 ntBASIC1.75□□□□□ -2.13
APOBP04114 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.75□□□□□ -2.13
APOBP04114 SETP1-201ENST00000556014 845 ntBASIC1.75□□□□□ -2.13
APOBP04114 AC044913.1-201ENST00000557200 430 ntBASIC1.75□□□□□ -2.13
APOBP04114 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC1.75□□□□□ -2.13
APOBP04114 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC1.75□□□□□ -2.13
APOBP04114 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC1.75□□□□□ -2.13
APOBP04114 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
APOBP04114 AC022031.1-201ENST00000585985 2593 ntBASIC1.75□□□□□ -2.13
APOBP04114 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.75□□□□□ -2.13
APOBP04114 DDX18P3-201ENST00000404856 2007 ntBASIC1.75□□□□□ -2.13
APOBP04114 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC1.75□□□□□ -2.13
APOBP04114 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
APOBP04114 USP33-201ENST00000357428 4155 ntTSL 5 BASIC1.75□□□□□ -2.13
APOBP04114 Z98742.3-201ENST00000418637 326 ntBASIC1.74□□□□□ -2.13
APOBP04114 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC1.74□□□□□ -2.13
APOBP04114 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC1.74□□□□□ -2.13
APOBP04114 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC1.74□□□□□ -2.13
APOBP04114 AC063952.1-203ENST00000634410 658 ntBASIC1.74□□□□□ -2.13
APOBP04114 AL031985.3-201ENST00000565390 2449 ntBASIC1.74□□□□□ -2.13
APOBP04114 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
APOBP04114 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
APOBP04114 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC1.74□□□□□ -2.13
APOBP04114 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
APOBP04114 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC1.74□□□□□ -2.13
APOBP04114 AL358913.1-201ENST00000554342 121 ntBASIC1.74□□□□□ -2.13
APOBP04114 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC1.74□□□□□ -2.13
APOBP04114 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
APOBP04114 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC1.74□□□□□ -2.13
APOBP04114 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC1.74□□□□□ -2.13
APOBP04114 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
APOBP04114 RNU1-89P-201ENST00000384592 164 ntBASIC1.74□□□□□ -2.13
APOBP04114 MTCO1P52-201ENST00000433928 531 ntBASIC1.74□□□□□ -2.13
APOBP04114 AC093663.2-201ENST00000484625 313 ntBASIC1.74□□□□□ -2.13
APOBP04114 RFESD-208ENST00000513950 464 ntTSL 5 BASIC1.74□□□□□ -2.13
APOBP04114 RNA5SP458-201ENST00000516188 119 ntBASIC1.74□□□□□ -2.13
APOBP04114 AC006272.2-201ENST00000594725 163 ntBASIC1.74□□□□□ -2.13
APOBP04114 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.74□□□□□ -2.13
APOBP04114 IGKV1OR2-6-201ENST00000603485 277 ntBASIC1.74□□□□□ -2.13
APOBP04114 AC092184.1-201ENST00000625042 715 ntBASIC1.74□□□□□ -2.13
APOBP04114 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
APOBP04114 ZNF72P-201ENST00000425869 1908 ntBASIC1.74□□□□□ -2.13
APOBP04114 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
APOBP04114 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
APOBP04114 AC090543.2-201ENST00000483963 348 ntBASIC1.74□□□□□ -2.13
APOBP04114 AC019080.5-201ENST00000624891 757 ntBASIC1.74□□□□□ -2.13
APOBP04114 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
APOBP04114 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
APOBP04114 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
APOBP04114 RNA5SP445-201ENST00000515889 115 ntBASIC1.73□□□□□ -2.13
APOBP04114 NTAN1P1-201ENST00000603150 646 ntBASIC1.73□□□□□ -2.13
APOBP04114 AC010680.4-201ENST00000605334 543 ntBASIC1.73□□□□□ -2.13
APOBP04114 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC1.73□□□□□ -2.13
APOBP04114 AC244205.2-202ENST00000635781 342 ntBASIC1.73□□□□□ -2.13
APOBP04114 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
APOBP04114 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
APOBP04114 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
APOBP04114 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC1.73□□□□□ -2.13
APOBP04114 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
APOBP04114 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC1.73□□□□□ -2.13
APOBP04114 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC1.73□□□□□ -2.13
APOBP04114 RNU6-76P-201ENST00000384060 104 ntBASIC1.73□□□□□ -2.13
APOBP04114 AL137014.1-201ENST00000420490 1226 ntBASIC1.73□□□□□ -2.13
APOBP04114 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.73□□□□□ -2.13
APOBP04114 AC008507.1-201ENST00000587506 734 ntBASIC1.73□□□□□ -2.13
APOBP04114 U7.8-201ENST00000619968 63 ntBASIC1.73□□□□□ -2.13
APOBP04114 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC1.73□□□□□ -2.13
APOBP04114 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC1.73□□□□□ -2.13
APOBP04114 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC1.73□□□□□ -2.13
APOBP04114 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC1.73□□□□□ -2.13
APOBP04114 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
APOBP04114 RNA5SP99-201ENST00000364020 114 ntBASIC1.73□□□□□ -2.13
APOBP04114 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.73□□□□□ -2.13
APOBP04114 RNA5SP282-201ENST00000516355 108 ntBASIC1.73□□□□□ -2.13
APOBP04114 TGIF1P1-201ENST00000558095 802 ntBASIC1.73□□□□□ -2.13
APOBP04114 AP000942.3-201ENST00000603702 160 ntBASIC1.73□□□□□ -2.13
APOBP04114 LINC00901.1-201ENST00000617252 152 ntBASIC1.73□□□□□ -2.13
APOBP04114 AL049555.1-201ENST00000562834 1933 ntBASIC1.73□□□□□ -2.13
APOBP04114 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
APOBP04114 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
APOBP04114 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC1.73□□□□□ -2.13
APOBP04114 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
APOBP04114 AC083843.2-201ENST00000568248 6253 ntBASIC1.73□□□□□ -2.13
APOBP04114 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
APOBP04114 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
APOBP04114 AL138827.1-201ENST00000402666 306 ntBASIC1.73□□□□□ -2.13
APOBP04114 AP000926.3-201ENST00000497201 299 ntBASIC1.73□□□□□ -2.13
APOBP04114 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC1.73□□□□□ -2.13
APOBP04114 AL355493.4-201ENST00000618530 292 ntBASIC1.73□□□□□ -2.13
APOBP04114 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
APOBP04114 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
APOBP04114 RPS29P6-201ENST00000438196 145 ntBASIC1.72□□□□□ -2.13
APOBP04114 ISCA1P2-201ENST00000438679 421 ntBASIC1.72□□□□□ -2.13
APOBP04114 RPL23AP15-201ENST00000450202 459 ntBASIC1.72□□□□□ -2.13
APOBP04114 AC113430.1-201ENST00000506872 718 ntBASIC1.72□□□□□ -2.13
APOBP04114 SNORA31.21-201ENST00000517180 77 ntBASIC1.72□□□□□ -2.13
APOBP04114 HMGB1P19-201ENST00000517578 577 ntBASIC1.72□□□□□ -2.13
APOBP04114 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC1.72□□□□□ -2.13
APOBP04114 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC1.72□□□□□ -2.13
APOBP04114 AL359715.5-201ENST00000623431 443 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms