Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.66□□□□□ -1.98
SPTA1P02549 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.66□□□□□ -1.98
SPTA1P02549 PRELID3BP8-201ENST00000604148 295 ntBASIC2.66□□□□□ -1.98
SPTA1P02549 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC2.66□□□□□ -1.98
SPTA1P02549 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SPTA1P02549 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC2.66□□□□□ -1.98
SPTA1P02549 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.66□□□□□ -1.98
SPTA1P02549 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.66□□□□□ -1.98
SPTA1P02549 MIR448-201ENST00000362131 111 ntBASIC2.66□□□□□ -1.98
SPTA1P02549 SNORA25.9-201ENST00000365087 128 ntBASIC2.66□□□□□ -1.98
SPTA1P02549 AL353705.4-201ENST00000449661 238 ntBASIC2.66□□□□□ -1.98
SPTA1P02549 OR9N1P-201ENST00000491296 333 ntBASIC2.66□□□□□ -1.98
SPTA1P02549 RNU6-1053P-201ENST00000515930 101 ntBASIC2.66□□□□□ -1.98
SPTA1P02549 SCARNA20.6-201ENST00000517251 106 ntBASIC2.66□□□□□ -1.98
SPTA1P02549 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC2.66□□□□□ -1.98
SPTA1P02549 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.66□□□□□ -1.98
SPTA1P02549 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SPTA1P02549 SERPINE4P-201ENST00000554978 281 ntBASIC2.66□□□□□ -1.98
SPTA1P02549 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SPTA1P02549 AL049840.6-202ENST00000603373 279 ntBASIC2.66□□□□□ -1.98
SPTA1P02549 uc_338.32-201ENST00000615087 172 ntBASIC2.66□□□□□ -1.98
SPTA1P02549 AC007318.2-201ENST00000620999 243 ntBASIC2.66□□□□□ -1.98
SPTA1P02549 SYT14P1-202ENST00000600441 1448 ntBASIC2.65□□□□□ -1.98
SPTA1P02549 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
SPTA1P02549 HMGN2P8-201ENST00000391458 268 ntBASIC2.65□□□□□ -1.99
SPTA1P02549 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.65□□□□□ -1.99
SPTA1P02549 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC2.65□□□□□ -1.99
SPTA1P02549 AL645937.1-202ENST00000421799 937 ntBASIC2.65□□□□□ -1.99
SPTA1P02549 RPL21P109-201ENST00000422213 475 ntBASIC2.65□□□□□ -1.99
SPTA1P02549 NANOGP6-201ENST00000429190 847 ntBASIC2.65□□□□□ -1.99
SPTA1P02549 HMGN2P3-201ENST00000433603 273 ntBASIC2.65□□□□□ -1.99
SPTA1P02549 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.65□□□□□ -1.99
SPTA1P02549 HMGN2P5-201ENST00000436882 273 ntBASIC2.65□□□□□ -1.99
SPTA1P02549 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.65□□□□□ -1.99
SPTA1P02549 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC2.65□□□□□ -1.99
SPTA1P02549 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.65□□□□□ -1.99
SPTA1P02549 BNIP3P38-201ENST00000601117 544 ntBASIC2.65□□□□□ -1.99
SPTA1P02549 AC025811.1-201ENST00000604312 472 ntBASIC2.65□□□□□ -1.99
SPTA1P02549 KPNA2P2-201ENST00000419546 1489 ntBASIC2.65□□□□□ -1.99
SPTA1P02549 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SPTA1P02549 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SPTA1P02549 AC091564.4-201ENST00000533934 2194 ntBASIC2.65□□□□□ -1.99
SPTA1P02549 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
SPTA1P02549 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.65□□□□□ -1.99
SPTA1P02549 OR1S2-201ENST00000302592 978 ntBASIC2.64□□□□□ -1.99
SPTA1P02549 SNORD74.4-201ENST00000364129 80 ntBASIC2.64□□□□□ -1.99
SPTA1P02549 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
SPTA1P02549 MIR518E-201ENST00000385252 88 ntBASIC2.64□□□□□ -1.99
SPTA1P02549 RNU6-316P-201ENST00000391027 107 ntBASIC2.64□□□□□ -1.99
SPTA1P02549 NPM1P38-201ENST00000403835 865 ntBASIC2.64□□□□□ -1.99
SPTA1P02549 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.64□□□□□ -1.99
SPTA1P02549 AL353729.1-201ENST00000425044 720 ntBASIC2.64□□□□□ -1.99
SPTA1P02549 AC073587.1-201ENST00000447093 876 ntBASIC2.64□□□□□ -1.99
SPTA1P02549 RN7SL93P-201ENST00000463035 293 ntBASIC2.64□□□□□ -1.99
SPTA1P02549 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC2.64□□□□□ -1.99
SPTA1P02549 AC012123.2-201ENST00000485809 248 ntBASIC2.64□□□□□ -1.99
SPTA1P02549 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC2.64□□□□□ -1.99
SPTA1P02549 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.64□□□□□ -1.99
SPTA1P02549 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.64□□□□□ -1.99
SPTA1P02549 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SPTA1P02549 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SPTA1P02549 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
SPTA1P02549 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SPTA1P02549 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.64□□□□□ -1.99
SPTA1P02549 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.64□□□□□ -1.99
SPTA1P02549 AC010307.1-201ENST00000467206 836 ntBASIC2.64□□□□□ -1.99
SPTA1P02549 RPL21P99-201ENST00000480369 423 ntBASIC2.64□□□□□ -1.99
SPTA1P02549 AC034159.1-201ENST00000513885 583 ntBASIC2.64□□□□□ -1.99
SPTA1P02549 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.64□□□□□ -1.99
SPTA1P02549 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC2.64□□□□□ -1.99
SPTA1P02549 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.64□□□□□ -1.99
SPTA1P02549 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.64□□□□□ -1.99
SPTA1P02549 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.64□□□□□ -1.99
SPTA1P02549 AL161781.1-201ENST00000354277 403 ntBASIC2.63□□□□□ -1.99
SPTA1P02549 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SPTA1P02549 AL160275.2-201ENST00000412010 394 ntBASIC2.63□□□□□ -1.99
SPTA1P02549 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.63□□□□□ -1.99
SPTA1P02549 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.63□□□□□ -1.99
SPTA1P02549 AC010401.1-201ENST00000463867 348 ntBASIC2.63□□□□□ -1.99
SPTA1P02549 AC104687.1-201ENST00000485829 412 ntBASIC2.63□□□□□ -1.99
SPTA1P02549 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.63□□□□□ -1.99
SPTA1P02549 MIR486-1-201ENST00000612171 68 ntBASIC2.63□□□□□ -1.99
SPTA1P02549 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.63□□□□□ -1.99
SPTA1P02549 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC2.63□□□□□ -1.99
SPTA1P02549 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.63□□□□□ -1.99
SPTA1P02549 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SPTA1P02549 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
SPTA1P02549 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
SPTA1P02549 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
SPTA1P02549 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.63□□□□□ -1.99
SPTA1P02549 OR6C64P-201ENST00000419708 825 ntBASIC2.63□□□□□ -1.99
SPTA1P02549 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.63□□□□□ -1.99
SPTA1P02549 RFPL4AP3-201ENST00000515267 345 ntBASIC2.63□□□□□ -1.99
SPTA1P02549 RN7SKP272-201ENST00000516988 232 ntBASIC2.63□□□□□ -1.99
SPTA1P02549 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.63□□□□□ -1.99
SPTA1P02549 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC2.63□□□□□ -1.99
SPTA1P02549 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.63□□□□□ -1.99
SPTA1P02549 AC010680.4-201ENST00000605334 543 ntBASIC2.63□□□□□ -1.99
SPTA1P02549 PLCE1P1-201ENST00000622094 305 ntBASIC2.63□□□□□ -1.99
SPTA1P02549 AC019080.5-201ENST00000624891 757 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms