Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
TIMP1P01033 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
TIMP1P01033 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
TIMP1P01033 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
TIMP1P01033 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
TIMP1P01033 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.64□□□□□ -1.83
TIMP1P01033 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.64□□□□□ -1.83
TIMP1P01033 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TIMP1P01033 RNU6-252P-201ENST00000363232 107 ntBASIC3.64□□□□□ -1.83
TIMP1P01033 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
TIMP1P01033 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.64□□□□□ -1.83
TIMP1P01033 XKRYP4-201ENST00000414395 483 ntBASIC3.64□□□□□ -1.83
TIMP1P01033 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.64□□□□□ -1.83
TIMP1P01033 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.64□□□□□ -1.83
TIMP1P01033 SETP5-201ENST00000437270 562 ntBASIC3.64□□□□□ -1.83
TIMP1P01033 RPL34P26-201ENST00000445636 354 ntBASIC3.64□□□□□ -1.83
TIMP1P01033 XKRYP5-201ENST00000449659 483 ntBASIC3.64□□□□□ -1.83
TIMP1P01033 HMGB1P26-201ENST00000452520 628 ntBASIC3.64□□□□□ -1.83
TIMP1P01033 RN7SL863P-201ENST00000462370 296 ntBASIC3.64□□□□□ -1.83
TIMP1P01033 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
TIMP1P01033 AC084357.1-201ENST00000473404 255 ntBASIC3.64□□□□□ -1.83
TIMP1P01033 RPS26P15-201ENST00000488067 348 ntBASIC3.64□□□□□ -1.83
TIMP1P01033 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.64□□□□□ -1.83
TIMP1P01033 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
TIMP1P01033 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.64□□□□□ -1.83
TIMP1P01033 AC092747.2-201ENST00000545069 983 ntBASIC3.64□□□□□ -1.83
TIMP1P01033 AC083899.3-201ENST00000603413 594 ntBASIC3.64□□□□□ -1.83
TIMP1P01033 AL139286.1-201ENST00000604465 483 ntBASIC3.64□□□□□ -1.83
TIMP1P01033 RNVU1-4-201ENST00000612985 164 ntBASIC3.64□□□□□ -1.83
TIMP1P01033 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.64□□□□□ -1.83
TIMP1P01033 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TIMP1P01033 ATP5A1P2-202ENST00000616464 443 ntBASIC3.64□□□□□ -1.83
TIMP1P01033 AC004825.2-201ENST00000616634 455 ntBASIC3.64□□□□□ -1.83
TIMP1P01033 AL163051.2-201ENST00000618976 735 ntBASIC3.64□□□□□ -1.83
TIMP1P01033 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
TIMP1P01033 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TIMP1P01033 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TIMP1P01033 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.63□□□□□ -1.83
TIMP1P01033 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.63□□□□□ -1.83
TIMP1P01033 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TIMP1P01033 RNA5SP502-201ENST00000362694 119 ntBASIC3.63□□□□□ -1.83
TIMP1P01033 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TIMP1P01033 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.63□□□□□ -1.83
TIMP1P01033 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.63□□□□□ -1.83
TIMP1P01033 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.63□□□□□ -1.83
TIMP1P01033 RPL23AP69-201ENST00000431134 458 ntBASIC3.63□□□□□ -1.83
TIMP1P01033 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.63□□□□□ -1.83
TIMP1P01033 DNAJC19P8-201ENST00000452887 259 ntBASIC3.63□□□□□ -1.83
TIMP1P01033 KC877373.1-201ENST00000479066 408 ntBASIC3.63□□□□□ -1.83
TIMP1P01033 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.63□□□□□ -1.83
TIMP1P01033 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.63□□□□□ -1.83
TIMP1P01033 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.63□□□□□ -1.83
TIMP1P01033 PSMA2P1-201ENST00000526365 646 ntBASIC3.63□□□□□ -1.83
TIMP1P01033 AC087276.1-201ENST00000529659 480 ntBASIC3.63□□□□□ -1.83
TIMP1P01033 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
TIMP1P01033 AC135001.1-201ENST00000544546 283 ntBASIC3.63□□□□□ -1.83
TIMP1P01033 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.63□□□□□ -1.83
TIMP1P01033 DUXAP6-201ENST00000553858 601 ntBASIC3.63□□□□□ -1.83
TIMP1P01033 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.63□□□□□ -1.83
TIMP1P01033 AL109741.3-201ENST00000561748 592 ntBASIC3.63□□□□□ -1.83
TIMP1P01033 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.63□□□□□ -1.83
TIMP1P01033 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.63□□□□□ -1.83
TIMP1P01033 AC005776.1-201ENST00000603164 290 ntBASIC3.63□□□□□ -1.83
TIMP1P01033 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.63□□□□□ -1.83
TIMP1P01033 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.63□□□□□ -1.83
TIMP1P01033 AC006249.1-201ENST00000621223 471 ntBASIC3.63□□□□□ -1.83
TIMP1P01033 AL356321.1-201ENST00000621360 228 ntBASIC3.63□□□□□ -1.83
TIMP1P01033 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.63□□□□□ -1.83
TIMP1P01033 AC018692.3-201ENST00000623929 123 ntBASIC3.63□□□□□ -1.83
TIMP1P01033 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TIMP1P01033 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.63□□□□□ -1.83
TIMP1P01033 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.63□□□□□ -1.83
TIMP1P01033 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.63□□□□□ -1.83
TIMP1P01033 OR5BR1P-201ENST00000524992 1330 ntBASIC3.63□□□□□ -1.83
TIMP1P01033 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.63□□□□□ -1.83
TIMP1P01033 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TIMP1P01033 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.63□□□□□ -1.83
TIMP1P01033 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.63□□□□□ -1.83
TIMP1P01033 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TIMP1P01033 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
TIMP1P01033 SRP72P2-201ENST00000344851 1979 ntBASIC3.62□□□□□ -1.83
TIMP1P01033 RNA5SP235-201ENST00000365411 114 ntBASIC3.62□□□□□ -1.83
TIMP1P01033 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
TIMP1P01033 RNU6-185P-201ENST00000384421 107 ntBASIC3.62□□□□□ -1.83
TIMP1P01033 HSPE1P8-201ENST00000406997 288 ntBASIC3.62□□□□□ -1.83
TIMP1P01033 AC010385.1-201ENST00000412374 256 ntBASIC3.62□□□□□ -1.83
TIMP1P01033 AC105402.1-201ENST00000413336 545 ntBASIC3.62□□□□□ -1.83
TIMP1P01033 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.62□□□□□ -1.83
TIMP1P01033 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TIMP1P01033 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.62□□□□□ -1.83
TIMP1P01033 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.62□□□□□ -1.83
TIMP1P01033 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.62□□□□□ -1.83
TIMP1P01033 UBE2V1P6-201ENST00000430840 422 ntBASIC3.62□□□□□ -1.83
TIMP1P01033 AL353705.1-201ENST00000433468 480 ntBASIC3.62□□□□□ -1.83
TIMP1P01033 MTCO1P52-201ENST00000433928 531 ntBASIC3.62□□□□□ -1.83
TIMP1P01033 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.62□□□□□ -1.83
TIMP1P01033 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.62□□□□□ -1.83
TIMP1P01033 AL031663.1-201ENST00000437445 219 ntBASIC3.62□□□□□ -1.83
TIMP1P01033 RNFT1P2-201ENST00000443064 757 ntBASIC3.62□□□□□ -1.83
TIMP1P01033 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms