Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 RNA5SP447-201ENST00000363749 119 ntBASIC3.99□□□□□ -1.77
NKX2-2O95096 RNVU1-3-201ENST00000364313 161 ntBASIC3.99□□□□□ -1.77
NKX2-2O95096 SNORD116-8-201ENST00000384365 95 ntBASIC3.99□□□□□ -1.77
NKX2-2O95096 MT-TC-201ENST00000387405 66 ntBASIC3.99□□□□□ -1.77
NKX2-2O95096 DHFRP6-201ENST00000401776 268 ntBASIC3.99□□□□□ -1.77
NKX2-2O95096 RNA5SP56-201ENST00000410277 118 ntBASIC3.99□□□□□ -1.77
NKX2-2O95096 RPS23P10-201ENST00000416185 486 ntBASIC3.99□□□□□ -1.77
NKX2-2O95096 FNDC3CP-201ENST00000420795 1155 ntBASIC3.99□□□□□ -1.77
NKX2-2O95096 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.99□□□□□ -1.77
NKX2-2O95096 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.99□□□□□ -1.77
NKX2-2O95096 ZYG11AP1-201ENST00000430329 837 ntBASIC3.99□□□□□ -1.77
NKX2-2O95096 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.99□□□□□ -1.77
NKX2-2O95096 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.99□□□□□ -1.77
NKX2-2O95096 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NKX2-2O95096 RPL23AP52-201ENST00000439311 478 ntBASIC3.99□□□□□ -1.77
NKX2-2O95096 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.99□□□□□ -1.77
NKX2-2O95096 AL512326.1-201ENST00000443050 721 ntBASIC3.99□□□□□ -1.77
NKX2-2O95096 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.99□□□□□ -1.77
NKX2-2O95096 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.99□□□□□ -1.77
NKX2-2O95096 RPL23AP24-201ENST00000458203 385 ntBASIC3.99□□□□□ -1.77
NKX2-2O95096 RNU7-136P-201ENST00000458819 69 ntBASIC3.99□□□□□ -1.77
NKX2-2O95096 SNORD108-201ENST00000459332 71 ntBASIC3.99□□□□□ -1.77
NKX2-2O95096 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.99□□□□□ -1.77
NKX2-2O95096 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.99□□□□□ -1.77
NKX2-2O95096 AC104164.2-201ENST00000496953 495 ntBASIC3.99□□□□□ -1.77
NKX2-2O95096 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.99□□□□□ -1.77
NKX2-2O95096 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.99□□□□□ -1.77
NKX2-2O95096 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.99□□□□□ -1.77
NKX2-2O95096 AC109458.1-201ENST00000508858 316 ntBASIC3.99□□□□□ -1.77
NKX2-2O95096 PPBPP1-201ENST00000510807 373 ntBASIC3.99□□□□□ -1.77
NKX2-2O95096 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.99□□□□□ -1.77
NKX2-2O95096 RNA5SP216-201ENST00000516111 123 ntBASIC3.99□□□□□ -1.77
NKX2-2O95096 CDH12P4-201ENST00000517835 295 ntBASIC3.99□□□□□ -1.77
NKX2-2O95096 CDH12P3-201ENST00000517935 295 ntBASIC3.99□□□□□ -1.77
NKX2-2O95096 CDH12P1-201ENST00000518435 295 ntBASIC3.99□□□□□ -1.77
NKX2-2O95096 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.99□□□□□ -1.77
NKX2-2O95096 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.99□□□□□ -1.77
NKX2-2O95096 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
NKX2-2O95096 MIR4330-201ENST00000579077 105 ntBASIC3.99□□□□□ -1.77
NKX2-2O95096 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.99□□□□□ -1.77
NKX2-2O95096 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.99□□□□□ -1.77
NKX2-2O95096 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.99□□□□□ -1.77
NKX2-2O95096 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.99□□□□□ -1.77
NKX2-2O95096 AL355812.1-201ENST00000603215 216 ntBASIC3.99□□□□□ -1.77
NKX2-2O95096 AC083899.3-201ENST00000603413 594 ntBASIC3.99□□□□□ -1.77
NKX2-2O95096 AC024560.3-201ENST00000608482 349 ntBASIC3.99□□□□□ -1.77
NKX2-2O95096 AC004223.4-201ENST00000612426 332 ntBASIC3.99□□□□□ -1.77
NKX2-2O95096 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.99□□□□□ -1.77
NKX2-2O95096 AC078883.4-201ENST00000623218 367 ntBASIC3.99□□□□□ -1.77
NKX2-2O95096 AC079228.1-201ENST00000624774 1049 ntBASIC3.99□□□□□ -1.77
NKX2-2O95096 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.99□□□□□ -1.77
NKX2-2O95096 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NKX2-2O95096 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.99□□□□□ -1.77
NKX2-2O95096 MTND5P3-201ENST00000438536 1800 ntBASIC3.99□□□□□ -1.77
NKX2-2O95096 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NKX2-2O95096 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
NKX2-2O95096 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.99□□□□□ -1.77
NKX2-2O95096 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NKX2-2O95096 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.98□□□□□ -1.77
NKX2-2O95096 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.98□□□□□ -1.77
NKX2-2O95096 DCAF13P1-201ENST00000495256 1330 ntBASIC3.98□□□□□ -1.77
NKX2-2O95096 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
NKX2-2O95096 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NKX2-2O95096 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.98□□□□□ -1.77
NKX2-2O95096 RPL37P18-201ENST00000411602 243 ntBASIC3.98□□□□□ -1.77
NKX2-2O95096 TPMTP2-201ENST00000414372 726 ntBASIC3.98□□□□□ -1.77
NKX2-2O95096 RPL26P29-201ENST00000415623 438 ntBASIC3.98□□□□□ -1.77
NKX2-2O95096 AL161631.1-201ENST00000417933 486 ntBASIC3.98□□□□□ -1.77
NKX2-2O95096 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.98□□□□□ -1.77
NKX2-2O95096 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.98□□□□□ -1.77
NKX2-2O95096 AL157831.1-201ENST00000426134 473 ntBASIC3.98□□□□□ -1.77
NKX2-2O95096 AC234781.2-201ENST00000426370 994 ntBASIC3.98□□□□□ -1.77
NKX2-2O95096 RWDD4P2-201ENST00000426392 563 ntBASIC3.98□□□□□ -1.77
NKX2-2O95096 RPS29P17-201ENST00000430795 166 ntBASIC3.98□□□□□ -1.77
NKX2-2O95096 AL365396.1-201ENST00000430854 671 ntBASIC3.98□□□□□ -1.77
NKX2-2O95096 ELOCP18-201ENST00000434209 337 ntBASIC3.98□□□□□ -1.77
NKX2-2O95096 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.98□□□□□ -1.77
NKX2-2O95096 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.98□□□□□ -1.77
NKX2-2O95096 MTATP6P26-201ENST00000445926 662 ntBASIC3.98□□□□□ -1.77
NKX2-2O95096 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.98□□□□□ -1.77
NKX2-2O95096 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.98□□□□□ -1.77
NKX2-2O95096 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.98□□□□□ -1.77
NKX2-2O95096 RPL23AP81-201ENST00000455252 467 ntBASIC3.98□□□□□ -1.77
NKX2-2O95096 RN7SL738P-201ENST00000470264 297 ntBASIC3.98□□□□□ -1.77
NKX2-2O95096 AC108145.1-201ENST00000503770 153 ntBASIC3.98□□□□□ -1.77
NKX2-2O95096 RNA5SP73-201ENST00000516744 108 ntBASIC3.98□□□□□ -1.77
NKX2-2O95096 RN7SKP116-201ENST00000516902 319 ntBASIC3.98□□□□□ -1.77
NKX2-2O95096 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.98□□□□□ -1.77
NKX2-2O95096 AC239860.2-201ENST00000525886 270 ntBASIC3.98□□□□□ -1.77
NKX2-2O95096 AP003385.6-201ENST00000531603 374 ntBASIC3.98□□□□□ -1.77
NKX2-2O95096 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.98□□□□□ -1.77
NKX2-2O95096 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NKX2-2O95096 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NKX2-2O95096 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.98□□□□□ -1.77
NKX2-2O95096 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.98□□□□□ -1.77
NKX2-2O95096 AC090888.1-201ENST00000561335 1141 ntBASIC3.98□□□□□ -1.77
NKX2-2O95096 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NKX2-2O95096 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.98□□□□□ -1.77
NKX2-2O95096 MIR5096-201ENST00000583713 70 ntBASIC3.98□□□□□ -1.77
NKX2-2O95096 KPNA2P3-201ENST00000584190 848 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms