Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.74□□□□□ -1.97
SNRNP200O75643 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.74□□□□□ -1.97
SNRNP200O75643 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SNRNP200O75643 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SNRNP200O75643 AL353743.4-201ENST00000422653 1547 ntBASIC2.73□□□□□ -1.97
SNRNP200O75643 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SNRNP200O75643 MIR9-1-201ENST00000385198 89 ntBASIC2.73□□□□□ -1.97
SNRNP200O75643 AC069218.2-201ENST00000411665 344 ntBASIC2.73□□□□□ -1.97
SNRNP200O75643 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC2.73□□□□□ -1.97
SNRNP200O75643 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.73□□□□□ -1.97
SNRNP200O75643 HMGB1P25-201ENST00000468402 607 ntBASIC2.73□□□□□ -1.97
SNRNP200O75643 AC003982.1-202ENST00000469928 248 ntBASIC2.73□□□□□ -1.97
SNRNP200O75643 UBE2DNL-203ENST00000474922 222 ntBASIC2.73□□□□□ -1.97
SNRNP200O75643 AC078785.3-201ENST00000476607 425 ntBASIC2.73□□□□□ -1.97
SNRNP200O75643 RPS3AP43-201ENST00000479743 781 ntBASIC2.73□□□□□ -1.97
SNRNP200O75643 AP004217.1-201ENST00000480579 346 ntBASIC2.73□□□□□ -1.97
SNRNP200O75643 AC022080.3-201ENST00000544433 482 ntBASIC2.73□□□□□ -1.97
SNRNP200O75643 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.73□□□□□ -1.97
SNRNP200O75643 AC011492.1-201ENST00000600023 315 ntBASIC2.73□□□□□ -1.97
SNRNP200O75643 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.73□□□□□ -1.97
SNRNP200O75643 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SNRNP200O75643 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
SNRNP200O75643 AC005183.1-201ENST00000603687 1979 ntBASIC2.73□□□□□ -1.97
SNRNP200O75643 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SNRNP200O75643 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SNRNP200O75643 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SNRNP200O75643 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
SNRNP200O75643 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.72□□□□□ -1.97
SNRNP200O75643 RPL7P53-201ENST00000421245 739 ntBASIC2.72□□□□□ -1.97
SNRNP200O75643 AC019097.1-201ENST00000424783 735 ntBASIC2.72□□□□□ -1.97
SNRNP200O75643 MTND4LP13-201ENST00000425022 298 ntBASIC2.72□□□□□ -1.97
SNRNP200O75643 AC087499.2-201ENST00000432861 149 ntBASIC2.72□□□□□ -1.97
SNRNP200O75643 MTCO1P52-201ENST00000433928 531 ntBASIC2.72□□□□□ -1.97
SNRNP200O75643 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.72□□□□□ -1.97
SNRNP200O75643 UQCRHP3-201ENST00000451503 251 ntBASIC2.72□□□□□ -1.97
SNRNP200O75643 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.72□□□□□ -1.97
SNRNP200O75643 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SNRNP200O75643 SNORA70.14-201ENST00000516205 110 ntBASIC2.72□□□□□ -1.97
SNRNP200O75643 AC090136.1-201ENST00000520009 240 ntBASIC2.72□□□□□ -1.97
SNRNP200O75643 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.72□□□□□ -1.97
SNRNP200O75643 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC2.72□□□□□ -1.97
SNRNP200O75643 AL451007.1-201ENST00000595491 289 ntBASIC2.72□□□□□ -1.97
SNRNP200O75643 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC2.72□□□□□ -1.97
SNRNP200O75643 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.72□□□□□ -1.97
SNRNP200O75643 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SNRNP200O75643 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SNRNP200O75643 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
SNRNP200O75643 RNA5SP21-201ENST00000410917 96 ntBASIC2.72□□□□□ -1.97
SNRNP200O75643 AC105402.2-201ENST00000438503 358 ntBASIC2.72□□□□□ -1.97
SNRNP200O75643 CCRL1P1-201ENST00000449542 1053 ntBASIC2.72□□□□□ -1.97
SNRNP200O75643 RPL21P41-201ENST00000459863 264 ntBASIC2.72□□□□□ -1.97
SNRNP200O75643 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC2.72□□□□□ -1.97
SNRNP200O75643 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC2.72□□□□□ -1.97
SNRNP200O75643 MIR4319-201ENST00000577285 85 ntBASIC2.72□□□□□ -1.97
SNRNP200O75643 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.72□□□□□ -1.97
SNRNP200O75643 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.72□□□□□ -1.97
SNRNP200O75643 AF131215.7-201ENST00000602443 707 ntBASIC2.72□□□□□ -1.97
SNRNP200O75643 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC2.72□□□□□ -1.97
SNRNP200O75643 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.72□□□□□ -1.97
SNRNP200O75643 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.72□□□□□ -1.97
SNRNP200O75643 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
SNRNP200O75643 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
SNRNP200O75643 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SNRNP200O75643 AC011155.1-201ENST00000316512 456 ntBASIC2.71□□□□□ -1.98
SNRNP200O75643 RNU1-112P-201ENST00000364401 164 ntBASIC2.71□□□□□ -1.98
SNRNP200O75643 U3.26-201ENST00000391236 204 ntBASIC2.71□□□□□ -1.98
SNRNP200O75643 OR2AS1P-201ENST00000427827 319 ntBASIC2.71□□□□□ -1.98
SNRNP200O75643 AC008065.1-201ENST00000428525 348 ntBASIC2.71□□□□□ -1.98
SNRNP200O75643 RPL21P40-201ENST00000428586 483 ntBASIC2.71□□□□□ -1.98
SNRNP200O75643 ELOCP10-201ENST00000440624 327 ntBASIC2.71□□□□□ -1.98
SNRNP200O75643 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.71□□□□□ -1.98
SNRNP200O75643 AC140076.1-201ENST00000449897 361 ntBASIC2.71□□□□□ -1.98
SNRNP200O75643 AP001086.1-201ENST00000494882 321 ntBASIC2.71□□□□□ -1.98
SNRNP200O75643 AC118282.1-201ENST00000506408 765 ntBASIC2.71□□□□□ -1.98
SNRNP200O75643 AC119751.1-201ENST00000513357 765 ntBASIC2.71□□□□□ -1.98
SNRNP200O75643 AC010265.1-201ENST00000513509 211 ntBASIC2.71□□□□□ -1.98
SNRNP200O75643 SCARNA13-201ENST00000516672 275 ntBASIC2.71□□□□□ -1.98
SNRNP200O75643 RN7SKP60-201ENST00000516985 239 ntBASIC2.71□□□□□ -1.98
SNRNP200O75643 RN7SKP289-201ENST00000517244 295 ntBASIC2.71□□□□□ -1.98
SNRNP200O75643 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC2.71□□□□□ -1.98
SNRNP200O75643 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.71□□□□□ -1.98
SNRNP200O75643 ELOCP34-201ENST00000604436 327 ntBASIC2.71□□□□□ -1.98
SNRNP200O75643 AC000123.2-201ENST00000623124 461 ntBASIC2.71□□□□□ -1.98
SNRNP200O75643 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
SNRNP200O75643 FRG1DP-201ENST00000635586 771 ntBASIC2.71□□□□□ -1.98
SNRNP200O75643 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC2.71□□□□□ -1.98
SNRNP200O75643 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SNRNP200O75643 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.71□□□□□ -1.98
SNRNP200O75643 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
SNRNP200O75643 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SNRNP200O75643 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SNRNP200O75643 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.71□□□□□ -1.98
SNRNP200O75643 RNU6-328P-201ENST00000390887 106 ntBASIC2.71□□□□□ -1.98
SNRNP200O75643 RN7SKP222-201ENST00000410651 315 ntBASIC2.71□□□□□ -1.98
SNRNP200O75643 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.71□□□□□ -1.98
SNRNP200O75643 AC009237.5-201ENST00000414271 501 ntBASIC2.71□□□□□ -1.98
SNRNP200O75643 MTND2P2-201ENST00000434633 945 ntBASIC2.71□□□□□ -1.98
SNRNP200O75643 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.71□□□□□ -1.98
SNRNP200O75643 AC107083.1-201ENST00000439643 279 ntBASIC2.71□□□□□ -1.98
SNRNP200O75643 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms