Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC097499.1-201ENST00000444277 208 ntBASIC4.33□□□□□ -1.72
SMAD6O43541 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SMAD6O43541 CDC42P1-201ENST00000456658 548 ntBASIC4.33□□□□□ -1.72
SMAD6O43541 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.33□□□□□ -1.72
SMAD6O43541 AP000926.1-201ENST00000479573 241 ntBASIC4.33□□□□□ -1.72
SMAD6O43541 GAPDHP36-201ENST00000480688 918 ntBASIC4.33□□□□□ -1.72
SMAD6O43541 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.33□□□□□ -1.72
SMAD6O43541 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SMAD6O43541 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.33□□□□□ -1.72
SMAD6O43541 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.33□□□□□ -1.72
SMAD6O43541 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.33□□□□□ -1.72
SMAD6O43541 CBX3P3-201ENST00000508108 532 ntBASIC4.33□□□□□ -1.72
SMAD6O43541 AC079140.3-201ENST00000511111 550 ntBASIC4.33□□□□□ -1.72
SMAD6O43541 RNA5SP73-201ENST00000516744 108 ntBASIC4.33□□□□□ -1.72
SMAD6O43541 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.33□□□□□ -1.72
SMAD6O43541 AC134698.5-201ENST00000519444 336 ntBASIC4.33□□□□□ -1.72
SMAD6O43541 MTND4LP18-201ENST00000526864 291 ntBASIC4.33□□□□□ -1.72
SMAD6O43541 AP002963.1-201ENST00000530590 184 ntBASIC4.33□□□□□ -1.72
SMAD6O43541 AP000873.5-201ENST00000533906 236 ntBASIC4.33□□□□□ -1.72
SMAD6O43541 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.33□□□□□ -1.72
SMAD6O43541 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.33□□□□□ -1.72
SMAD6O43541 AC006064.5-201ENST00000541782 248 ntBASIC4.33□□□□□ -1.72
SMAD6O43541 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SMAD6O43541 AC135001.1-201ENST00000544546 283 ntBASIC4.33□□□□□ -1.72
SMAD6O43541 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.33□□□□□ -1.72
SMAD6O43541 CCNG2P1-201ENST00000549521 1000 ntBASIC4.33□□□□□ -1.72
SMAD6O43541 AC068135.2-201ENST00000569293 1028 ntBASIC4.33□□□□□ -1.72
SMAD6O43541 RN7SL600P-201ENST00000581811 299 ntBASIC4.33□□□□□ -1.72
SMAD6O43541 SS18L2P2-201ENST00000583960 235 ntBASIC4.33□□□□□ -1.72
SMAD6O43541 AC107982.3-201ENST00000584957 985 ntBASIC4.33□□□□□ -1.72
SMAD6O43541 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.33□□□□□ -1.72
SMAD6O43541 SLC25A36P1-201ENST00000590111 465 ntBASIC4.33□□□□□ -1.72
SMAD6O43541 U73023.1-201ENST00000603134 700 ntBASIC4.33□□□□□ -1.72
SMAD6O43541 AC020910.2-201ENST00000603635 610 ntBASIC4.33□□□□□ -1.72
SMAD6O43541 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.33□□□□□ -1.72
SMAD6O43541 AC012557.1-201ENST00000607115 611 ntBASIC4.33□□□□□ -1.72
SMAD6O43541 AC011374.2-201ENST00000607135 526 ntBASIC4.33□□□□□ -1.72
SMAD6O43541 FAM27D1-201ENST00000612308 341 ntBASIC4.33□□□□□ -1.72
SMAD6O43541 AC009509.4-201ENST00000619202 509 ntBASIC4.33□□□□□ -1.72
SMAD6O43541 AL607023.1-201ENST00000620045 248 ntBASIC4.33□□□□□ -1.72
SMAD6O43541 AC008443.7-201ENST00000622195 246 ntBASIC4.33□□□□□ -1.72
SMAD6O43541 AC016717.3-201ENST00000624730 554 ntBASIC4.33□□□□□ -1.72
SMAD6O43541 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.33□□□□□ -1.72
SMAD6O43541 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.33□□□□□ -1.72
SMAD6O43541 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
SMAD6O43541 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.33□□□□□ -1.72
SMAD6O43541 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SMAD6O43541 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.32□□□□□ -1.72
SMAD6O43541 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.32□□□□□ -1.72
SMAD6O43541 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SMAD6O43541 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.32□□□□□ -1.72
SMAD6O43541 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SMAD6O43541 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SMAD6O43541 U3.4-201ENST00000363352 213 ntBASIC4.32□□□□□ -1.72
SMAD6O43541 RNU6-1283P-201ENST00000365314 105 ntBASIC4.32□□□□□ -1.72
SMAD6O43541 Y_RNA.359-201ENST00000365498 102 ntBASIC4.32□□□□□ -1.72
SMAD6O43541 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.32□□□□□ -1.72
SMAD6O43541 SNORA70C-201ENST00000384538 135 ntBASIC4.32□□□□□ -1.72
SMAD6O43541 HDGFP1-201ENST00000405943 252 ntBASIC4.32□□□□□ -1.72
SMAD6O43541 RN7SKP142-201ENST00000411236 328 ntBASIC4.32□□□□□ -1.72
SMAD6O43541 RNA5SP498-201ENST00000411342 120 ntBASIC4.32□□□□□ -1.72
SMAD6O43541 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.32□□□□□ -1.72
SMAD6O43541 AC013404.1-201ENST00000413068 249 ntBASIC4.32□□□□□ -1.72
SMAD6O43541 AC105402.1-201ENST00000413336 545 ntBASIC4.32□□□□□ -1.72
SMAD6O43541 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.32□□□□□ -1.72
SMAD6O43541 EIF4EP1-201ENST00000422311 642 ntBASIC4.32□□□□□ -1.72
SMAD6O43541 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.32□□□□□ -1.72
SMAD6O43541 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.32□□□□□ -1.72
SMAD6O43541 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.32□□□□□ -1.72
SMAD6O43541 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.32□□□□□ -1.72
SMAD6O43541 BTF3P10-201ENST00000433415 495 ntBASIC4.32□□□□□ -1.72
SMAD6O43541 AC092170.1-201ENST00000440211 356 ntBASIC4.32□□□□□ -1.72
SMAD6O43541 AC092641.1-201ENST00000440229 772 ntBASIC4.32□□□□□ -1.72
SMAD6O43541 RPL21P134-201ENST00000453468 483 ntBASIC4.32□□□□□ -1.72
SMAD6O43541 AL035407.2-201ENST00000454090 378 ntBASIC4.32□□□□□ -1.72
SMAD6O43541 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.32□□□□□ -1.72
SMAD6O43541 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC4.32□□□□□ -1.72
SMAD6O43541 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.32□□□□□ -1.72
SMAD6O43541 RPL7P19-201ENST00000469948 618 ntBASIC4.32□□□□□ -1.72
SMAD6O43541 AC004069.2-201ENST00000505438 1114 ntBASIC4.32□□□□□ -1.72
SMAD6O43541 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.32□□□□□ -1.72
SMAD6O43541 AL592156.1-201ENST00000508758 304 ntBASIC4.32□□□□□ -1.72
SMAD6O43541 AC109458.1-201ENST00000508858 316 ntBASIC4.32□□□□□ -1.72
SMAD6O43541 KCTD9P2-201ENST00000512203 1013 ntBASIC4.32□□□□□ -1.72
SMAD6O43541 AC008837.2-201ENST00000513076 418 ntBASIC4.32□□□□□ -1.72
SMAD6O43541 PRELID3BP4-201ENST00000515476 571 ntBASIC4.32□□□□□ -1.72
SMAD6O43541 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.32□□□□□ -1.72
SMAD6O43541 AL139174.1-201ENST00000531489 886 ntBASIC4.32□□□□□ -1.72
SMAD6O43541 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.32□□□□□ -1.72
SMAD6O43541 AC012435.1-202ENST00000568772 240 ntBASIC4.32□□□□□ -1.72
SMAD6O43541 MTCO1P40-201ENST00000574371 625 ntBASIC4.32□□□□□ -1.72
SMAD6O43541 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.32□□□□□ -1.72
SMAD6O43541 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SMAD6O43541 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.32□□□□□ -1.72
SMAD6O43541 AC115621.1-201ENST00000604653 858 ntBASIC4.32□□□□□ -1.72
SMAD6O43541 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SMAD6O43541 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SMAD6O43541 AC008083.4-201ENST00000615076 444 ntBASIC4.32□□□□□ -1.72
SMAD6O43541 AC121761.2-201ENST00000617300 689 ntBASIC4.32□□□□□ -1.72
SMAD6O43541 AP004607.9-201ENST00000618202 316 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms