Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CLDN3O15551 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLDN3O15551 RNA5SP171-201ENST00000391071 115 ntBASIC3.86□□□□□ -1.79
CLDN3O15551 MIR1250-201ENST00000408098 113 ntBASIC3.86□□□□□ -1.79
CLDN3O15551 RNU6-77P-201ENST00000410554 91 ntBASIC3.86□□□□□ -1.79
CLDN3O15551 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.86□□□□□ -1.79
CLDN3O15551 PAICSP7-201ENST00000419829 962 ntBASIC3.86□□□□□ -1.79
CLDN3O15551 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.86□□□□□ -1.79
CLDN3O15551 AC005517.2-201ENST00000424673 553 ntBASIC3.86□□□□□ -1.79
CLDN3O15551 AC017083.1-201ENST00000428093 483 ntBASIC3.86□□□□□ -1.79
CLDN3O15551 AL365396.1-201ENST00000430854 671 ntBASIC3.86□□□□□ -1.79
CLDN3O15551 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CLDN3O15551 HMGB1P45-201ENST00000435986 653 ntBASIC3.86□□□□□ -1.79
CLDN3O15551 RAB11AP1-201ENST00000442978 646 ntBASIC3.86□□□□□ -1.79
CLDN3O15551 RPS29P31-201ENST00000446147 164 ntBASIC3.86□□□□□ -1.79
CLDN3O15551 AC005002.1-201ENST00000447458 540 ntBASIC3.86□□□□□ -1.79
CLDN3O15551 CEACAMP4-201ENST00000457676 421 ntBASIC3.86□□□□□ -1.79
CLDN3O15551 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.86□□□□□ -1.79
CLDN3O15551 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.86□□□□□ -1.79
CLDN3O15551 RPL9P32-201ENST00000464118 620 ntBASIC3.86□□□□□ -1.79
CLDN3O15551 NCOR1P1-202ENST00000486162 291 ntBASIC3.86□□□□□ -1.79
CLDN3O15551 AP001086.1-201ENST00000494882 321 ntBASIC3.86□□□□□ -1.79
CLDN3O15551 TRAV31-201ENST00000502780 342 ntBASIC3.86□□□□□ -1.79
CLDN3O15551 AC112518.2-201ENST00000508565 425 ntBASIC3.86□□□□□ -1.79
CLDN3O15551 MTCO1P30-201ENST00000515244 580 ntBASIC3.86□□□□□ -1.79
CLDN3O15551 RNU2-27P-201ENST00000516185 142 ntBASIC3.86□□□□□ -1.79
CLDN3O15551 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.86□□□□□ -1.79
CLDN3O15551 AC023824.3-201ENST00000569003 562 ntBASIC3.86□□□□□ -1.79
CLDN3O15551 VN1R9P-201ENST00000614184 867 ntBASIC3.86□□□□□ -1.79
CLDN3O15551 AL357559.1-201ENST00000622228 274 ntBASIC3.86□□□□□ -1.79
CLDN3O15551 AC097460.3-201ENST00000623099 442 ntBASIC3.86□□□□□ -1.79
CLDN3O15551 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.86□□□□□ -1.79
CLDN3O15551 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CLDN3O15551 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.86□□□□□ -1.79
CLDN3O15551 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CLDN3O15551 MTCO1P6-201ENST00000481192 1384 ntBASIC3.86□□□□□ -1.79
CLDN3O15551 CEP170P1-201ENST00000502249 4587 ntBASIC3.86□□□□□ -1.79
CLDN3O15551 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.86□□□□□ -1.79
CLDN3O15551 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLDN3O15551 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLDN3O15551 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CLDN3O15551 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.85□□□□□ -1.79
CLDN3O15551 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CLDN3O15551 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLDN3O15551 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CLDN3O15551 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.85□□□□□ -1.79
CLDN3O15551 RNU6-1151P-201ENST00000384684 107 ntBASIC3.85□□□□□ -1.79
CLDN3O15551 RN7SKP53-201ENST00000411337 315 ntBASIC3.85□□□□□ -1.79
CLDN3O15551 AMD1P2-201ENST00000412936 992 ntBASIC3.85□□□□□ -1.79
CLDN3O15551 MTND4P22-201ENST00000413116 1169 ntBASIC3.85□□□□□ -1.79
CLDN3O15551 CRYBB2P1-203ENST00000415709 538 ntBASIC3.85□□□□□ -1.79
CLDN3O15551 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.85□□□□□ -1.79
CLDN3O15551 BX842559.1-201ENST00000419615 532 ntBASIC3.85□□□□□ -1.79
CLDN3O15551 AL606495.1-201ENST00000422100 813 ntBASIC3.85□□□□□ -1.79
CLDN3O15551 RPL17P35-201ENST00000432217 549 ntBASIC3.85□□□□□ -1.79
CLDN3O15551 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.85□□□□□ -1.79
CLDN3O15551 AC010881.1-201ENST00000433830 235 ntBASIC3.85□□□□□ -1.79
CLDN3O15551 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.85□□□□□ -1.79
CLDN3O15551 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.85□□□□□ -1.79
CLDN3O15551 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.85□□□□□ -1.79
CLDN3O15551 AL929288.2-201ENST00000446368 407 ntBASIC3.85□□□□□ -1.79
CLDN3O15551 RBMY2UP-201ENST00000453474 324 ntBASIC3.85□□□□□ -1.79
CLDN3O15551 RPS15AP1-201ENST00000457423 391 ntBASIC3.85□□□□□ -1.79
CLDN3O15551 RN7SL594P-201ENST00000470590 287 ntBASIC3.85□□□□□ -1.79
CLDN3O15551 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.85□□□□□ -1.79
CLDN3O15551 AC092451.1-201ENST00000480211 153 ntBASIC3.85□□□□□ -1.79
CLDN3O15551 OR5H3P-201ENST00000502817 919 ntBASIC3.85□□□□□ -1.79
CLDN3O15551 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CLDN3O15551 SLC25A15P5-201ENST00000508033 253 ntBASIC3.85□□□□□ -1.79
CLDN3O15551 DUXAP2-201ENST00000519198 589 ntBASIC3.85□□□□□ -1.79
CLDN3O15551 OR4R3P-201ENST00000525084 838 ntBASIC3.85□□□□□ -1.79
CLDN3O15551 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.85□□□□□ -1.79
CLDN3O15551 AP004242.1-201ENST00000533701 349 ntBASIC3.85□□□□□ -1.79
CLDN3O15551 AC092851.1-201ENST00000535964 478 ntBASIC3.85□□□□□ -1.79
CLDN3O15551 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.85□□□□□ -1.79
CLDN3O15551 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.85□□□□□ -1.79
CLDN3O15551 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.85□□□□□ -1.79
CLDN3O15551 MIR4738-201ENST00000579134 87 ntBASIC3.85□□□□□ -1.79
CLDN3O15551 AC021851.1-201ENST00000608537 1082 ntBASIC3.85□□□□□ -1.79
CLDN3O15551 AL392088.2-201ENST00000637607 285 ntBASIC3.85□□□□□ -1.79
CLDN3O15551 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.85□□□□□ -1.79
CLDN3O15551 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
CLDN3O15551 OTUD4P1-201ENST00000237841 3067 ntBASIC3.84□□□□□ -1.79
CLDN3O15551 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CLDN3O15551 HSPA8P1-201ENST00000425843 1833 ntBASIC3.84□□□□□ -1.79
CLDN3O15551 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CLDN3O15551 FRG1CP-201ENST00000358464 769 ntBASIC3.84□□□□□ -1.79
CLDN3O15551 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
CLDN3O15551 RHEBP3-201ENST00000411920 351 ntBASIC3.84□□□□□ -1.79
CLDN3O15551 RPL30P2-201ENST00000414021 291 ntBASIC3.84□□□□□ -1.79
CLDN3O15551 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.84□□□□□ -1.79
CLDN3O15551 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.84□□□□□ -1.79
CLDN3O15551 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.84□□□□□ -1.79
CLDN3O15551 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.84□□□□□ -1.79
CLDN3O15551 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.84□□□□□ -1.79
CLDN3O15551 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.84□□□□□ -1.79
CLDN3O15551 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.84□□□□□ -1.79
CLDN3O15551 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.84□□□□□ -1.79
CLDN3O15551 RPS26P56-201ENST00000444468 240 ntBASIC3.84□□□□□ -1.79
CLDN3O15551 AL358232.1-201ENST00000448030 501 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms