Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.77□□□□□ -1.65
FOXN3O00409 USP9YP5-201ENST00000511770 630 ntBASIC4.77□□□□□ -1.65
FOXN3O00409 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.77□□□□□ -1.65
FOXN3O00409 MTND5P13-201ENST00000513046 1079 ntBASIC4.77□□□□□ -1.65
FOXN3O00409 HIGD1AP3-201ENST00000515857 278 ntBASIC4.77□□□□□ -1.65
FOXN3O00409 AC008802.1-201ENST00000519121 791 ntBASIC4.77□□□□□ -1.65
FOXN3O00409 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.77□□□□□ -1.65
FOXN3O00409 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.77□□□□□ -1.65
FOXN3O00409 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.77□□□□□ -1.65
FOXN3O00409 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.77□□□□□ -1.65
FOXN3O00409 AP000827.1-201ENST00000527814 258 ntBASIC4.77□□□□□ -1.65
FOXN3O00409 AL139174.1-201ENST00000531489 886 ntBASIC4.77□□□□□ -1.65
FOXN3O00409 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.77□□□□□ -1.65
FOXN3O00409 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.77□□□□□ -1.65
FOXN3O00409 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
FOXN3O00409 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.77□□□□□ -1.65
FOXN3O00409 ROCK1P1-201ENST00000573767 549 ntBASIC4.77□□□□□ -1.65
FOXN3O00409 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.77□□□□□ -1.65
FOXN3O00409 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
FOXN3O00409 AC104785.1-201ENST00000603220 588 ntBASIC4.77□□□□□ -1.65
FOXN3O00409 AL133243.1-201ENST00000614487 366 ntBASIC4.77□□□□□ -1.65
FOXN3O00409 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
FOXN3O00409 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.77□□□□□ -1.65
FOXN3O00409 MIR7703-201ENST00000620784 77 ntBASIC4.77□□□□□ -1.65
FOXN3O00409 AC007546.2-201ENST00000623996 360 ntBASIC4.77□□□□□ -1.65
FOXN3O00409 AL049536.1-201ENST00000625043 744 ntBASIC4.77□□□□□ -1.65
FOXN3O00409 CYP3A51P-201ENST00000633513 256 ntBASIC4.77□□□□□ -1.65
FOXN3O00409 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.77□□□□□ -1.65
FOXN3O00409 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.77□□□□□ -1.65
FOXN3O00409 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.77□□□□□ -1.65
FOXN3O00409 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
FOXN3O00409 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
FOXN3O00409 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.77□□□□□ -1.65
FOXN3O00409 MTND4P5-201ENST00000435821 1374 ntBASIC4.77□□□□□ -1.65
FOXN3O00409 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.77□□□□□ -1.65
FOXN3O00409 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
FOXN3O00409 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.76□□□□□ -1.65
FOXN3O00409 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
FOXN3O00409 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.76□□□□□ -1.65
FOXN3O00409 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
FOXN3O00409 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
FOXN3O00409 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
FOXN3O00409 RNU5F-7P-201ENST00000363696 115 ntBASIC4.76□□□□□ -1.65
FOXN3O00409 RNU6-289P-201ENST00000364093 107 ntBASIC4.76□□□□□ -1.65
FOXN3O00409 RNVU1-6-201ENST00000364688 164 ntBASIC4.76□□□□□ -1.65
FOXN3O00409 RNA5SP22-201ENST00000365393 109 ntBASIC4.76□□□□□ -1.65
FOXN3O00409 U3.15-201ENST00000365398 212 ntBASIC4.76□□□□□ -1.65
FOXN3O00409 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
FOXN3O00409 TPMTP3-201ENST00000411928 735 ntBASIC4.76□□□□□ -1.65
FOXN3O00409 RPL7P8-201ENST00000411964 730 ntBASIC4.76□□□□□ -1.65
FOXN3O00409 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.76□□□□□ -1.65
FOXN3O00409 SNRPFP1-201ENST00000414761 252 ntBASIC4.76□□□□□ -1.65
FOXN3O00409 AL139095.3-201ENST00000419672 1203 ntBASIC4.76□□□□□ -1.65
FOXN3O00409 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.76□□□□□ -1.65
FOXN3O00409 CENPIP1-201ENST00000425713 902 ntBASIC4.76□□□□□ -1.65
FOXN3O00409 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.76□□□□□ -1.65
FOXN3O00409 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.76□□□□□ -1.65
FOXN3O00409 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.76□□□□□ -1.65
FOXN3O00409 MTND1P30-201ENST00000441241 901 ntBASIC4.76□□□□□ -1.65
FOXN3O00409 AL831737.1-201ENST00000441288 271 ntBASIC4.76□□□□□ -1.65
FOXN3O00409 MTCO2P7-201ENST00000446518 666 ntBASIC4.76□□□□□ -1.65
FOXN3O00409 AC005297.2-201ENST00000450430 606 ntBASIC4.76□□□□□ -1.65
FOXN3O00409 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
FOXN3O00409 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.76□□□□□ -1.65
FOXN3O00409 ARL4AP1-201ENST00000503220 705 ntBASIC4.76□□□□□ -1.65
FOXN3O00409 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.76□□□□□ -1.65
FOXN3O00409 MTND5P4-201ENST00000514978 288 ntBASIC4.76□□□□□ -1.65
FOXN3O00409 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.76□□□□□ -1.65
FOXN3O00409 IGKV2D-36-201ENST00000518643 226 ntBASIC4.76□□□□□ -1.65
FOXN3O00409 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4.76□□□□□ -1.65
FOXN3O00409 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.76□□□□□ -1.65
FOXN3O00409 AC100770.1-201ENST00000532310 322 ntBASIC4.76□□□□□ -1.65
FOXN3O00409 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
FOXN3O00409 AP006289.1-201ENST00000538089 277 ntBASIC4.76□□□□□ -1.65
FOXN3O00409 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.76□□□□□ -1.65
FOXN3O00409 RPL23AP97-201ENST00000568955 471 ntBASIC4.76□□□□□ -1.65
FOXN3O00409 AC069061.3-201ENST00000582254 823 ntBASIC4.76□□□□□ -1.65
FOXN3O00409 DHX40P1-201ENST00000588725 1412 ntBASIC4.76□□□□□ -1.65
FOXN3O00409 AC115286.1-201ENST00000604298 434 ntBASIC4.76□□□□□ -1.65
FOXN3O00409 AP003117.2-201ENST00000606010 545 ntBASIC4.76□□□□□ -1.65
FOXN3O00409 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.76□□□□□ -1.65
FOXN3O00409 AC103710.4-201ENST00000609301 899 ntBASIC4.76□□□□□ -1.65
FOXN3O00409 Mico1.1-201ENST00000611698 204 ntBASIC4.76□□□□□ -1.65
FOXN3O00409 AL161616.1-201ENST00000611867 286 ntBASIC4.76□□□□□ -1.65
FOXN3O00409 AC100827.5-201ENST00000615883 426 ntBASIC4.76□□□□□ -1.65
FOXN3O00409 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
FOXN3O00409 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.76□□□□□ -1.65
FOXN3O00409 AC127502.3-201ENST00000636170 1206 ntBASIC4.76□□□□□ -1.65
FOXN3O00409 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.76□□□□□ -1.65
FOXN3O00409 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
FOXN3O00409 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.76□□□□□ -1.65
FOXN3O00409 AC011978.2-201ENST00000569835 2054 ntBASIC4.76□□□□□ -1.65
FOXN3O00409 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
FOXN3O00409 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
FOXN3O00409 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.75□□□□□ -1.65
FOXN3O00409 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.75□□□□□ -1.65
FOXN3O00409 GDI2P1-201ENST00000429312 1336 ntBASIC4.75□□□□□ -1.65
FOXN3O00409 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
FOXN3O00409 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.75□□□□□ -1.65
FOXN3O00409 AL022578.1-201ENST00000439330 1433 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms