Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SLC28A1O00337 AC130650.2-201ENST00000618736 2403 ntBASIC3.66□□□□□ -1.82
SLC28A1O00337 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SLC28A1O00337 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SLC28A1O00337 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SLC28A1O00337 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SLC28A1O00337 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
SLC28A1O00337 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SLC28A1O00337 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.65□□□□□ -1.82
SLC28A1O00337 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
SLC28A1O00337 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.65□□□□□ -1.82
SLC28A1O00337 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.65□□□□□ -1.82
SLC28A1O00337 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SLC28A1O00337 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SLC28A1O00337 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SLC28A1O00337 AL157700.1-201ENST00000561973 1432 ntBASIC3.65□□□□□ -1.83
SLC28A1O00337 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
SLC28A1O00337 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
SLC28A1O00337 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
SLC28A1O00337 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.65□□□□□ -1.83
SLC28A1O00337 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
SLC28A1O00337 RNU6-339P-201ENST00000384310 107 ntBASIC3.65□□□□□ -1.83
SLC28A1O00337 MIR620-201ENST00000385232 95 ntBASIC3.65□□□□□ -1.83
SLC28A1O00337 RPL21P65-201ENST00000406094 466 ntBASIC3.65□□□□□ -1.83
SLC28A1O00337 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.65□□□□□ -1.83
SLC28A1O00337 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.65□□□□□ -1.83
SLC28A1O00337 AC092634.6-201ENST00000418558 192 ntBASIC3.65□□□□□ -1.83
SLC28A1O00337 AC244098.2-201ENST00000422068 99 ntBASIC3.65□□□□□ -1.83
SLC28A1O00337 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.65□□□□□ -1.83
SLC28A1O00337 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.65□□□□□ -1.83
SLC28A1O00337 AL035410.1-201ENST00000427409 427 ntBASIC3.65□□□□□ -1.83
SLC28A1O00337 RPL31P54-201ENST00000429803 370 ntBASIC3.65□□□□□ -1.83
SLC28A1O00337 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.65□□□□□ -1.83
SLC28A1O00337 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.65□□□□□ -1.83
SLC28A1O00337 Z74696.2-201ENST00000436514 498 ntBASIC3.65□□□□□ -1.83
SLC28A1O00337 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.65□□□□□ -1.83
SLC28A1O00337 SNORA71B-202ENST00000439232 272 ntBASIC3.65□□□□□ -1.83
SLC28A1O00337 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.65□□□□□ -1.83
SLC28A1O00337 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.65□□□□□ -1.83
SLC28A1O00337 RPL5P32-201ENST00000454085 879 ntBASIC3.65□□□□□ -1.83
SLC28A1O00337 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.65□□□□□ -1.83
SLC28A1O00337 RPS7P7-201ENST00000463499 571 ntBASIC3.65□□□□□ -1.83
SLC28A1O00337 AL136126.1-201ENST00000473603 402 ntBASIC3.65□□□□□ -1.83
SLC28A1O00337 SYPL1P1-201ENST00000473622 768 ntBASIC3.65□□□□□ -1.83
SLC28A1O00337 AC104982.1-201ENST00000478775 574 ntBASIC3.65□□□□□ -1.83
SLC28A1O00337 VPS26AP1-201ENST00000483197 979 ntBASIC3.65□□□□□ -1.83
SLC28A1O00337 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
SLC28A1O00337 OR5H5P-201ENST00000503164 928 ntBASIC3.65□□□□□ -1.83
SLC28A1O00337 AC084024.2-201ENST00000503480 791 ntBASIC3.65□□□□□ -1.83
SLC28A1O00337 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.65□□□□□ -1.83
SLC28A1O00337 MTCYBP37-201ENST00000510642 1133 ntBASIC3.65□□□□□ -1.83
SLC28A1O00337 MTCO3P44-201ENST00000510977 541 ntBASIC3.65□□□□□ -1.83
SLC28A1O00337 RAC1P2-201ENST00000511164 579 ntBASIC3.65□□□□□ -1.83
SLC28A1O00337 USP9YP5-201ENST00000511770 630 ntBASIC3.65□□□□□ -1.83
SLC28A1O00337 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.65□□□□□ -1.83
SLC28A1O00337 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.65□□□□□ -1.83
SLC28A1O00337 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.65□□□□□ -1.83
SLC28A1O00337 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SLC28A1O00337 AP003385.6-201ENST00000531603 374 ntBASIC3.65□□□□□ -1.83
SLC28A1O00337 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.65□□□□□ -1.83
SLC28A1O00337 AC006960.3-201ENST00000561845 705 ntBASIC3.65□□□□□ -1.83
SLC28A1O00337 SULT1C2P1-202ENST00000562418 459 ntBASIC3.65□□□□□ -1.83
SLC28A1O00337 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.65□□□□□ -1.83
SLC28A1O00337 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.65□□□□□ -1.83
SLC28A1O00337 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.65□□□□□ -1.83
SLC28A1O00337 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.65□□□□□ -1.83
SLC28A1O00337 AC097504.2-201ENST00000608088 454 ntBASIC3.65□□□□□ -1.83
SLC28A1O00337 AL445423.1-201ENST00000609941 536 ntBASIC3.65□□□□□ -1.83
SLC28A1O00337 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.65□□□□□ -1.83
SLC28A1O00337 AC005962.2-201ENST00000611427 652 ntBASIC3.65□□□□□ -1.83
SLC28A1O00337 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
SLC28A1O00337 MIR6716-201ENST00000613413 80 ntBASIC3.65□□□□□ -1.83
SLC28A1O00337 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.65□□□□□ -1.83
SLC28A1O00337 MFSD8-245ENST00000641743 948 ntBASIC3.65□□□□□ -1.83
SLC28A1O00337 MAPK10-372ENST00000641954 3413 ntBASIC3.65□□□□□ -1.83
SLC28A1O00337 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SLC28A1O00337 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.65□□□□□ -1.83
SLC28A1O00337 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
SLC28A1O00337 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SLC28A1O00337 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.64□□□□□ -1.83
SLC28A1O00337 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SLC28A1O00337 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SLC28A1O00337 RNU6-492P-201ENST00000363035 104 ntBASIC3.64□□□□□ -1.83
SLC28A1O00337 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.64□□□□□ -1.83
SLC28A1O00337 RNU6-224P-201ENST00000384055 107 ntBASIC3.64□□□□□ -1.83
SLC28A1O00337 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SLC28A1O00337 EI24P1-201ENST00000416584 867 ntBASIC3.64□□□□□ -1.83
SLC28A1O00337 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.64□□□□□ -1.83
SLC28A1O00337 RPL7P53-201ENST00000421245 739 ntBASIC3.64□□□□□ -1.83
SLC28A1O00337 MTCO3P1-205ENST00000422088 832 ntBASIC3.64□□□□□ -1.83
SLC28A1O00337 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.64□□□□□ -1.83
SLC28A1O00337 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.64□□□□□ -1.83
SLC28A1O00337 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SLC28A1O00337 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.64□□□□□ -1.83
SLC28A1O00337 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.64□□□□□ -1.83
SLC28A1O00337 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SLC28A1O00337 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.64□□□□□ -1.83
SLC28A1O00337 AC069528.1-202ENST00000482888 637 ntBASIC3.64□□□□□ -1.83
SLC28A1O00337 AC079203.1-201ENST00000487972 404 ntBASIC3.64□□□□□ -1.83
SLC28A1O00337 RPS4XP15-201ENST00000489210 795 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms