Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC78A2IDD5 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC78A2IDD5 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC78A2IDD5 RPS24P12-201ENST00000402084 394 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 AL136133.1-201ENST00000413694 376 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 HMGB1P11-201ENST00000413899 637 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC78A2IDD5 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC78A2IDD5 AC009237.2-201ENST00000421358 284 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC78A2IDD5 AL138785.1-201ENST00000425821 331 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC78A2IDD5 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC78A2IDD5 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC78A2IDD5 AL139415.2-201ENST00000431968 163 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 AC023347.2-201ENST00000433994 462 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 AL451139.1-201ENST00000434718 346 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC78A2IDD5 H2AFZP6-201ENST00000444403 394 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 EEF1E1P1-201ENST00000446998 430 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 PAXBP1P1-201ENST00000449315 447 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 SLC25A18P1-201ENST00000449385 454 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 RPL7P31-201ENST00000450192 724 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC78A2IDD5 AC003071.1-201ENST00000451219 789 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.81□□□□□ -1.64
CCDC78A2IDD5 AL033528.1-201ENST00000453780 140 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 RPL31P58-201ENST00000469001 379 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
CCDC78A2IDD5 IGLV2-34-201ENST00000490007 283 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC78A2IDD5 FCF1P3-201ENST00000496394 590 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 AC105252.1-201ENST00000503089 286 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC78A2IDD5 AC116353.2-201ENST00000505332 712 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
CCDC78A2IDD5 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC78A2IDD5 PRDX4P1-201ENST00000507189 574 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.81□□□□□ -1.64
CCDC78A2IDD5 AC091868.1-201ENST00000508746 304 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 AC108043.1-201ENST00000512696 574 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 RNA5SP464-201ENST00000516251 108 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 RN7SKP96-201ENST00000516948 297 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 Y_RNA.719-201ENST00000517156 106 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 AC025881.1-201ENST00000518851 512 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 AC021006.3-201ENST00000530771 192 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC78A2IDD5 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC78A2IDD5 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.81□□□□□ -1.64
CCDC78A2IDD5 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.81□□□□□ -1.64
CCDC78A2IDD5 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC78A2IDD5 EDDM3DP-201ENST00000554692 434 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC78A2IDD5 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC78A2IDD5 AC090312.1-201ENST00000580637 348 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC78A2IDD5 AC017100.2-201ENST00000584628 355 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 SEPT7P9-203ENST00000604116 343 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 AP001521.2-201ENST00000608772 546 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 AC006566.1-201ENST00000608943 513 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 AC007497.1-201ENST00000610421 561 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 FAM27B-201ENST00000610601 213 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 AC090517.2-201ENST00000614966 680 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC78A2IDD5 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.81□□□□□ -1.64
CCDC78A2IDD5 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC78A2IDD5 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC78A2IDD5 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC78A2IDD5 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC78A2IDD5 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC78A2IDD5 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC78A2IDD5 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC78A2IDD5 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
CCDC78A2IDD5 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC78A2IDD5 DCAF13P1-201ENST00000495256 1330 ntBASIC4.8□□□□□ -1.64
CCDC78A2IDD5 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC78A2IDD5 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC78A2IDD5 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CCDC78A2IDD5 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC78A2IDD5 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC78A2IDD5 RNU5F-6P-201ENST00000362979 116 ntBASIC4.8□□□□□ -1.64
CCDC78A2IDD5 RPS3AP23-201ENST00000401762 784 ntBASIC4.8□□□□□ -1.64
CCDC78A2IDD5 ARL4AP5-201ENST00000404372 599 ntBASIC4.8□□□□□ -1.64
CCDC78A2IDD5 AL450338.1-201ENST00000407987 512 ntBASIC4.8□□□□□ -1.64
CCDC78A2IDD5 U3.35-201ENST00000408405 208 ntBASIC4.8□□□□□ -1.64
CCDC78A2IDD5 HMGN1P14-201ENST00000412459 517 ntBASIC4.8□□□□□ -1.64
CCDC78A2IDD5 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC78A2IDD5 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.8□□□□□ -1.64
CCDC78A2IDD5 AL360081.1-201ENST00000428299 555 ntBASIC4.8□□□□□ -1.64
CCDC78A2IDD5 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC78A2IDD5 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC78A2IDD5 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC78A2IDD5 AC105402.2-201ENST00000438503 358 ntBASIC4.8□□□□□ -1.64
CCDC78A2IDD5 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC78A2IDD5 TDGF1P1-201ENST00000445734 527 ntBASIC4.8□□□□□ -1.64
CCDC78A2IDD5 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC78A2IDD5 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC78A2IDD5 HMGB3P21-201ENST00000452483 547 ntBASIC4.8□□□□□ -1.64
CCDC78A2IDD5 AL445433.1-201ENST00000457507 257 ntBASIC4.8□□□□□ -1.64
CCDC78A2IDD5 CYCSP34-201ENST00000458172 304 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms