Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SHISA3A0PJX4 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHISA3A0PJX4 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.04□□□□□ -1.6
SHISA3A0PJX4 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
SHISA3A0PJX4 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHISA3A0PJX4 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SHISA3A0PJX4 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.04□□□□□ -1.6
SHISA3A0PJX4 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 SNORA21-201ENST00000362423 132 ntBASIC5.03□□□□□ -1.6
SHISA3A0PJX4 Y_RNA.133-201ENST00000363428 110 ntBASIC5.03□□□□□ -1.6
SHISA3A0PJX4 RNU4-2-201ENST00000365668 141 ntBASIC5.03□□□□□ -1.6
SHISA3A0PJX4 AC005042.1-201ENST00000393397 800 ntBASIC5.03□□□□□ -1.6
SHISA3A0PJX4 RNU2-15P-201ENST00000410692 191 ntBASIC5.03□□□□□ -1.6
SHISA3A0PJX4 RNU4-14P-201ENST00000410858 122 ntBASIC5.03□□□□□ -1.6
SHISA3A0PJX4 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 RPL6P29-201ENST00000414863 865 ntBASIC5.03□□□□□ -1.6
SHISA3A0PJX4 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 FAM183DP-201ENST00000421987 399 ntBASIC5.03□□□□□ -1.6
SHISA3A0PJX4 HMGN2P27-201ENST00000427352 270 ntBASIC5.03□□□□□ -1.6
SHISA3A0PJX4 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 AC128677.1-201ENST00000436016 442 ntBASIC5.03□□□□□ -1.6
SHISA3A0PJX4 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 AC245291.3-201ENST00000443400 292 ntBASIC5.03□□□□□ -1.6
SHISA3A0PJX4 LINC02210-201ENST00000444561 288 ntBASIC5.03□□□□□ -1.6
SHISA3A0PJX4 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 FTLP8-201ENST00000446770 267 ntBASIC5.03□□□□□ -1.6
SHISA3A0PJX4 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 AL118520.1-201ENST00000450770 291 ntBASIC5.03□□□□□ -1.6
SHISA3A0PJX4 SNORD125-201ENST00000459538 96 ntBASIC5.03□□□□□ -1.6
SHISA3A0PJX4 AC015524.1-201ENST00000491585 472 ntBASIC5.03□□□□□ -1.6
SHISA3A0PJX4 AL049874.2-201ENST00000492636 288 ntBASIC5.03□□□□□ -1.6
SHISA3A0PJX4 TRBVA-201ENST00000498804 316 ntBASIC5.03□□□□□ -1.6
SHISA3A0PJX4 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.03□□□□□ -1.6
SHISA3A0PJX4 RNU6-1046P-201ENST00000516538 107 ntBASIC5.03□□□□□ -1.6
SHISA3A0PJX4 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 AP000857.1-201ENST00000532151 543 ntBASIC5.03□□□□□ -1.6
SHISA3A0PJX4 AC018630.1-201ENST00000541376 925 ntBASIC5.03□□□□□ -1.6
SHISA3A0PJX4 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 BNIP3P25-201ENST00000596023 559 ntBASIC5.03□□□□□ -1.6
SHISA3A0PJX4 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 AC123786.2-201ENST00000603459 275 ntBASIC5.03□□□□□ -1.6
SHISA3A0PJX4 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 AL022394.1-201ENST00000606979 292 ntBASIC5.03□□□□□ -1.6
SHISA3A0PJX4 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 MIR6889-201ENST00000613185 59 ntBASIC5.03□□□□□ -1.6
SHISA3A0PJX4 RFPL4AP6-201ENST00000616792 846 ntBASIC5.03□□□□□ -1.6
SHISA3A0PJX4 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 AC015908.5-201ENST00000623289 343 ntBASIC5.03□□□□□ -1.6
SHISA3A0PJX4 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 AC135068.12-201ENST00000637370 931 ntBASIC5.03□□□□□ -1.6
SHISA3A0PJX4 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 CD36-221ENST00000534394 1741 ntTSL 2 BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.03□□□□□ -1.6
SHISA3A0PJX4 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 RNU6-179P-201ENST00000363350 107 ntBASIC5.02□□□□□ -1.61
SHISA3A0PJX4 SNORD113-7-201ENST00000363762 77 ntBASIC5.02□□□□□ -1.61
SHISA3A0PJX4 RNU6-82P-201ENST00000363970 107 ntBASIC5.02□□□□□ -1.61
SHISA3A0PJX4 AC117470.1-201ENST00000381974 330 ntBASIC5.02□□□□□ -1.61
SHISA3A0PJX4 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 AL049697.2-201ENST00000403708 294 ntBASIC5.02□□□□□ -1.61
SHISA3A0PJX4 MIR548F5-201ENST00000408421 86 ntBASIC5.02□□□□□ -1.61
SHISA3A0PJX4 RPL37P10-201ENST00000412884 288 ntBASIC5.02□□□□□ -1.61
SHISA3A0PJX4 RPL35AP3-201ENST00000414680 288 ntBASIC5.02□□□□□ -1.61
SHISA3A0PJX4 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms