Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 RPL23AP26-201ENST00000412728 464 ntBASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 RPL31P2-201ENST00000413849 377 ntBASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 HIGD1AP4-201ENST00000430194 280 ntBASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL050321.1-201ENST00000432363 400 ntBASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 RANP8-201ENST00000444720 713 ntBASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 RPS11P1-201ENST00000451072 473 ntBASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 BX276092.4-201ENST00000452056 248 ntBASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 NDUFA12P1-201ENST00000455914 406 ntBASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 MTCO3P2-201ENST00000457365 171 ntBASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 MTND2P14-201ENST00000482139 351 ntBASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC104090.1-201ENST00000506341 1171 ntBASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 MTCYBP37-201ENST00000510642 1133 ntBASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 PTP4A1P6-201ENST00000531034 478 ntBASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 HIGD1AP17-201ENST00000554576 276 ntBASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC141257.3-201ENST00000572906 215 ntBASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC010680.3-201ENST00000604215 520 ntBASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AP003117.2-201ENST00000606010 545 ntBASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC019193.2-201ENST00000610012 634 ntBASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 MIR6868-201ENST00000611215 58 ntBASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC009464.1-201ENST00000615731 469 ntBASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC004825.2-201ENST00000616634 455 ntBASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC120349.2-201ENST00000625002 298 ntBASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL031985.3-201ENST00000565390 2449 ntBASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC015813.6-201ENST00000624409 5808 ntBASIC3.61□□□□□ -1.83
TRBV4-1A0A0J9YWV2 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 Y_RNA.25-201ENST00000362528 102 ntBASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 RNU6-157P-201ENST00000383957 107 ntBASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 MIR3074-201ENST00000384885 81 ntBASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 MIR192-201ENST00000384915 110 ntBASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 MIR323B-201ENST00000385269 82 ntBASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 TAS2R15P-201ENST00000390674 928 ntBASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 RNA5SP239-201ENST00000410218 129 ntBASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 TPT1P2-201ENST00000413105 503 ntBASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 MTND4P22-201ENST00000413116 1169 ntBASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL772161.1-201ENST00000439130 476 ntBASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 MTCO1P48-201ENST00000448024 1096 ntBASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 RN7SL860P-201ENST00000473738 223 ntBASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC013828.1-201ENST00000481845 158 ntBASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 RPS27AP13-201ENST00000498403 237 ntBASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC109445.1-201ENST00000512356 383 ntBASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 RN7SKP234-201ENST00000517173 224 ntBASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 OR4A12P-201ENST00000530847 918 ntBASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC090502.2-201ENST00000549267 280 ntBASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC125611.1-201ENST00000549563 229 ntBASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC090877.1-201ENST00000561418 344 ntBASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 VN1R78P-201ENST00000597393 564 ntBASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AC008536.1-201ENST00000602872 669 ntBASIC3.6□□□□□ -1.83
TRBV4-1A0A0J9YWV2 AL356218.2-201ENST00000605264 187 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms