Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RNU6-562P-201ENST00000362731 107 ntBASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 Y_RNA.527-201ENST00000384573 102 ntBASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 RNU6-328P-201ENST00000390887 106 ntBASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 RNU6-550P-201ENST00000391057 101 ntBASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 RPL31P2-201ENST00000413849 377 ntBASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 AC093155.2-201ENST00000420734 937 ntBASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 RPEP4-201ENST00000437636 602 ntBASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 RPL23AP60-201ENST00000450011 454 ntBASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 RPL12P25-201ENST00000455592 494 ntBASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 AC128713.1-201ENST00000471495 306 ntBASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 RN7SL369P-201ENST00000477138 299 ntBASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 RN7SL326P-201ENST00000477493 296 ntBASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 RPL21P93-201ENST00000480465 489 ntBASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 AOX3P-204ENST00000491025 2107 ntBASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 RNU6-1213P-201ENST00000517075 94 ntBASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 CYCSP25-201ENST00000525280 316 ntBASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 HMGN2P47-201ENST00000559378 272 ntBASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 MIR3189-201ENST00000578735 73 ntBASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 BNIP3P16-201ENST00000589779 534 ntBASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 AC007566.2-201ENST00000603642 413 ntBASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 AL451044.1-201ENST00000604867 238 ntBASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 AL022394.1-201ENST00000606979 292 ntBASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 U2.17-201ENST00000611454 95 ntBASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 AL355365.1-201ENST00000616480 294 ntBASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 PNPT1P2-201ENST00000456768 2050 ntBASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PCDHGA11Q9Y5H2 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 AP001284.1-201ENST00000528393 2118 ntBASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 SAGE4P-201ENST00000442271 3381 ntBASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 RNU2-21P-201ENST00000410368 188 ntBASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 RN7SKP159-201ENST00000410657 292 ntBASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 HMGB3P2-201ENST00000411913 584 ntBASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 Z93019.1-201ENST00000416450 973 ntBASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 AC009302.1-201ENST00000417147 390 ntBASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 RANP2-201ENST00000456833 229 ntBASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 AC135721.1-201ENST00000497954 479 ntBASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 KHDC1P1-201ENST00000511053 508 ntBASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 RPA2P3-201ENST00000533268 770 ntBASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 RN7SL475P-201ENST00000583379 298 ntBASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 MIR212-201ENST00000586026 110 ntBASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 AC006157.1-201ENST00000611750 366 ntBASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 AC116447.1-201ENST00000613153 453 ntBASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 MIR6128-201ENST00000615528 109 ntBASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
PCDHGA11Q9Y5H2 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms