Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 U8.3-201ENST00000363321 132 ntBASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 RNU6-289P-201ENST00000364093 107 ntBASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 MIR1305-201ENST00000408300 86 ntBASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 MTCO1P20-201ENST00000425366 358 ntBASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 AC023347.2-201ENST00000433994 462 ntBASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 AC002553.2-201ENST00000453217 340 ntBASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 BX322784.1-201ENST00000455793 1077 ntBASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 MTND1P11-201ENST00000456661 876 ntBASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 MTCO1P42-201ENST00000457379 726 ntBASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 RNU7-136P-201ENST00000458819 69 ntBASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 snoU13.20-201ENST00000459180 104 ntBASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 AC022447.3-201ENST00000506865 495 ntBASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 OR5BC1P-201ENST00000529327 739 ntBASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 AP003122.4-201ENST00000530980 758 ntBASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 HMGN2P6-201ENST00000551091 273 ntBASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 SULT1C2P1-202ENST00000562418 459 ntBASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 MIR3682-201ENST00000581338 84 ntBASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 AC008752.3-201ENST00000588113 712 ntBASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 AC060780.3-201ENST00000589464 80 ntBASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 AL121757.2-201ENST00000611223 313 ntBASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 AC037198.3-201ENST00000616754 526 ntBASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 AP002799.1-201ENST00000623552 423 ntBASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 AC131971.1-201ENST00000332881 1482 ntBASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
PCDHB4Q9Y5E5 MTND4P23-201ENST00000447723 1363 ntBASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 RNA5SP305-201ENST00000362665 119 ntBASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 RNU6-444P-201ENST00000383988 108 ntBASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 Y_RNA.409-201ENST00000383990 98 ntBASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 RNU6-1009P-201ENST00000390996 107 ntBASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 RPL23AP27-201ENST00000415161 451 ntBASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 SPA17P1-201ENST00000416656 452 ntBASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 RPS3AP9-201ENST00000417027 792 ntBASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 USP9YP27-201ENST00000418455 438 ntBASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 COX6CP17-201ENST00000421389 185 ntBASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 AL445669.1-201ENST00000426743 755 ntBASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 RN7SL515P-201ENST00000463999 297 ntBASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 RPS15AP17-201ENST00000470598 390 ntBASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 AC023598.1-201ENST00000472521 361 ntBASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 OR5M14P-201ENST00000506803 618 ntBASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 RNU6-488P-201ENST00000515918 99 ntBASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 RPL23AP53-201ENST00000521854 457 ntBASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 AC005868.1-201ENST00000536421 331 ntBASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.29□□□□□ -1.56
PCDHB4Q9Y5E5 AL358913.1-201ENST00000554342 121 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms