Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
LHX6Q9UPM6 FKBP1BP1-201ENST00000553366 325 ntBASIC6.72□□□□□ -1.33
LHX6Q9UPM6 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
LHX6Q9UPM6 MIR4659A-201ENST00000580269 81 ntBASIC6.72□□□□□ -1.33
LHX6Q9UPM6 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.72□□□□□ -1.33
LHX6Q9UPM6 Y_RNA.778-201ENST00000620203 90 ntBASIC6.72□□□□□ -1.33
LHX6Q9UPM6 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC6.72□□□□□ -1.33
LHX6Q9UPM6 AC008785.1-201ENST00000624475 456 ntBASIC6.72□□□□□ -1.33
LHX6Q9UPM6 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
LHX6Q9UPM6 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
LHX6Q9UPM6 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LHX6Q9UPM6 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LHX6Q9UPM6 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LHX6Q9UPM6 AC011933.2-201ENST00000578539 2790 ntBASIC6.72□□□□□ -1.33
LHX6Q9UPM6 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.72□□□□□ -1.33
LHX6Q9UPM6 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
LHX6Q9UPM6 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LHX6Q9UPM6 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
LHX6Q9UPM6 MSL3P1-202ENST00000440028 1468 ntBASIC6.72□□□□□ -1.33
LHX6Q9UPM6 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
LHX6Q9UPM6 AC241584.2-201ENST00000637142 2090 ntBASIC6.72□□□□□ -1.33
LHX6Q9UPM6 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC6.72□□□□□ -1.33
LHX6Q9UPM6 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
LHX6Q9UPM6 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
LHX6Q9UPM6 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
LHX6Q9UPM6 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC6.71□□□□□ -1.33
LHX6Q9UPM6 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC6.71□□□□□ -1.33
LHX6Q9UPM6 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
LHX6Q9UPM6 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.71□□□□□ -1.33
LHX6Q9UPM6 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.71□□□□□ -1.33
LHX6Q9UPM6 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC6.71□□□□□ -1.33
LHX6Q9UPM6 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
LHX6Q9UPM6 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
LHX6Q9UPM6 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.71□□□□□ -1.34
LHX6Q9UPM6 RMST-210ENST00000640149 2844 ntTSL 5 BASIC6.71□□□□□ -1.34
LHX6Q9UPM6 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
LHX6Q9UPM6 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
LHX6Q9UPM6 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
LHX6Q9UPM6 RN7SKP174-201ENST00000363803 330 ntBASIC6.71□□□□□ -1.34
LHX6Q9UPM6 RN7SKP81-201ENST00000365603 331 ntBASIC6.71□□□□□ -1.34
LHX6Q9UPM6 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC6.71□□□□□ -1.34
LHX6Q9UPM6 MIR937-201ENST00000401271 86 ntBASIC6.71□□□□□ -1.34
LHX6Q9UPM6 GCNT1P4-201ENST00000404096 329 ntBASIC6.71□□□□□ -1.34
LHX6Q9UPM6 RPS23P10-201ENST00000416185 486 ntBASIC6.71□□□□□ -1.34
LHX6Q9UPM6 AC069213.2-201ENST00000420238 366 ntBASIC6.71□□□□□ -1.34
LHX6Q9UPM6 AL022100.1-202ENST00000421214 548 ntBASIC6.71□□□□□ -1.34
LHX6Q9UPM6 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.71□□□□□ -1.34
LHX6Q9UPM6 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.71□□□□□ -1.34
LHX6Q9UPM6 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC6.71□□□□□ -1.34
LHX6Q9UPM6 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.71□□□□□ -1.34
LHX6Q9UPM6 CASP1P1-201ENST00000526345 212 ntBASIC6.71□□□□□ -1.34
LHX6Q9UPM6 RGS5-220ENST00000528689 566 ntTSL 5 BASIC6.71□□□□□ -1.34
LHX6Q9UPM6 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.71□□□□□ -1.34
LHX6Q9UPM6 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC6.71□□□□□ -1.34
LHX6Q9UPM6 AC009127.3-201ENST00000570531 403 ntBASIC6.71□□□□□ -1.34
LHX6Q9UPM6 AC040162.2-201ENST00000573092 157 ntBASIC6.71□□□□□ -1.34
LHX6Q9UPM6 MIR3613-201ENST00000579844 87 ntBASIC6.71□□□□□ -1.34
LHX6Q9UPM6 MIR4437-201ENST00000581331 60 ntBASIC6.71□□□□□ -1.34
LHX6Q9UPM6 MIR4470-201ENST00000583453 72 ntBASIC6.71□□□□□ -1.34
LHX6Q9UPM6 PRPF19P1-201ENST00000584766 898 ntBASIC6.71□□□□□ -1.34
LHX6Q9UPM6 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC6.71□□□□□ -1.34
LHX6Q9UPM6 RPSAP66-201ENST00000592196 606 ntBASIC6.71□□□□□ -1.34
LHX6Q9UPM6 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
LHX6Q9UPM6 SNORD39.4-201ENST00000620099 78 ntBASIC6.71□□□□□ -1.34
LHX6Q9UPM6 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC6.71□□□□□ -1.34
LHX6Q9UPM6 MAPK10-365ENST00000641902 3825 ntBASIC6.71□□□□□ -1.34
LHX6Q9UPM6 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC6.71□□□□□ -1.34
LHX6Q9UPM6 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
LHX6Q9UPM6 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LHX6Q9UPM6 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC6.71□□□□□ -1.34
LHX6Q9UPM6 BX322650.1-201ENST00000332359 2143 ntBASIC6.71□□□□□ -1.34
LHX6Q9UPM6 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
LHX6Q9UPM6 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
LHX6Q9UPM6 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC6.71□□□□□ -1.34
LHX6Q9UPM6 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LHX6Q9UPM6 NBPF8-201ENST00000583271 5330 ntBASIC6.71□□□□□ -1.34
LHX6Q9UPM6 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC6.71□□□□□ -1.34
LHX6Q9UPM6 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC6.71□□□□□ -1.34
LHX6Q9UPM6 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
LHX6Q9UPM6 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LHX6Q9UPM6 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LHX6Q9UPM6 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LHX6Q9UPM6 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.7□□□□□ -1.34
LHX6Q9UPM6 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms