Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
DUX4Q9UBX2 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
DUX4Q9UBX2 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
DUX4Q9UBX2 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.19□□□□□ -1.9
DUX4Q9UBX2 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.19□□□□□ -1.9
DUX4Q9UBX2 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
DUX4Q9UBX2 RNA5SP293-201ENST00000410527 113 ntBASIC3.19□□□□□ -1.9
DUX4Q9UBX2 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.19□□□□□ -1.9
DUX4Q9UBX2 B3GNT2P1-201ENST00000434960 952 ntBASIC3.19□□□□□ -1.9
DUX4Q9UBX2 SNORA71B-202ENST00000439232 272 ntBASIC3.19□□□□□ -1.9
DUX4Q9UBX2 MTCO3P43-201ENST00000440974 771 ntBASIC3.19□□□□□ -1.9
DUX4Q9UBX2 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.19□□□□□ -1.9
DUX4Q9UBX2 MTND1P33-201ENST00000446251 917 ntBASIC3.19□□□□□ -1.9
DUX4Q9UBX2 NPM1P49-201ENST00000448027 714 ntBASIC3.19□□□□□ -1.9
DUX4Q9UBX2 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.19□□□□□ -1.9
DUX4Q9UBX2 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.19□□□□□ -1.9
DUX4Q9UBX2 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.19□□□□□ -1.9
DUX4Q9UBX2 AC092451.1-201ENST00000480211 153 ntBASIC3.19□□□□□ -1.9
DUX4Q9UBX2 OR52A4P-202ENST00000481634 799 ntBASIC3.19□□□□□ -1.9
DUX4Q9UBX2 RPL31P13-201ENST00000484151 370 ntBASIC3.19□□□□□ -1.9
DUX4Q9UBX2 AP002812.1-201ENST00000495378 474 ntBASIC3.19□□□□□ -1.9
DUX4Q9UBX2 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
DUX4Q9UBX2 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.19□□□□□ -1.9
DUX4Q9UBX2 RNA5SP380-201ENST00000517190 98 ntBASIC3.19□□□□□ -1.9
DUX4Q9UBX2 NDUFB9P3-201ENST00000521269 501 ntBASIC3.19□□□□□ -1.9
DUX4Q9UBX2 AC007991.1-201ENST00000522680 631 ntBASIC3.19□□□□□ -1.9
DUX4Q9UBX2 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
DUX4Q9UBX2 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.19□□□□□ -1.9
DUX4Q9UBX2 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
DUX4Q9UBX2 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.19□□□□□ -1.9
DUX4Q9UBX2 AC090877.1-201ENST00000561418 344 ntBASIC3.19□□□□□ -1.9
DUX4Q9UBX2 LINC00557-201ENST00000563184 1279 ntBASIC3.19□□□□□ -1.9
DUX4Q9UBX2 MIR5685-201ENST00000579080 79 ntBASIC3.19□□□□□ -1.9
DUX4Q9UBX2 MIR3158-1-201ENST00000583596 81 ntBASIC3.19□□□□□ -1.9
DUX4Q9UBX2 AC017100.2-201ENST00000584628 355 ntBASIC3.19□□□□□ -1.9
DUX4Q9UBX2 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.19□□□□□ -1.9
DUX4Q9UBX2 VN1R88P-201ENST00000596787 292 ntBASIC3.19□□□□□ -1.9
DUX4Q9UBX2 AL390816.3-201ENST00000604527 1066 ntBASIC3.19□□□□□ -1.9
DUX4Q9UBX2 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
DUX4Q9UBX2 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
DUX4Q9UBX2 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.19□□□□□ -1.9
DUX4Q9UBX2 AL118508.4-201ENST00000624142 1176 ntBASIC3.19□□□□□ -1.9
DUX4Q9UBX2 GABPAP-201ENST00000419271 1356 ntBASIC3.19□□□□□ -1.9
DUX4Q9UBX2 ELL2P4-201ENST00000446870 1376 ntBASIC3.19□□□□□ -1.9
DUX4Q9UBX2 MTCO1P6-201ENST00000481192 1384 ntBASIC3.19□□□□□ -1.9
DUX4Q9UBX2 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.19□□□□□ -1.9
DUX4Q9UBX2 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
DUX4Q9UBX2 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
DUX4Q9UBX2 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
DUX4Q9UBX2 MFSD8-213ENST00000641134 1327 ntBASIC3.19□□□□□ -1.9
DUX4Q9UBX2 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.18□□□□□ -1.9
DUX4Q9UBX2 USP8P1-201ENST00000494673 3183 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.18□□□□□ -1.9
DUX4Q9UBX2 AC000367.1-201ENST00000452711 1766 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
DUX4Q9UBX2 AL589826.1-201ENST00000340697 249 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 SNORA7.2-201ENST00000364446 145 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 RNU6-283P-201ENST00000364788 107 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.18□□□□□ -1.9
DUX4Q9UBX2 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
DUX4Q9UBX2 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
DUX4Q9UBX2 RNU6-1151P-201ENST00000384684 107 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 MIR199A2-201ENST00000385289 110 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.18□□□□□ -1.9
DUX4Q9UBX2 DSTNP4-201ENST00000399472 474 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 EIF5P1-201ENST00000400019 1231 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 HSPE1P26-201ENST00000405341 275 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 CYCSP19-201ENST00000411715 316 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.18□□□□□ -1.9
DUX4Q9UBX2 AC244098.2-201ENST00000422068 99 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 AL139247.1-201ENST00000422768 325 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 AC005517.2-201ENST00000424673 553 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 OSTCP5-201ENST00000425293 453 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.18□□□□□ -1.9
DUX4Q9UBX2 AL445584.1-201ENST00000431451 330 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 UBE2V1P5-201ENST00000440070 405 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 VN1R34P-201ENST00000447387 883 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 AL500527.1-201ENST00000448532 255 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 RPL23AP15-201ENST00000450202 459 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 BX248409.1-201ENST00000455497 255 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.18□□□□□ -1.9
DUX4Q9UBX2 TMED11P-201ENST00000479478 690 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 AL139099.1-201ENST00000497398 403 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 UBE2CP3-201ENST00000502715 450 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.18□□□□□ -1.9
DUX4Q9UBX2 SNORA67.7-201ENST00000516664 135 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 AF279873.1-201ENST00000523393 313 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 OR5AP1P-201ENST00000529730 940 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.18□□□□□ -1.9
DUX4Q9UBX2 AL845331.3-202ENST00000562856 261 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 ZNF192P1-203ENST00000565888 810 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.18□□□□□ -1.9
DUX4Q9UBX2 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.18□□□□□ -1.9
DUX4Q9UBX2 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.18□□□□□ -1.9
DUX4Q9UBX2 AC107982.3-201ENST00000584957 985 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.18□□□□□ -1.9
DUX4Q9UBX2 AC008687.2-201ENST00000597865 520 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 AC007566.2-201ENST00000603642 413 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 AC112230.1-201ENST00000604342 547 ntBASIC3.18□□□□□ -1.9
DUX4Q9UBX2 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms