Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 SNORA57.1-201ENST00000391227 145 ntBASIC4.86□□□□□ -1.63
COL20A1Q9P218 SNORD66.1-201ENST00000391230 76 ntBASIC4.86□□□□□ -1.63
COL20A1Q9P218 AL023807.1-201ENST00000407932 359 ntBASIC4.86□□□□□ -1.63
COL20A1Q9P218 RN7SKP263-201ENST00000411194 309 ntBASIC4.86□□□□□ -1.63
COL20A1Q9P218 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.86□□□□□ -1.63
COL20A1Q9P218 Z99497.1-201ENST00000421282 135 ntBASIC4.86□□□□□ -1.63
COL20A1Q9P218 MED14P1-201ENST00000430517 648 ntBASIC4.86□□□□□ -1.63
COL20A1Q9P218 AL356276.2-201ENST00000435919 558 ntBASIC4.86□□□□□ -1.63
COL20A1Q9P218 AC129850.1-201ENST00000436203 508 ntBASIC4.86□□□□□ -1.63
COL20A1Q9P218 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.86□□□□□ -1.63
COL20A1Q9P218 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.86□□□□□ -1.63
COL20A1Q9P218 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.86□□□□□ -1.63
COL20A1Q9P218 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.86□□□□□ -1.63
COL20A1Q9P218 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.86□□□□□ -1.63
COL20A1Q9P218 AC112198.1-201ENST00000505369 1220 ntBASIC4.86□□□□□ -1.63
COL20A1Q9P218 MTATP6P22-201ENST00000507369 598 ntBASIC4.86□□□□□ -1.63
COL20A1Q9P218 AL592156.1-201ENST00000508758 304 ntBASIC4.86□□□□□ -1.63
COL20A1Q9P218 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.86□□□□□ -1.63
COL20A1Q9P218 AC099522.1-202ENST00000514718 367 ntBASIC4.86□□□□□ -1.63
COL20A1Q9P218 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.86□□□□□ -1.63
COL20A1Q9P218 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL20A1Q9P218 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.86□□□□□ -1.63
COL20A1Q9P218 OR7K1P-201ENST00000546439 926 ntBASIC4.86□□□□□ -1.63
COL20A1Q9P218 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.86□□□□□ -1.63
COL20A1Q9P218 ACTR3BP3-201ENST00000565577 979 ntBASIC4.86□□□□□ -1.63
COL20A1Q9P218 AC020914.6-201ENST00000594327 272 ntBASIC4.86□□□□□ -1.63
COL20A1Q9P218 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.86□□□□□ -1.63
COL20A1Q9P218 VN1R85P-201ENST00000601587 426 ntBASIC4.86□□□□□ -1.63
COL20A1Q9P218 AL596327.1-201ENST00000603629 213 ntBASIC4.86□□□□□ -1.63
COL20A1Q9P218 AC135507.1-201ENST00000607214 561 ntBASIC4.86□□□□□ -1.63
COL20A1Q9P218 Z69908.1-201ENST00000622603 247 ntBASIC4.86□□□□□ -1.63
COL20A1Q9P218 AC079228.1-201ENST00000624774 1049 ntBASIC4.86□□□□□ -1.63
COL20A1Q9P218 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL20A1Q9P218 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.86□□□□□ -1.63
COL20A1Q9P218 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.86□□□□□ -1.63
COL20A1Q9P218 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
COL20A1Q9P218 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL20A1Q9P218 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL20A1Q9P218 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL20A1Q9P218 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL20A1Q9P218 MTCO1P14-201ENST00000441695 1559 ntBASIC4.86□□□□□ -1.63
COL20A1Q9P218 CR381670.1-201ENST00000624291 1693 ntBASIC4.86□□□□□ -1.63
COL20A1Q9P218 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL20A1Q9P218 ERCC6-202ENST00000374127 1782 ntBASIC4.86□□□□□ -1.63
COL20A1Q9P218 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.86□□□□□ -1.63
COL20A1Q9P218 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.86□□□□□ -1.63
COL20A1Q9P218 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL20A1Q9P218 AC021242.1-201ENST00000507315 2035 ntBASIC4.85□□□□□ -1.63
COL20A1Q9P218 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
COL20A1Q9P218 SAGE2P-201ENST00000420011 2126 ntBASIC4.85□□□□□ -1.63
COL20A1Q9P218 AC083843.3-201ENST00000623679 2186 ntBASIC4.85□□□□□ -1.63
COL20A1Q9P218 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.85□□□□□ -1.63
COL20A1Q9P218 AL133243.3-201ENST00000617415 3004 ntBASIC4.85□□□□□ -1.63
COL20A1Q9P218 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL20A1Q9P218 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.85□□□□□ -1.63
COL20A1Q9P218 MAPK10-349ENST00000641767 3661 ntBASIC4.85□□□□□ -1.63
COL20A1Q9P218 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL20A1Q9P218 RNA5SP130-201ENST00000364431 114 ntBASIC4.85□□□□□ -1.63
COL20A1Q9P218 RNU6-657P-201ENST00000383904 107 ntBASIC4.85□□□□□ -1.63
COL20A1Q9P218 SNRPEP2-201ENST00000397592 279 ntBASIC4.85□□□□□ -1.63
COL20A1Q9P218 RPS3AP26-201ENST00000398259 784 ntBASIC4.85□□□□□ -1.63
COL20A1Q9P218 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL20A1Q9P218 NUP35P2-201ENST00000416748 943 ntBASIC4.85□□□□□ -1.63
COL20A1Q9P218 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL20A1Q9P218 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.85□□□□□ -1.63
COL20A1Q9P218 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.85□□□□□ -1.63
COL20A1Q9P218 VN1R10P-201ENST00000447106 875 ntBASIC4.85□□□□□ -1.63
COL20A1Q9P218 RPL23AP81-201ENST00000455252 467 ntBASIC4.85□□□□□ -1.63
COL20A1Q9P218 TRBV26-201ENST00000456572 344 ntBASIC4.85□□□□□ -1.63
COL20A1Q9P218 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.85□□□□□ -1.63
COL20A1Q9P218 snoU13.7-201ENST00000459220 104 ntBASIC4.85□□□□□ -1.63
COL20A1Q9P218 MTND4LP3-201ENST00000468320 276 ntBASIC4.85□□□□□ -1.63
COL20A1Q9P218 MTCYBP17-201ENST00000503579 789 ntBASIC4.85□□□□□ -1.63
COL20A1Q9P218 AC114981.1-201ENST00000503897 678 ntBASIC4.85□□□□□ -1.63
COL20A1Q9P218 AC110792.2-201ENST00000510278 224 ntBASIC4.85□□□□□ -1.63
COL20A1Q9P218 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.85□□□□□ -1.63
COL20A1Q9P218 KCTD9P2-201ENST00000512203 1013 ntBASIC4.85□□□□□ -1.63
COL20A1Q9P218 RN7SKP82-201ENST00000516786 223 ntBASIC4.85□□□□□ -1.63
COL20A1Q9P218 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.85□□□□□ -1.63
COL20A1Q9P218 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.85□□□□□ -1.63
COL20A1Q9P218 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.85□□□□□ -1.63
COL20A1Q9P218 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.85□□□□□ -1.63
COL20A1Q9P218 DEFB131D-201ENST00000526803 184 ntBASIC4.85□□□□□ -1.63
COL20A1Q9P218 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.85□□□□□ -1.63
COL20A1Q9P218 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.85□□□□□ -1.63
COL20A1Q9P218 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.85□□□□□ -1.63
COL20A1Q9P218 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.85□□□□□ -1.63
COL20A1Q9P218 AC008127.2-201ENST00000549925 1075 ntBASIC4.85□□□□□ -1.63
COL20A1Q9P218 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.85□□□□□ -1.63
COL20A1Q9P218 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.85□□□□□ -1.63
COL20A1Q9P218 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.85□□□□□ -1.63
COL20A1Q9P218 AGGF1P8-201ENST00000562979 1000 ntBASIC4.85□□□□□ -1.63
COL20A1Q9P218 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.85□□□□□ -1.63
COL20A1Q9P218 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.85□□□□□ -1.63
COL20A1Q9P218 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.85□□□□□ -1.63
COL20A1Q9P218 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.85□□□□□ -1.63
COL20A1Q9P218 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.85□□□□□ -1.63
COL20A1Q9P218 AC024941.1-201ENST00000612250 334 ntBASIC4.85□□□□□ -1.63
COL20A1Q9P218 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.85□□□□□ -1.63
COL20A1Q9P218 AC092140.2-201ENST00000618027 521 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms