Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC068724.1-201ENST00000487100 792 ntBASIC3.21□□□□□ -1.9
CISHQ9NSE2 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.21□□□□□ -1.9
CISHQ9NSE2 SNORA70.24-201ENST00000517233 118 ntBASIC3.21□□□□□ -1.9
CISHQ9NSE2 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.21□□□□□ -1.9
CISHQ9NSE2 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.21□□□□□ -1.9
CISHQ9NSE2 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.21□□□□□ -1.9
CISHQ9NSE2 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.21□□□□□ -1.9
CISHQ9NSE2 BNIP3P11-201ENST00000603878 563 ntBASIC3.21□□□□□ -1.9
CISHQ9NSE2 AC103710.3-201ENST00000608157 948 ntBASIC3.21□□□□□ -1.9
CISHQ9NSE2 AC012531.5-201ENST00000611375 151 ntBASIC3.21□□□□□ -1.9
CISHQ9NSE2 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.21□□□□□ -1.9
CISHQ9NSE2 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CISHQ9NSE2 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CISHQ9NSE2 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CISHQ9NSE2 SYT14P1-202ENST00000600441 1448 ntBASIC3.2□□□□□ -1.9
CISHQ9NSE2 RPL23AP57-201ENST00000332361 466 ntBASIC3.2□□□□□ -1.9
CISHQ9NSE2 SNORA70E-201ENST00000384492 135 ntBASIC3.2□□□□□ -1.9
CISHQ9NSE2 RPL21P3-201ENST00000395517 478 ntBASIC3.2□□□□□ -1.9
CISHQ9NSE2 PTP4A1P5-201ENST00000420305 455 ntBASIC3.2□□□□□ -1.9
CISHQ9NSE2 RPS3AP12-201ENST00000443616 753 ntBASIC3.2□□□□□ -1.9
CISHQ9NSE2 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.2□□□□□ -1.9
CISHQ9NSE2 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.2□□□□□ -1.9
CISHQ9NSE2 AC146507.2-201ENST00000460608 476 ntBASIC3.2□□□□□ -1.9
CISHQ9NSE2 OR2A20P-203ENST00000498397 1268 ntBASIC3.2□□□□□ -1.9
CISHQ9NSE2 PRELID3BP6-201ENST00000503839 571 ntBASIC3.2□□□□□ -1.9
CISHQ9NSE2 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.2□□□□□ -1.9
CISHQ9NSE2 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.2□□□□□ -1.9
CISHQ9NSE2 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.2□□□□□ -1.9
CISHQ9NSE2 AC006270.2-201ENST00000578523 652 ntBASIC3.2□□□□□ -1.9
CISHQ9NSE2 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.2□□□□□ -1.9
CISHQ9NSE2 AC022146.1-201ENST00000595307 847 ntBASIC3.2□□□□□ -1.9
CISHQ9NSE2 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.2□□□□□ -1.9
CISHQ9NSE2 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CISHQ9NSE2 SEPT7P7-201ENST00000420492 1301 ntBASIC3.19□□□□□ -1.9
CISHQ9NSE2 DCAF13P1-201ENST00000495256 1330 ntBASIC3.19□□□□□ -1.9
CISHQ9NSE2 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.19□□□□□ -1.9
CISHQ9NSE2 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CISHQ9NSE2 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CISHQ9NSE2 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CISHQ9NSE2 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CISHQ9NSE2 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CISHQ9NSE2 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CISHQ9NSE2 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CISHQ9NSE2 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CISHQ9NSE2 AL583834.1-201ENST00000406943 343 ntBASIC3.19□□□□□ -1.9
CISHQ9NSE2 RPL7P8-201ENST00000411964 730 ntBASIC3.19□□□□□ -1.9
CISHQ9NSE2 AL024507.1-201ENST00000412741 274 ntBASIC3.19□□□□□ -1.9
CISHQ9NSE2 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.19□□□□□ -1.9
CISHQ9NSE2 AL159169.1-201ENST00000421119 127 ntBASIC3.19□□□□□ -1.9
CISHQ9NSE2 MTCO1P52-201ENST00000433928 531 ntBASIC3.19□□□□□ -1.9
CISHQ9NSE2 AL138799.3-201ENST00000438968 350 ntBASIC3.19□□□□□ -1.9
CISHQ9NSE2 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.19□□□□□ -1.9
CISHQ9NSE2 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.19□□□□□ -1.9
CISHQ9NSE2 HMGB1P5-202ENST00000451497 985 ntBASIC3.19□□□□□ -1.9
CISHQ9NSE2 RN7SL75P-201ENST00000461926 281 ntBASIC3.19□□□□□ -1.9
CISHQ9NSE2 RPL27AP5-201ENST00000469428 449 ntBASIC3.19□□□□□ -1.9
CISHQ9NSE2 RN7SL633P-201ENST00000488974 297 ntBASIC3.19□□□□□ -1.9
CISHQ9NSE2 AC026427.2-201ENST00000506228 536 ntBASIC3.19□□□□□ -1.9
CISHQ9NSE2 RNA5SP341-201ENST00000516261 117 ntBASIC3.19□□□□□ -1.9
CISHQ9NSE2 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CISHQ9NSE2 AP002404.1-201ENST00000532005 451 ntBASIC3.19□□□□□ -1.9
CISHQ9NSE2 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.19□□□□□ -1.9
CISHQ9NSE2 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.19□□□□□ -1.9
CISHQ9NSE2 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CISHQ9NSE2 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CISHQ9NSE2 AL121603.1-201ENST00000553815 142 ntBASIC3.19□□□□□ -1.9
CISHQ9NSE2 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.19□□□□□ -1.9
CISHQ9NSE2 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.19□□□□□ -1.9
CISHQ9NSE2 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.19□□□□□ -1.9
CISHQ9NSE2 BNIP3P22-201ENST00000593399 556 ntBASIC3.19□□□□□ -1.9
CISHQ9NSE2 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.19□□□□□ -1.9
CISHQ9NSE2 AC007687.1-201ENST00000602704 304 ntBASIC3.19□□□□□ -1.9
CISHQ9NSE2 AC084373.1-201ENST00000603311 235 ntBASIC3.19□□□□□ -1.9
CISHQ9NSE2 AL161756.2-201ENST00000604597 246 ntBASIC3.19□□□□□ -1.9
CISHQ9NSE2 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.19□□□□□ -1.9
CISHQ9NSE2 AC138649.5-201ENST00000637456 137 ntBASIC3.19□□□□□ -1.9
CISHQ9NSE2 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.19□□□□□ -1.9
CISHQ9NSE2 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CISHQ9NSE2 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CISHQ9NSE2 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.19□□□□□ -1.9
CISHQ9NSE2 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CISHQ9NSE2 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CISHQ9NSE2 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CISHQ9NSE2 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
CISHQ9NSE2 AL035425.3-201ENST00000564206 4996 ntBASIC3.18□□□□□ -1.9
CISHQ9NSE2 GABPAP-201ENST00000419271 1356 ntBASIC3.18□□□□□ -1.9
CISHQ9NSE2 SNORD6-201ENST00000365444 73 ntBASIC3.18□□□□□ -1.9
CISHQ9NSE2 AL138885.1-201ENST00000405921 675 ntBASIC3.18□□□□□ -1.9
CISHQ9NSE2 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.18□□□□□ -1.9
CISHQ9NSE2 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.18□□□□□ -1.9
CISHQ9NSE2 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.18□□□□□ -1.9
CISHQ9NSE2 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.18□□□□□ -1.9
CISHQ9NSE2 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.18□□□□□ -1.9
CISHQ9NSE2 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.18□□□□□ -1.9
CISHQ9NSE2 RPL5P24-201ENST00000463742 885 ntBASIC3.18□□□□□ -1.9
CISHQ9NSE2 TRAV31-201ENST00000502780 342 ntBASIC3.18□□□□□ -1.9
CISHQ9NSE2 RN7SKP43-201ENST00000516173 320 ntBASIC3.18□□□□□ -1.9
CISHQ9NSE2 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.18□□□□□ -1.9
CISHQ9NSE2 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.18□□□□□ -1.9
CISHQ9NSE2 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms