Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 MIR2116-201ENST00000517221 80 ntBASIC3.96□□□□□ -1.78
SIX2Q9NPC8 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.96□□□□□ -1.78
SIX2Q9NPC8 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.96□□□□□ -1.78
SIX2Q9NPC8 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.96□□□□□ -1.78
SIX2Q9NPC8 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.96□□□□□ -1.78
SIX2Q9NPC8 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.96□□□□□ -1.78
SIX2Q9NPC8 AC022662.1-201ENST00000580252 331 ntBASIC3.96□□□□□ -1.78
SIX2Q9NPC8 MIR5187-201ENST00000583479 76 ntBASIC3.96□□□□□ -1.78
SIX2Q9NPC8 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
SIX2Q9NPC8 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.96□□□□□ -1.78
SIX2Q9NPC8 AC244505.7-201ENST00000599675 272 ntBASIC3.96□□□□□ -1.78
SIX2Q9NPC8 NTAN1P1-201ENST00000603150 646 ntBASIC3.96□□□□□ -1.78
SIX2Q9NPC8 AL163642.2-201ENST00000604722 1019 ntBASIC3.96□□□□□ -1.78
SIX2Q9NPC8 AC097478.2-201ENST00000610572 514 ntBASIC3.96□□□□□ -1.78
SIX2Q9NPC8 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.96□□□□□ -1.78
SIX2Q9NPC8 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.96□□□□□ -1.78
SIX2Q9NPC8 AC018926.3-201ENST00000618841 406 ntBASIC3.96□□□□□ -1.78
SIX2Q9NPC8 AC006840.1-201ENST00000623069 542 ntBASIC3.96□□□□□ -1.78
SIX2Q9NPC8 AL356121.2-201ENST00000624715 780 ntBASIC3.96□□□□□ -1.78
SIX2Q9NPC8 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.96□□□□□ -1.78
SIX2Q9NPC8 AP000553.6-201ENST00000641242 118 ntBASIC3.96□□□□□ -1.78
SIX2Q9NPC8 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.96□□□□□ -1.78
SIX2Q9NPC8 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.96□□□□□ -1.78
SIX2Q9NPC8 TTC39DP-201ENST00000416781 1688 ntBASIC3.96□□□□□ -1.78
SIX2Q9NPC8 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SIX2Q9NPC8 AP005901.5-201ENST00000545779 1796 ntBASIC3.96□□□□□ -1.78
SIX2Q9NPC8 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SIX2Q9NPC8 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SIX2Q9NPC8 SGO1P1-201ENST00000603525 1447 ntBASIC3.95□□□□□ -1.78
SIX2Q9NPC8 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.95□□□□□ -1.78
SIX2Q9NPC8 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.95□□□□□ -1.78
SIX2Q9NPC8 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SIX2Q9NPC8 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SIX2Q9NPC8 AC092079.1-201ENST00000558620 1985 ntBASIC3.95□□□□□ -1.78
SIX2Q9NPC8 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SIX2Q9NPC8 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
SIX2Q9NPC8 AC025263.3-201ENST00000622965 1396 ntBASIC3.95□□□□□ -1.78
SIX2Q9NPC8 SNORD113-6-201ENST00000363345 75 ntBASIC3.95□□□□□ -1.78
SIX2Q9NPC8 OR52E6-202ENST00000379946 954 ntBASIC3.95□□□□□ -1.78
SIX2Q9NPC8 MTHFD2P2-201ENST00000407725 247 ntBASIC3.95□□□□□ -1.78
SIX2Q9NPC8 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.95□□□□□ -1.78
SIX2Q9NPC8 MTCO1P3-201ENST00000429327 192 ntBASIC3.95□□□□□ -1.78
SIX2Q9NPC8 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.95□□□□□ -1.78
SIX2Q9NPC8 SETP8-201ENST00000435341 628 ntBASIC3.95□□□□□ -1.78
SIX2Q9NPC8 FGF7P5-201ENST00000441829 291 ntBASIC3.95□□□□□ -1.78
SIX2Q9NPC8 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.95□□□□□ -1.78
SIX2Q9NPC8 RPS29P31-201ENST00000446147 164 ntBASIC3.95□□□□□ -1.78
SIX2Q9NPC8 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.95□□□□□ -1.78
SIX2Q9NPC8 EXTL2P1-201ENST00000446218 416 ntBASIC3.95□□□□□ -1.78
SIX2Q9NPC8 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC3.95□□□□□ -1.78
SIX2Q9NPC8 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.95□□□□□ -1.78
SIX2Q9NPC8 AC079776.3-201ENST00000450665 370 ntBASIC3.95□□□□□ -1.78
SIX2Q9NPC8 AC099563.1-201ENST00000456086 418 ntBASIC3.95□□□□□ -1.78
SIX2Q9NPC8 AC103987.1-201ENST00000473394 348 ntBASIC3.95□□□□□ -1.78
SIX2Q9NPC8 RPS3AP50-201ENST00000487064 803 ntBASIC3.95□□□□□ -1.78
SIX2Q9NPC8 AL139099.1-201ENST00000497398 403 ntBASIC3.95□□□□□ -1.78
SIX2Q9NPC8 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.95□□□□□ -1.78
SIX2Q9NPC8 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.95□□□□□ -1.78
SIX2Q9NPC8 AC010285.3-201ENST00000511668 676 ntBASIC3.95□□□□□ -1.78
SIX2Q9NPC8 RPS27AP18-201ENST00000515536 459 ntBASIC3.95□□□□□ -1.78
SIX2Q9NPC8 snoU109.6-201ENST00000516831 118 ntBASIC3.95□□□□□ -1.78
SIX2Q9NPC8 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.95□□□□□ -1.78
SIX2Q9NPC8 AP006245.1-201ENST00000522549 120 ntBASIC3.95□□□□□ -1.78
SIX2Q9NPC8 AC090281.1-201ENST00000523019 276 ntBASIC3.95□□□□□ -1.78
SIX2Q9NPC8 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.95□□□□□ -1.78
SIX2Q9NPC8 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.95□□□□□ -1.78
SIX2Q9NPC8 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SIX2Q9NPC8 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.95□□□□□ -1.78
SIX2Q9NPC8 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.95□□□□□ -1.78
SIX2Q9NPC8 TRAV15-201ENST00000556680 249 ntBASIC3.95□□□□□ -1.78
SIX2Q9NPC8 AC068714.1-201ENST00000559623 800 ntBASIC3.95□□□□□ -1.78
SIX2Q9NPC8 MIR3912-201ENST00000577566 105 ntBASIC3.95□□□□□ -1.78
SIX2Q9NPC8 MIR4738-201ENST00000579134 87 ntBASIC3.95□□□□□ -1.78
SIX2Q9NPC8 MIR4286-201ENST00000580651 93 ntBASIC3.95□□□□□ -1.78
SIX2Q9NPC8 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.95□□□□□ -1.78
SIX2Q9NPC8 AL353778.1-201ENST00000603149 408 ntBASIC3.95□□□□□ -1.78
SIX2Q9NPC8 AC005344.1-201ENST00000613391 459 ntBASIC3.95□□□□□ -1.78
SIX2Q9NPC8 AC107075.1-201ENST00000613695 314 ntBASIC3.95□□□□□ -1.78
SIX2Q9NPC8 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.95□□□□□ -1.78
SIX2Q9NPC8 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SIX2Q9NPC8 AC068831.8-201ENST00000620171 435 ntBASIC3.95□□□□□ -1.78
SIX2Q9NPC8 AL157770.1-201ENST00000623049 439 ntBASIC3.95□□□□□ -1.78
SIX2Q9NPC8 AC009039.2-201ENST00000624524 529 ntBASIC3.95□□□□□ -1.78
SIX2Q9NPC8 AC007656.2-201ENST00000624902 4547 ntBASIC3.95□□□□□ -1.78
SIX2Q9NPC8 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SIX2Q9NPC8 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.95□□□□□ -1.78
SIX2Q9NPC8 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SIX2Q9NPC8 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SIX2Q9NPC8 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SIX2Q9NPC8 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SIX2Q9NPC8 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SIX2Q9NPC8 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SIX2Q9NPC8 MTND5P25-201ENST00000430499 799 ntBASIC3.94□□□□□ -1.78
SIX2Q9NPC8 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.94□□□□□ -1.78
SIX2Q9NPC8 COX7BP2-201ENST00000437976 242 ntBASIC3.94□□□□□ -1.78
SIX2Q9NPC8 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.94□□□□□ -1.78
SIX2Q9NPC8 Z83846.1-201ENST00000446798 265 ntBASIC3.94□□□□□ -1.78
SIX2Q9NPC8 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
SIX2Q9NPC8 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.94□□□□□ -1.78
SIX2Q9NPC8 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms