Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HMG20AQ9NP66 MTND5P7-201ENST00000413558 1798 ntBASIC3.1□□□□□ -1.91
HMG20AQ9NP66 MTND5P11-201ENST00000511037 1812 ntBASIC3.09□□□□□ -1.91
HMG20AQ9NP66 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HMG20AQ9NP66 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HMG20AQ9NP66 METTL21EP-201ENST00000298105 713 ntBASIC3.09□□□□□ -1.91
HMG20AQ9NP66 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.09□□□□□ -1.91
HMG20AQ9NP66 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.09□□□□□ -1.91
HMG20AQ9NP66 AL590290.1-201ENST00000405336 380 ntBASIC3.09□□□□□ -1.91
HMG20AQ9NP66 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.09□□□□□ -1.91
HMG20AQ9NP66 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC3.09□□□□□ -1.91
HMG20AQ9NP66 AL158050.1-201ENST00000416077 457 ntBASIC3.09□□□□□ -1.91
HMG20AQ9NP66 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.09□□□□□ -1.91
HMG20AQ9NP66 AC234782.4-201ENST00000417646 1048 ntBASIC3.09□□□□□ -1.91
HMG20AQ9NP66 MTND2P15-201ENST00000418575 892 ntBASIC3.09□□□□□ -1.91
HMG20AQ9NP66 AL139247.1-201ENST00000422768 325 ntBASIC3.09□□□□□ -1.91
HMG20AQ9NP66 AL121882.1-201ENST00000422893 417 ntBASIC3.09□□□□□ -1.91
HMG20AQ9NP66 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.09□□□□□ -1.91
HMG20AQ9NP66 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.09□□□□□ -1.91
HMG20AQ9NP66 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.09□□□□□ -1.91
HMG20AQ9NP66 SLC31A1P1-201ENST00000451221 567 ntBASIC3.09□□□□□ -1.91
HMG20AQ9NP66 AC007967.1-201ENST00000455422 1159 ntBASIC3.09□□□□□ -1.91
HMG20AQ9NP66 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.09□□□□□ -1.91
HMG20AQ9NP66 U3.44-201ENST00000458938 192 ntBASIC3.09□□□□□ -1.91
HMG20AQ9NP66 AL133162.1-201ENST00000463228 453 ntBASIC3.09□□□□□ -1.91
HMG20AQ9NP66 RPL7P5-201ENST00000471472 736 ntBASIC3.09□□□□□ -1.91
HMG20AQ9NP66 AC023598.1-201ENST00000472521 361 ntBASIC3.09□□□□□ -1.91
HMG20AQ9NP66 AC023050.1-201ENST00000498198 304 ntBASIC3.09□□□□□ -1.91
HMG20AQ9NP66 MTATP6P22-201ENST00000507369 598 ntBASIC3.09□□□□□ -1.91
HMG20AQ9NP66 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.09□□□□□ -1.91
HMG20AQ9NP66 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.09□□□□□ -1.91
HMG20AQ9NP66 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.09□□□□□ -1.91
HMG20AQ9NP66 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.09□□□□□ -1.91
HMG20AQ9NP66 RNU1-143P-201ENST00000516296 146 ntBASIC3.09□□□□□ -1.91
HMG20AQ9NP66 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.09□□□□□ -1.91
HMG20AQ9NP66 AP004242.1-201ENST00000533701 349 ntBASIC3.09□□□□□ -1.91
HMG20AQ9NP66 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.09□□□□□ -1.91
HMG20AQ9NP66 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.09□□□□□ -1.91
HMG20AQ9NP66 OR4T1P-201ENST00000554933 911 ntBASIC3.09□□□□□ -1.91
HMG20AQ9NP66 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.09□□□□□ -1.91
HMG20AQ9NP66 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.09□□□□□ -1.91
HMG20AQ9NP66 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.09□□□□□ -1.91
HMG20AQ9NP66 NF1P5-201ENST00000588287 448 ntBASIC3.09□□□□□ -1.91
HMG20AQ9NP66 AC011468.4-201ENST00000603942 409 ntBASIC3.09□□□□□ -1.91
HMG20AQ9NP66 AC079610.2-201ENST00000604818 690 ntBASIC3.09□□□□□ -1.91
HMG20AQ9NP66 SNORA51-201ENST00000606420 132 ntBASIC3.09□□□□□ -1.91
HMG20AQ9NP66 RNU1-30P-201ENST00000606575 163 ntBASIC3.09□□□□□ -1.91
HMG20AQ9NP66 AC090912.3-201ENST00000609775 533 ntBASIC3.09□□□□□ -1.91
HMG20AQ9NP66 U1.23-201ENST00000610293 146 ntBASIC3.09□□□□□ -1.91
HMG20AQ9NP66 AC005156.1-201ENST00000613371 573 ntBASIC3.09□□□□□ -1.91
HMG20AQ9NP66 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.09□□□□□ -1.91
HMG20AQ9NP66 RNU1-68P-201ENST00000615382 146 ntBASIC3.09□□□□□ -1.91
HMG20AQ9NP66 U1.39-201ENST00000621562 146 ntBASIC3.09□□□□□ -1.91
HMG20AQ9NP66 AC083865.1-201ENST00000636634 831 ntBASIC3.09□□□□□ -1.91
HMG20AQ9NP66 MTND4P31-201ENST00000425607 1343 ntBASIC3.09□□□□□ -1.91
HMG20AQ9NP66 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
HMG20AQ9NP66 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HMG20AQ9NP66 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.08□□□□□ -1.92
HMG20AQ9NP66 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
HMG20AQ9NP66 RNU6-481P-201ENST00000384194 107 ntBASIC3.08□□□□□ -1.92
HMG20AQ9NP66 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.08□□□□□ -1.92
HMG20AQ9NP66 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.08□□□□□ -1.92
HMG20AQ9NP66 HMGB3P31-201ENST00000413333 595 ntBASIC3.08□□□□□ -1.92
HMG20AQ9NP66 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.08□□□□□ -1.92
HMG20AQ9NP66 MTND2P16-201ENST00000419987 799 ntBASIC3.08□□□□□ -1.92
HMG20AQ9NP66 EIF2S2P3-201ENST00000428356 999 ntBASIC3.08□□□□□ -1.92
HMG20AQ9NP66 AL645931.1-201ENST00000439737 410 ntBASIC3.08□□□□□ -1.92
HMG20AQ9NP66 RPS26P30-201ENST00000443431 335 ntBASIC3.08□□□□□ -1.92
HMG20AQ9NP66 UQCRHP3-201ENST00000451503 251 ntBASIC3.08□□□□□ -1.92
HMG20AQ9NP66 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.08□□□□□ -1.92
HMG20AQ9NP66 RPL5P23-201ENST00000496040 868 ntBASIC3.08□□□□□ -1.92
HMG20AQ9NP66 AC093853.1-201ENST00000515689 483 ntBASIC3.08□□□□□ -1.92
HMG20AQ9NP66 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.08□□□□□ -1.92
HMG20AQ9NP66 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.08□□□□□ -1.92
HMG20AQ9NP66 HIGD1AP5-201ENST00000529959 259 ntBASIC3.08□□□□□ -1.92
HMG20AQ9NP66 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.08□□□□□ -1.92
HMG20AQ9NP66 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.08□□□□□ -1.92
HMG20AQ9NP66 AC090751.1-201ENST00000566966 267 ntBASIC3.08□□□□□ -1.92
HMG20AQ9NP66 RN7SL703P-201ENST00000578485 302 ntBASIC3.08□□□□□ -1.92
HMG20AQ9NP66 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.08□□□□□ -1.92
HMG20AQ9NP66 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HMG20AQ9NP66 AC006116.7-201ENST00000590141 756 ntBASIC3.08□□□□□ -1.92
HMG20AQ9NP66 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.08□□□□□ -1.92
HMG20AQ9NP66 RMST_10.1-201ENST00000616309 154 ntBASIC3.08□□□□□ -1.92
HMG20AQ9NP66 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.08□□□□□ -1.92
HMG20AQ9NP66 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.08□□□□□ -1.92
HMG20AQ9NP66 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HMG20AQ9NP66 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
HMG20AQ9NP66 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.08□□□□□ -1.92
HMG20AQ9NP66 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.08□□□□□ -1.92
HMG20AQ9NP66 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
HMG20AQ9NP66 NMD3P1-201ENST00000439704 1488 ntBASIC3.08□□□□□ -1.92
HMG20AQ9NP66 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.08□□□□□ -1.92
HMG20AQ9NP66 HSPA8P19-201ENST00000505359 1517 ntBASIC3.08□□□□□ -1.92
HMG20AQ9NP66 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
HMG20AQ9NP66 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
HMG20AQ9NP66 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HMG20AQ9NP66 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
HMG20AQ9NP66 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.07□□□□□ -1.92
HMG20AQ9NP66 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms