Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PCDH9Q9HC56 MIR3974-201ENST00000637126 96 ntBASIC4.19□□□□□ -1.74
PCDH9Q9HC56 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDH9Q9HC56 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDH9Q9HC56 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDH9Q9HC56 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDH9Q9HC56 AC109315.1-201ENST00000584143 1347 ntBASIC4.19□□□□□ -1.74
PCDH9Q9HC56 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDH9Q9HC56 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.18□□□□□ -1.74
PCDH9Q9HC56 LINC02471-203ENST00000641941 4752 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PCDH9Q9HC56 RNU6-839P-201ENST00000363347 108 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 Y_RNA.408-201ENST00000383987 102 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 RNU6-1300P-201ENST00000391046 108 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 TMSB4XP8-201ENST00000402089 135 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 AL049693.1-201ENST00000402760 611 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.18□□□□□ -1.74
PCDH9Q9HC56 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.18□□□□□ -1.74
PCDH9Q9HC56 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 TMSB4XP6-201ENST00000415187 135 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 AL391219.1-201ENST00000422570 483 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 TMSB4XP1-201ENST00000424567 135 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 RPL7P44-201ENST00000424827 742 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDH9Q9HC56 COX6CP15-201ENST00000426313 211 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 FTH1P6-201ENST00000430768 320 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 AL358472.1-201ENST00000431295 329 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.18□□□□□ -1.74
PCDH9Q9HC56 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 ATP5HP2-201ENST00000433885 485 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 AC096638.2-201ENST00000434965 711 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDH9Q9HC56 AL356535.1-201ENST00000440335 398 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 MTND5P2-201ENST00000442927 1142 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDH9Q9HC56 TPT1P12-201ENST00000448968 492 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 RFC5P1-201ENST00000454419 874 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 RNU7-125P-201ENST00000458760 62 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 RPL7P1-201ENST00000468161 747 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 RPL7P9-201ENST00000468715 747 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 AP000926.1-201ENST00000479573 241 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 AC069499.1-201ENST00000489433 509 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.18□□□□□ -1.74
PCDH9Q9HC56 AC105313.1-201ENST00000509121 353 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.18□□□□□ -1.74
PCDH9Q9HC56 AF279873.1-201ENST00000523393 313 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.18□□□□□ -1.74
PCDH9Q9HC56 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDH9Q9HC56 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.18□□□□□ -1.74
PCDH9Q9HC56 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDH9Q9HC56 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDH9Q9HC56 AL360157.1-201ENST00000565962 87 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 MIR4458-201ENST00000578872 75 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.18□□□□□ -1.74
PCDH9Q9HC56 AC010620.1-201ENST00000601088 1102 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 AL450489.1-201ENST00000612071 468 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 AL139418.1-201ENST00000613613 177 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 AC004943.3-201ENST00000624116 600 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 AL356121.2-201ENST00000624715 780 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 AC010608.2-201ENST00000624830 470 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 MIR4278-201ENST00000636094 69 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 OR8B1P-202ENST00000641132 1178 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 OR52H1-202ENST00000641796 1061 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PCDH9Q9HC56 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PCDH9Q9HC56 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.18□□□□□ -1.74
PCDH9Q9HC56 AP000776.1-201ENST00000530032 1663 ntBASIC4.18□□□□□ -1.74
PCDH9Q9HC56 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.18□□□□□ -1.74
PCDH9Q9HC56 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PCDH9Q9HC56 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PCDH9Q9HC56 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PCDH9Q9HC56 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PCDH9Q9HC56 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PCDH9Q9HC56 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
PCDH9Q9HC56 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.17□□□□□ -1.74
PCDH9Q9HC56 AC090229.1-201ENST00000590983 1609 ntBASIC4.17□□□□□ -1.74
PCDH9Q9HC56 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
PCDH9Q9HC56 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.17□□□□□ -1.74
PCDH9Q9HC56 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.17□□□□□ -1.74
PCDH9Q9HC56 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PCDH9Q9HC56 AL512646.1-201ENST00000269395 1077 ntBASIC4.17□□□□□ -1.74
PCDH9Q9HC56 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PCDH9Q9HC56 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PCDH9Q9HC56 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PCDH9Q9HC56 RNU6-582P-201ENST00000362989 107 ntBASIC4.17□□□□□ -1.74
PCDH9Q9HC56 SNORD35B-201ENST00000363660 87 ntBASIC4.17□□□□□ -1.74
PCDH9Q9HC56 RSL24D1P4-201ENST00000400938 484 ntBASIC4.17□□□□□ -1.74
PCDH9Q9HC56 RPL23AP47-201ENST00000408017 460 ntBASIC4.17□□□□□ -1.74
PCDH9Q9HC56 RNU4-72P-201ENST00000410754 173 ntBASIC4.17□□□□□ -1.74
PCDH9Q9HC56 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDH9Q9HC56 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDH9Q9HC56 AC009965.2-201ENST00000425328 970 ntBASIC4.17□□□□□ -1.74
PCDH9Q9HC56 AL593851.1-201ENST00000426171 157 ntBASIC4.17□□□□□ -1.74
PCDH9Q9HC56 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDH9Q9HC56 AL354941.1-201ENST00000438600 464 ntBASIC4.17□□□□□ -1.74
PCDH9Q9HC56 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDH9Q9HC56 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PCDH9Q9HC56 RAB11AP1-201ENST00000442978 646 ntBASIC4.17□□□□□ -1.74
PCDH9Q9HC56 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDH9Q9HC56 RPL23AP15-201ENST00000450202 459 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms