Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 RPS26P40-201ENST00000435209 294 ntBASIC5.5□□□□□ -1.53
FOXP3Q9BZS1 RPS3AP54-201ENST00000435535 734 ntBASIC5.5□□□□□ -1.53
FOXP3Q9BZS1 TAAR7P-201ENST00000436141 242 ntBASIC5.5□□□□□ -1.53
FOXP3Q9BZS1 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC5.5□□□□□ -1.53
FOXP3Q9BZS1 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC5.5□□□□□ -1.53
FOXP3Q9BZS1 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC5.5□□□□□ -1.53
FOXP3Q9BZS1 AC092754.1-201ENST00000472975 479 ntBASIC5.5□□□□□ -1.53
FOXP3Q9BZS1 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
FOXP3Q9BZS1 AC008953.1-201ENST00000497334 318 ntBASIC5.5□□□□□ -1.53
FOXP3Q9BZS1 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC5.5□□□□□ -1.53
FOXP3Q9BZS1 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.5□□□□□ -1.53
FOXP3Q9BZS1 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
FOXP3Q9BZS1 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.5□□□□□ -1.53
FOXP3Q9BZS1 BRD9P1-201ENST00000529855 560 ntBASIC5.5□□□□□ -1.53
FOXP3Q9BZS1 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.5□□□□□ -1.53
FOXP3Q9BZS1 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.5□□□□□ -1.53
FOXP3Q9BZS1 HSPE1P3-201ENST00000559254 309 ntBASIC5.5□□□□□ -1.53
FOXP3Q9BZS1 MRPS21P7-201ENST00000566937 238 ntBASIC5.5□□□□□ -1.53
FOXP3Q9BZS1 AC015720.2-201ENST00000567709 334 ntBASIC5.5□□□□□ -1.53
FOXP3Q9BZS1 AC018638.8-201ENST00000588755 281 ntBASIC5.5□□□□□ -1.53
FOXP3Q9BZS1 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.5□□□□□ -1.53
FOXP3Q9BZS1 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
FOXP3Q9BZS1 MIR98-201ENST00000606724 119 ntBASIC5.5□□□□□ -1.53
FOXP3Q9BZS1 AC068722.2-201ENST00000618734 544 ntBASIC5.5□□□□□ -1.53
FOXP3Q9BZS1 AL158801.5-201ENST00000623123 465 ntBASIC5.5□□□□□ -1.53
FOXP3Q9BZS1 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
FOXP3Q9BZS1 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
FOXP3Q9BZS1 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
FOXP3Q9BZS1 AL606537.1-201ENST00000607258 2011 ntBASIC5.5□□□□□ -1.53
FOXP3Q9BZS1 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
FOXP3Q9BZS1 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
FOXP3Q9BZS1 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
FOXP3Q9BZS1 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 AC093775.1-201ENST00000624154 1868 ntBASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 SYF2-202ENST00000354361 926 ntTSL 2 BASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 RNA5SP319-201ENST00000362768 119 ntBASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 Y_RNA.166-201ENST00000363730 102 ntBASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 RNA5SP234-201ENST00000363916 119 ntBASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 SNORD81.2-201ENST00000365153 76 ntBASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 Y_RNA.326-201ENST00000365176 113 ntBASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 AC009804.1-201ENST00000400949 179 ntBASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 RPL7P25-201ENST00000404151 721 ntBASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 CTSL3P-202ENST00000412179 788 ntBASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 PDCL2P1-201ENST00000419302 352 ntBASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 AC104837.2-201ENST00000427236 424 ntBASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 OR51AB1P-201ENST00000429046 620 ntBASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 AC010881.1-201ENST00000433830 235 ntBASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 SEPT14P3-201ENST00000439401 183 ntBASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 AL732372.2-207ENST00000445840 183 ntBASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 SEPT14P2-201ENST00000453405 183 ntBASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 AL035090.1-201ENST00000454835 332 ntBASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 RPL7AP52-201ENST00000458096 790 ntBASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 AC079168.1-201ENST00000458741 345 ntBASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 AC093270.2-201ENST00000486157 792 ntBASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 FAM172BP-201ENST00000487497 1089 ntBASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 RN7SL814P-201ENST00000487715 300 ntBASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 RN7SL30P-201ENST00000488416 306 ntBASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 AC006499.3-201ENST00000506077 748 ntBASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 SEPT14P4-201ENST00000513445 186 ntBASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 RNU6-488P-201ENST00000515918 99 ntBASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 FO082796.1-201ENST00000523795 183 ntBASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 OR10G5P-201ENST00000532733 358 ntBASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 SUB1P2-201ENST00000556401 297 ntBASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 VN1R80P-201ENST00000597126 338 ntBASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 AC008687.2-201ENST00000597865 520 ntBASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.49□□□□□ -1.53
FOXP3Q9BZS1 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms