Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.84□□□□□ -1.79
ABCA3Q99758 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.84□□□□□ -1.79
ABCA3Q99758 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.84□□□□□ -1.79
ABCA3Q99758 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
ABCA3Q99758 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.84□□□□□ -1.79
ABCA3Q99758 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.84□□□□□ -1.79
ABCA3Q99758 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.84□□□□□ -1.79
ABCA3Q99758 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.84□□□□□ -1.79
ABCA3Q99758 AC022031.1-201ENST00000585985 2593 ntBASIC3.84□□□□□ -1.79
ABCA3Q99758 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
ABCA3Q99758 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.84□□□□□ -1.8
ABCA3Q99758 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
ABCA3Q99758 AC110754.1-201ENST00000399740 601 ntBASIC3.84□□□□□ -1.8
ABCA3Q99758 AL603825.1-201ENST00000438481 80 ntBASIC3.84□□□□□ -1.8
ABCA3Q99758 AC104058.1-201ENST00000448028 297 ntBASIC3.84□□□□□ -1.8
ABCA3Q99758 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.84□□□□□ -1.8
ABCA3Q99758 AC090525.1-201ENST00000479116 478 ntBASIC3.84□□□□□ -1.8
ABCA3Q99758 IGLVIV-53-201ENST00000520107 367 ntBASIC3.84□□□□□ -1.8
ABCA3Q99758 MIR4425-201ENST00000580572 84 ntBASIC3.84□□□□□ -1.8
ABCA3Q99758 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.84□□□□□ -1.8
ABCA3Q99758 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
ABCA3Q99758 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
ABCA3Q99758 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.83□□□□□ -1.8
ABCA3Q99758 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
ABCA3Q99758 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.83□□□□□ -1.8
ABCA3Q99758 MIR196B-201ENST00000384852 84 ntBASIC3.83□□□□□ -1.8
ABCA3Q99758 MIR887-201ENST00000401258 79 ntBASIC3.83□□□□□ -1.8
ABCA3Q99758 AC009963.1-201ENST00000417265 157 ntBASIC3.83□□□□□ -1.8
ABCA3Q99758 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.83□□□□□ -1.8
ABCA3Q99758 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.83□□□□□ -1.8
ABCA3Q99758 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.83□□□□□ -1.8
ABCA3Q99758 AC008126.1-201ENST00000549019 480 ntBASIC3.83□□□□□ -1.8
ABCA3Q99758 AC087468.1-201ENST00000604365 630 ntBASIC3.83□□□□□ -1.8
ABCA3Q99758 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.83□□□□□ -1.8
ABCA3Q99758 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ABCA3Q99758 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
ABCA3Q99758 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ABCA3Q99758 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.82□□□□□ -1.8
ABCA3Q99758 XIST-201ENST00000416330 750 ntTSL 2 BASIC3.82□□□□□ -1.8
ABCA3Q99758 AC233981.1-201ENST00000423224 461 ntBASIC3.82□□□□□ -1.8
ABCA3Q99758 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ABCA3Q99758 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ABCA3Q99758 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC3.82□□□□□ -1.8
ABCA3Q99758 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.82□□□□□ -1.8
ABCA3Q99758 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ABCA3Q99758 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
ABCA3Q99758 AC105402.1-201ENST00000413336 545 ntBASIC3.81□□□□□ -1.8
ABCA3Q99758 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.81□□□□□ -1.8
ABCA3Q99758 MTCO3P20-201ENST00000454926 688 ntBASIC3.81□□□□□ -1.8
ABCA3Q99758 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.81□□□□□ -1.8
ABCA3Q99758 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.81□□□□□ -1.8
ABCA3Q99758 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC3.81□□□□□ -1.8
ABCA3Q99758 SCGB1D5P-201ENST00000515134 247 ntBASIC3.81□□□□□ -1.8
ABCA3Q99758 AC073476.4-201ENST00000628409 72 ntBASIC3.81□□□□□ -1.8
ABCA3Q99758 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.81□□□□□ -1.8
ABCA3Q99758 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
ABCA3Q99758 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ABCA3Q99758 AL138827.1-201ENST00000402666 306 ntBASIC3.81□□□□□ -1.8
ABCA3Q99758 RPL23AP48-201ENST00000406913 488 ntBASIC3.81□□□□□ -1.8
ABCA3Q99758 RN7SKP223-201ENST00000410582 62 ntBASIC3.81□□□□□ -1.8
ABCA3Q99758 AC005189.1-201ENST00000431286 310 ntBASIC3.81□□□□□ -1.8
ABCA3Q99758 AL162389.1-201ENST00000449233 177 ntBASIC3.81□□□□□ -1.8
ABCA3Q99758 AL590639.1-201ENST00000456484 337 ntBASIC3.81□□□□□ -1.8
ABCA3Q99758 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.81□□□□□ -1.8
ABCA3Q99758 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.81□□□□□ -1.8
ABCA3Q99758 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.81□□□□□ -1.8
ABCA3Q99758 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.81□□□□□ -1.8
ABCA3Q99758 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.81□□□□□ -1.8
ABCA3Q99758 MIR6817-201ENST00000615588 66 ntBASIC3.81□□□□□ -1.8
ABCA3Q99758 AL158196.1-201ENST00000616786 434 ntBASIC3.81□□□□□ -1.8
ABCA3Q99758 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.81□□□□□ -1.8
ABCA3Q99758 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
ABCA3Q99758 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ABCA3Q99758 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ABCA3Q99758 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.8□□□□□ -1.8
ABCA3Q99758 MIR764-201ENST00000390811 85 ntBASIC3.8□□□□□ -1.8
ABCA3Q99758 HSPD1P16-201ENST00000402302 394 ntBASIC3.8□□□□□ -1.8
ABCA3Q99758 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.8□□□□□ -1.8
ABCA3Q99758 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.8□□□□□ -1.8
ABCA3Q99758 AC008413.1-201ENST00000511864 177 ntBASIC3.8□□□□□ -1.8
ABCA3Q99758 EEF1A1P37-201ENST00000522748 715 ntBASIC3.8□□□□□ -1.8
ABCA3Q99758 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ABCA3Q99758 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.8□□□□□ -1.8
ABCA3Q99758 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.8□□□□□ -1.8
ABCA3Q99758 ATP5F1P7-201ENST00000567330 760 ntBASIC3.8□□□□□ -1.8
ABCA3Q99758 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.8□□□□□ -1.8
ABCA3Q99758 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
ABCA3Q99758 AC009159.1-201ENST00000618386 642 ntBASIC3.8□□□□□ -1.8
ABCA3Q99758 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ABCA3Q99758 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
ABCA3Q99758 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ABCA3Q99758 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ABCA3Q99758 LAP3P1-201ENST00000403648 294 ntBASIC3.79□□□□□ -1.8
ABCA3Q99758 RN7SKP192-201ENST00000411291 327 ntBASIC3.79□□□□□ -1.8
ABCA3Q99758 CBX1P4-201ENST00000439415 457 ntBASIC3.79□□□□□ -1.8
ABCA3Q99758 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.79□□□□□ -1.8
ABCA3Q99758 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.79□□□□□ -1.8
ABCA3Q99758 AP001636.2-201ENST00000525517 696 ntBASIC3.79□□□□□ -1.8
ABCA3Q99758 AC107016.2-201ENST00000547968 190 ntBASIC3.79□□□□□ -1.8
ABCA3Q99758 AC090312.2-201ENST00000582687 378 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms