Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 DBIP1-201ENST00000401435 260 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 AL590084.1-201ENST00000407885 387 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 MIR548F3-201ENST00000408509 87 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 RNU2-62P-201ENST00000410868 191 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 RNU2-72P-201ENST00000411175 163 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 OR5AW1P-201ENST00000426334 1006 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 RPL34P27-201ENST00000428810 349 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 AL445687.2-201ENST00000458156 728 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 AC092902.1-201ENST00000486999 259 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 MTCO3P28-201ENST00000513351 515 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 RN7SKP265-201ENST00000516448 223 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 IGLVIV-66-1-201ENST00000521832 460 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 AC007834.2-201ENST00000536310 343 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 AC007346.2-201ENST00000564816 892 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 AC119751.7-201ENST00000600494 245 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 AL592494.3-201ENST00000609485 464 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 ZNF365-211ENST00000614806 877 ntTSL 5 BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 AP003122.6-201ENST00000623831 495 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 AC090582.1-201ENST00000636321 199 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 THSD7B-203ENST00000413152 5846 ntTSL 5 BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 AC105046.1-201ENST00000566457 4997 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 ATMIN-206ENST00000566488 5343 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 ACAN-206ENST00000559004 7628 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 PRKG1-203ENST00000373980 6928 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 PRPF40A-202ENST00000410080 8048 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 SH3GLB1-203ENST00000535010 6227 ntTSL 2 BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 RNU6-1145P-201ENST00000384246 107 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 DNAJA1P1-201ENST00000425106 1187 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 AL022237.1-201ENST00000446663 358 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 AL162591.2-201ENST00000449634 317 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 AL121877.1-201ENST00000453704 622 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 AC021087.2-201ENST00000504656 1203 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 AC104090.1-201ENST00000506341 1171 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 MTCO1P31-201ENST00000506355 492 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 AC105384.2-201ENST00000508433 640 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 RN7SKP276-201ENST00000516242 268 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 RNU6-977P-201ENST00000516411 103 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 Y_RNA.722-201ENST00000517279 114 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 AC106785.3-201ENST00000564064 847 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 ROCK1P1-201ENST00000573767 549 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 FAM60BP-201ENST00000578364 658 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 RN7SL703P-201ENST00000578485 302 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 AC022884.2-201ENST00000578535 580 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 AC006557.5-201ENST00000603126 811 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 AC145423.1-201ENST00000605712 336 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 AC018926.1-201ENST00000616335 435 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 AC097460.3-201ENST00000623099 442 ntBASIC1.59□□□□□ -2.16
HMCN1Q96RW7 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
HMCN1Q96RW7 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AC118273.1-201ENST00000525324 3006 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 FBN2-201ENST00000262464 10724 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 Y_RNA.558-201ENST00000384685 113 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
HMCN1Q96RW7 AL356057.3-201ENST00000402607 340 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 RNU2-23P-201ENST00000410545 195 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 RNU6-592P-201ENST00000411333 103 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 VN1R21P-201ENST00000426703 765 ntBASIC1.58□□□□□ -2.16
HMCN1Q96RW7 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms