Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 DNAJC19P6-201ENST00000401853 280 ntBASIC2.42□□□□□ -2.02
AP1S3Q96PC3 RN7SKP111-201ENST00000410349 271 ntBASIC2.42□□□□□ -2.02
AP1S3Q96PC3 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC2.42□□□□□ -2.02
AP1S3Q96PC3 TCEA1P4-201ENST00000415066 844 ntBASIC2.42□□□□□ -2.02
AP1S3Q96PC3 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC2.42□□□□□ -2.02
AP1S3Q96PC3 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.42□□□□□ -2.02
AP1S3Q96PC3 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.42□□□□□ -2.02
AP1S3Q96PC3 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC2.42□□□□□ -2.02
AP1S3Q96PC3 ETF1P3-201ENST00000430422 1160 ntBASIC2.42□□□□□ -2.02
AP1S3Q96PC3 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC2.42□□□□□ -2.02
AP1S3Q96PC3 AC069540.1-201ENST00000446320 988 ntBASIC2.42□□□□□ -2.02
AP1S3Q96PC3 TPT1P12-201ENST00000448968 492 ntBASIC2.42□□□□□ -2.02
AP1S3Q96PC3 Z99714.1-201ENST00000450463 807 ntBASIC2.42□□□□□ -2.02
AP1S3Q96PC3 AL513343.1-201ENST00000451818 792 ntBASIC2.42□□□□□ -2.02
AP1S3Q96PC3 AC073387.1-201ENST00000453261 709 ntBASIC2.42□□□□□ -2.02
AP1S3Q96PC3 HMGB1P25-201ENST00000468402 607 ntBASIC2.42□□□□□ -2.02
AP1S3Q96PC3 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC2.42□□□□□ -2.02
AP1S3Q96PC3 MTCO3P35-201ENST00000485582 781 ntBASIC2.42□□□□□ -2.02
AP1S3Q96PC3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.42□□□□□ -2.02
AP1S3Q96PC3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.42□□□□□ -2.02
AP1S3Q96PC3 HMGB1P22-201ENST00000505315 124 ntBASIC2.42□□□□□ -2.02
AP1S3Q96PC3 HSPD1P15-201ENST00000505573 1122 ntBASIC2.42□□□□□ -2.02
AP1S3Q96PC3 ARL4AP2-201ENST00000507378 601 ntBASIC2.42□□□□□ -2.02
AP1S3Q96PC3 SNORA70.17-201ENST00000516449 133 ntBASIC2.42□□□□□ -2.02
AP1S3Q96PC3 RNU6-711P-201ENST00000517255 106 ntBASIC2.42□□□□□ -2.02
AP1S3Q96PC3 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.42□□□□□ -2.02
AP1S3Q96PC3 IGKV2D-10-201ENST00000520194 281 ntBASIC2.42□□□□□ -2.02
AP1S3Q96PC3 AC007991.1-201ENST00000522680 631 ntBASIC2.42□□□□□ -2.02
AP1S3Q96PC3 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC2.42□□□□□ -2.02
AP1S3Q96PC3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.42□□□□□ -2.02
AP1S3Q96PC3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.42□□□□□ -2.02
AP1S3Q96PC3 PARP1P2-201ENST00000556806 195 ntBASIC2.42□□□□□ -2.02
AP1S3Q96PC3 CSNK1A1P1-202ENST00000563423 981 ntBASIC2.42□□□□□ -2.02
AP1S3Q96PC3 AC023043.3-201ENST00000593113 385 ntBASIC2.42□□□□□ -2.02
AP1S3Q96PC3 AC012119.1-201ENST00000603184 222 ntBASIC2.42□□□□□ -2.02
AP1S3Q96PC3 AC069234.5-201ENST00000611056 416 ntBASIC2.42□□□□□ -2.02
AP1S3Q96PC3 ZYXP1-201ENST00000617638 118 ntBASIC2.42□□□□□ -2.02
AP1S3Q96PC3 MIR6864-201ENST00000617935 70 ntBASIC2.42□□□□□ -2.02
AP1S3Q96PC3 AL133370.2-201ENST00000619934 439 ntBASIC2.42□□□□□ -2.02
AP1S3Q96PC3 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.42□□□□□ -2.02
AP1S3Q96PC3 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
AP1S3Q96PC3 GABRG2-229ENST00000641017 3628 ntBASIC2.42□□□□□ -2.02
AP1S3Q96PC3 CR383658.2-201ENST00000547576 1525 ntBASIC2.42□□□□□ -2.02
AP1S3Q96PC3 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.41□□□□□ -2.02
AP1S3Q96PC3 AL645937.1-201ENST00000641739 1652 ntBASIC2.41□□□□□ -2.02
AP1S3Q96PC3 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
AP1S3Q96PC3 RNA5SP51-201ENST00000364750 119 ntBASIC2.41□□□□□ -2.02
AP1S3Q96PC3 SNORA46-201ENST00000384762 135 ntBASIC2.41□□□□□ -2.02
AP1S3Q96PC3 AC109780.2-201ENST00000413467 845 ntBASIC2.41□□□□□ -2.02
AP1S3Q96PC3 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
AP1S3Q96PC3 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC2.41□□□□□ -2.02
AP1S3Q96PC3 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.41□□□□□ -2.02
AP1S3Q96PC3 DBIP2-201ENST00000419076 262 ntBASIC2.41□□□□□ -2.02
AP1S3Q96PC3 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.41□□□□□ -2.02
AP1S3Q96PC3 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC2.41□□□□□ -2.02
AP1S3Q96PC3 AC016712.1-201ENST00000431088 378 ntBASIC2.41□□□□□ -2.02
AP1S3Q96PC3 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.41□□□□□ -2.02
AP1S3Q96PC3 MTCYBP14-201ENST00000457471 715 ntBASIC2.41□□□□□ -2.02
AP1S3Q96PC3 RPL5P13-201ENST00000462840 709 ntBASIC2.41□□□□□ -2.02
AP1S3Q96PC3 RPL5P24-201ENST00000463742 885 ntBASIC2.41□□□□□ -2.02
AP1S3Q96PC3 NDUFA5P9-201ENST00000472609 340 ntBASIC2.41□□□□□ -2.02
AP1S3Q96PC3 RPL23AP11-201ENST00000475260 469 ntBASIC2.41□□□□□ -2.02
AP1S3Q96PC3 AC026979.1-201ENST00000492525 396 ntBASIC2.41□□□□□ -2.02
AP1S3Q96PC3 AC010285.3-201ENST00000511668 676 ntBASIC2.41□□□□□ -2.02
AP1S3Q96PC3 SCARNA20.6-201ENST00000517251 106 ntBASIC2.41□□□□□ -2.02
AP1S3Q96PC3 TRMT10BP1-201ENST00000519377 943 ntBASIC2.41□□□□□ -2.02
AP1S3Q96PC3 AP001207.1-201ENST00000524051 481 ntBASIC2.41□□□□□ -2.02
AP1S3Q96PC3 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.41□□□□□ -2.02
AP1S3Q96PC3 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC2.41□□□□□ -2.02
AP1S3Q96PC3 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC2.41□□□□□ -2.02
AP1S3Q96PC3 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
AP1S3Q96PC3 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
AP1S3Q96PC3 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC2.41□□□□□ -2.02
AP1S3Q96PC3 RN7SL703P-201ENST00000578485 302 ntBASIC2.41□□□□□ -2.02
AP1S3Q96PC3 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC2.41□□□□□ -2.02
AP1S3Q96PC3 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.41□□□□□ -2.02
AP1S3Q96PC3 uc_338.1-201ENST00000612113 180 ntBASIC2.41□□□□□ -2.02
AP1S3Q96PC3 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC2.41□□□□□ -2.02
AP1S3Q96PC3 AL356321.1-201ENST00000621360 228 ntBASIC2.41□□□□□ -2.02
AP1S3Q96PC3 AC091903.1-201ENST00000624322 454 ntBASIC2.41□□□□□ -2.02
AP1S3Q96PC3 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC2.41□□□□□ -2.02
AP1S3Q96PC3 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.41□□□□□ -2.02
AP1S3Q96PC3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
AP1S3Q96PC3 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.41□□□□□ -2.02
AP1S3Q96PC3 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
AP1S3Q96PC3 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.02
AP1S3Q96PC3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
AP1S3Q96PC3 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
AP1S3Q96PC3 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.4□□□□□ -2.03
AP1S3Q96PC3 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
AP1S3Q96PC3 RPL32P3-201ENST00000359025 275 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 SNORD65-201ENST00000391079 73 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 RPL21P75-201ENST00000396599 483 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 RPL21P28-201ENST00000401418 483 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 AL592114.1-201ENST00000403842 483 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 HNRNPDP2-201ENST00000406475 478 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 RNA5SP498-201ENST00000411342 120 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 RAD23BP2-201ENST00000416003 1207 ntBASIC2.4□□□□□ -2.03
AP1S3Q96PC3 RFESDP1-201ENST00000422350 461 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms