Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 PDSS1P2-201ENST00000449397 678 ntBASIC3.67□□□□□ -1.82
RPRD1AQ96P16 RPL23AP15-201ENST00000450202 459 ntBASIC3.67□□□□□ -1.82
RPRD1AQ96P16 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.67□□□□□ -1.82
RPRD1AQ96P16 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.67□□□□□ -1.82
RPRD1AQ96P16 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.67□□□□□ -1.82
RPRD1AQ96P16 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.67□□□□□ -1.82
RPRD1AQ96P16 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.67□□□□□ -1.82
RPRD1AQ96P16 AC006499.5-201ENST00000505037 514 ntBASIC3.67□□□□□ -1.82
RPRD1AQ96P16 AC008885.2-201ENST00000509506 930 ntBASIC3.67□□□□□ -1.82
RPRD1AQ96P16 TMEM248P1-201ENST00000510579 951 ntBASIC3.67□□□□□ -1.82
RPRD1AQ96P16 AC021146.1-201ENST00000511202 716 ntBASIC3.67□□□□□ -1.82
RPRD1AQ96P16 AC016065.2-201ENST00000514530 444 ntBASIC3.67□□□□□ -1.82
RPRD1AQ96P16 RNU6-579P-201ENST00000516879 102 ntBASIC3.67□□□□□ -1.82
RPRD1AQ96P16 SNORA76.2-201ENST00000517095 137 ntBASIC3.67□□□□□ -1.82
RPRD1AQ96P16 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.67□□□□□ -1.82
RPRD1AQ96P16 OR5B10P-201ENST00000532869 642 ntBASIC3.67□□□□□ -1.82
RPRD1AQ96P16 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.67□□□□□ -1.82
RPRD1AQ96P16 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.67□□□□□ -1.82
RPRD1AQ96P16 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.67□□□□□ -1.82
RPRD1AQ96P16 AC099489.2-201ENST00000574976 260 ntBASIC3.67□□□□□ -1.82
RPRD1AQ96P16 MIR4444-1-201ENST00000581696 74 ntBASIC3.67□□□□□ -1.82
RPRD1AQ96P16 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.67□□□□□ -1.82
RPRD1AQ96P16 MIR4444-2-201ENST00000584390 74 ntBASIC3.67□□□□□ -1.82
RPRD1AQ96P16 MIR3922-201ENST00000585192 84 ntBASIC3.67□□□□□ -1.82
RPRD1AQ96P16 AC008739.3-201ENST00000603262 127 ntBASIC3.67□□□□□ -1.82
RPRD1AQ96P16 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.67□□□□□ -1.82
RPRD1AQ96P16 AC090425.2-201ENST00000608818 501 ntBASIC3.67□□□□□ -1.82
RPRD1AQ96P16 MIR7851-201ENST00000610611 160 ntBASIC3.67□□□□□ -1.82
RPRD1AQ96P16 AC099778.2-201ENST00000610904 211 ntBASIC3.67□□□□□ -1.82
RPRD1AQ96P16 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.67□□□□□ -1.82
RPRD1AQ96P16 U4.6-201ENST00000621618 127 ntBASIC3.67□□□□□ -1.82
RPRD1AQ96P16 AC243312.2-201ENST00000623340 601 ntBASIC3.67□□□□□ -1.82
RPRD1AQ96P16 AP006248.3-201ENST00000623580 594 ntBASIC3.67□□□□□ -1.82
RPRD1AQ96P16 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RPRD1AQ96P16 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
RPRD1AQ96P16 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.67□□□□□ -1.82
RPRD1AQ96P16 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RPRD1AQ96P16 AL365440.1-201ENST00000436135 2167 ntBASIC3.66□□□□□ -1.82
RPRD1AQ96P16 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.66□□□□□ -1.82
RPRD1AQ96P16 AC116096.1-201ENST00000566804 2314 ntBASIC3.66□□□□□ -1.82
RPRD1AQ96P16 SEC63P2-201ENST00000503863 1939 ntBASIC3.66□□□□□ -1.82
RPRD1AQ96P16 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RPRD1AQ96P16 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
RPRD1AQ96P16 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.66□□□□□ -1.82
RPRD1AQ96P16 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RPRD1AQ96P16 EI24P1-201ENST00000416584 867 ntBASIC3.66□□□□□ -1.82
RPRD1AQ96P16 AC127526.1-201ENST00000417526 366 ntBASIC3.66□□□□□ -1.82
RPRD1AQ96P16 AL389915.1-201ENST00000422463 466 ntBASIC3.66□□□□□ -1.82
RPRD1AQ96P16 AC073310.1-201ENST00000423226 1033 ntBASIC3.66□□□□□ -1.82
RPRD1AQ96P16 FAM204CP-201ENST00000424489 642 ntBASIC3.66□□□□□ -1.82
RPRD1AQ96P16 VN1R42P-201ENST00000424651 344 ntBASIC3.66□□□□□ -1.82
RPRD1AQ96P16 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.66□□□□□ -1.82
RPRD1AQ96P16 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.66□□□□□ -1.82
RPRD1AQ96P16 ETF1P3-201ENST00000430422 1160 ntBASIC3.66□□□□□ -1.82
RPRD1AQ96P16 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.66□□□□□ -1.82
RPRD1AQ96P16 AL050321.1-201ENST00000432363 400 ntBASIC3.66□□□□□ -1.82
RPRD1AQ96P16 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.66□□□□□ -1.82
RPRD1AQ96P16 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.66□□□□□ -1.82
RPRD1AQ96P16 UBE2V1P5-201ENST00000440070 405 ntBASIC3.66□□□□□ -1.82
RPRD1AQ96P16 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.66□□□□□ -1.82
RPRD1AQ96P16 RPL21P23-201ENST00000446654 460 ntBASIC3.66□□□□□ -1.82
RPRD1AQ96P16 NPM1P49-201ENST00000448027 714 ntBASIC3.66□□□□□ -1.82
RPRD1AQ96P16 DNAJC19P8-201ENST00000452887 259 ntBASIC3.66□□□□□ -1.82
RPRD1AQ96P16 AL035407.2-201ENST00000454090 378 ntBASIC3.66□□□□□ -1.82
RPRD1AQ96P16 AC008280.2-201ENST00000455473 307 ntBASIC3.66□□□□□ -1.82
RPRD1AQ96P16 AC089999.1-201ENST00000460336 374 ntBASIC3.66□□□□□ -1.82
RPRD1AQ96P16 RPL23AP73-201ENST00000492507 471 ntBASIC3.66□□□□□ -1.82
RPRD1AQ96P16 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.66□□□□□ -1.82
RPRD1AQ96P16 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.66□□□□□ -1.82
RPRD1AQ96P16 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.66□□□□□ -1.82
RPRD1AQ96P16 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.66□□□□□ -1.82
RPRD1AQ96P16 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.66□□□□□ -1.82
RPRD1AQ96P16 HIGD1AP3-201ENST00000515857 278 ntBASIC3.66□□□□□ -1.82
RPRD1AQ96P16 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.66□□□□□ -1.82
RPRD1AQ96P16 AC103843.2-201ENST00000530523 682 ntBASIC3.66□□□□□ -1.82
RPRD1AQ96P16 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.66□□□□□ -1.82
RPRD1AQ96P16 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.66□□□□□ -1.82
RPRD1AQ96P16 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.66□□□□□ -1.82
RPRD1AQ96P16 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.66□□□□□ -1.82
RPRD1AQ96P16 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.66□□□□□ -1.82
RPRD1AQ96P16 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.66□□□□□ -1.82
RPRD1AQ96P16 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.66□□□□□ -1.82
RPRD1AQ96P16 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.66□□□□□ -1.82
RPRD1AQ96P16 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.66□□□□□ -1.82
RPRD1AQ96P16 LINC00557-201ENST00000563184 1279 ntBASIC3.66□□□□□ -1.82
RPRD1AQ96P16 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.66□□□□□ -1.82
RPRD1AQ96P16 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.66□□□□□ -1.82
RPRD1AQ96P16 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.66□□□□□ -1.82
RPRD1AQ96P16 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.66□□□□□ -1.82
RPRD1AQ96P16 AL392048.1-201ENST00000613946 534 ntBASIC3.66□□□□□ -1.82
RPRD1AQ96P16 AL357559.1-201ENST00000622228 274 ntBASIC3.66□□□□□ -1.82
RPRD1AQ96P16 AP003400.6-201ENST00000624698 740 ntBASIC3.66□□□□□ -1.82
RPRD1AQ96P16 MIR4496-201ENST00000635896 61 ntBASIC3.66□□□□□ -1.82
RPRD1AQ96P16 AL163152.1-201ENST00000642001 374 ntBASIC3.66□□□□□ -1.82
RPRD1AQ96P16 AC092326.2-201ENST00000624772 1561 ntBASIC3.66□□□□□ -1.82
RPRD1AQ96P16 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RPRD1AQ96P16 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.66□□□□□ -1.82
RPRD1AQ96P16 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
RPRD1AQ96P16 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RPRD1AQ96P16 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 151 ms