Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
C9orf72Q96LT7 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
C9orf72Q96LT7 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.5□□□□□ -1.85
C9orf72Q96LT7 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
C9orf72Q96LT7 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
C9orf72Q96LT7 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
C9orf72Q96LT7 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.49□□□□□ -1.85
C9orf72Q96LT7 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
C9orf72Q96LT7 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
C9orf72Q96LT7 RNA5SP72-201ENST00000364442 117 ntBASIC3.49□□□□□ -1.85
C9orf72Q96LT7 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
C9orf72Q96LT7 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
C9orf72Q96LT7 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
C9orf72Q96LT7 EI24P2-201ENST00000397776 1076 ntBASIC3.49□□□□□ -1.85
C9orf72Q96LT7 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
C9orf72Q96LT7 SKINT1L-201ENST00000401057 817 ntBASIC3.49□□□□□ -1.85
C9orf72Q96LT7 DNAJC19P6-201ENST00000401853 280 ntBASIC3.49□□□□□ -1.85
C9orf72Q96LT7 AC126124.2-201ENST00000413542 321 ntBASIC3.49□□□□□ -1.85
C9orf72Q96LT7 Z99755.1-201ENST00000414048 380 ntBASIC3.49□□□□□ -1.85
C9orf72Q96LT7 RFESDP1-201ENST00000422350 461 ntBASIC3.49□□□□□ -1.85
C9orf72Q96LT7 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.49□□□□□ -1.85
C9orf72Q96LT7 AL159987.2-201ENST00000432754 307 ntBASIC3.49□□□□□ -1.85
C9orf72Q96LT7 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
C9orf72Q96LT7 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.49□□□□□ -1.85
C9orf72Q96LT7 MTCYBP31-201ENST00000438855 1122 ntBASIC3.49□□□□□ -1.85
C9orf72Q96LT7 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.49□□□□□ -1.85
C9orf72Q96LT7 RPL23AP67-201ENST00000465341 474 ntBASIC3.49□□□□□ -1.85
C9orf72Q96LT7 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.49□□□□□ -1.85
C9orf72Q96LT7 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.49□□□□□ -1.85
C9orf72Q96LT7 ZNF192P1-203ENST00000565888 810 ntBASIC3.49□□□□□ -1.85
C9orf72Q96LT7 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.49□□□□□ -1.85
C9orf72Q96LT7 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.49□□□□□ -1.85
C9orf72Q96LT7 AC006116.10-201ENST00000591836 581 ntBASIC3.49□□□□□ -1.85
C9orf72Q96LT7 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.49□□□□□ -1.85
C9orf72Q96LT7 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.49□□□□□ -1.85
C9orf72Q96LT7 MIR7153-201ENST00000637758 57 ntBASIC3.49□□□□□ -1.85
C9orf72Q96LT7 AL365440.1-201ENST00000436135 2167 ntBASIC3.49□□□□□ -1.85
C9orf72Q96LT7 AC009501.3-201ENST00000605001 1352 ntBASIC3.49□□□□□ -1.85
C9orf72Q96LT7 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
C9orf72Q96LT7 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
C9orf72Q96LT7 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
C9orf72Q96LT7 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
C9orf72Q96LT7 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
C9orf72Q96LT7 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
C9orf72Q96LT7 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
C9orf72Q96LT7 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
C9orf72Q96LT7 Y_RNA.333-201ENST00000365274 102 ntBASIC3.48□□□□□ -1.85
C9orf72Q96LT7 RNU6-356P-201ENST00000384140 107 ntBASIC3.48□□□□□ -1.85
C9orf72Q96LT7 HMGB1P10-201ENST00000395823 563 ntBASIC3.48□□□□□ -1.85
C9orf72Q96LT7 SNORA11.1-201ENST00000408133 129 ntBASIC3.48□□□□□ -1.85
C9orf72Q96LT7 RPS7P15-201ENST00000415804 584 ntBASIC3.48□□□□□ -1.85
C9orf72Q96LT7 LINC01347-201ENST00000417964 355 ntBASIC3.48□□□□□ -1.85
C9orf72Q96LT7 GTF2IP23-201ENST00000423746 351 ntBASIC3.48□□□□□ -1.85
C9orf72Q96LT7 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.48□□□□□ -1.85
C9orf72Q96LT7 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.48□□□□□ -1.85
C9orf72Q96LT7 AC008264.1-201ENST00000447612 367 ntBASIC3.48□□□□□ -1.85
C9orf72Q96LT7 CYCSP35-201ENST00000451978 304 ntBASIC3.48□□□□□ -1.85
C9orf72Q96LT7 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.48□□□□□ -1.85
C9orf72Q96LT7 OR9N1P-202ENST00000494289 481 ntBASIC3.48□□□□□ -1.85
C9orf72Q96LT7 AL035404.1-201ENST00000497982 568 ntBASIC3.48□□□□□ -1.85
C9orf72Q96LT7 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.48□□□□□ -1.85
C9orf72Q96LT7 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.48□□□□□ -1.85
C9orf72Q96LT7 AC005921.1-201ENST00000510589 286 ntBASIC3.48□□□□□ -1.85
C9orf72Q96LT7 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.48□□□□□ -1.85
C9orf72Q96LT7 AC104027.1-201ENST00000521887 300 ntBASIC3.48□□□□□ -1.85
C9orf72Q96LT7 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.48□□□□□ -1.85
C9orf72Q96LT7 AC103843.2-201ENST00000530523 682 ntBASIC3.48□□□□□ -1.85
C9orf72Q96LT7 RN7SL339P-201ENST00000580597 296 ntBASIC3.48□□□□□ -1.85
C9orf72Q96LT7 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.48□□□□□ -1.85
C9orf72Q96LT7 AC011492.1-201ENST00000600023 315 ntBASIC3.48□□□□□ -1.85
C9orf72Q96LT7 ELOCP35-201ENST00000604289 336 ntBASIC3.48□□□□□ -1.85
C9orf72Q96LT7 AC012468.1-201ENST00000604888 430 ntBASIC3.48□□□□□ -1.85
C9orf72Q96LT7 AC007179.3-201ENST00000604976 235 ntBASIC3.48□□□□□ -1.85
C9orf72Q96LT7 AC018754.1-201ENST00000607486 925 ntBASIC3.48□□□□□ -1.85
C9orf72Q96LT7 AC112503.1-201ENST00000608436 391 ntBASIC3.48□□□□□ -1.85
C9orf72Q96LT7 MIR7851-201ENST00000610611 160 ntBASIC3.48□□□□□ -1.85
C9orf72Q96LT7 MIR7975-201ENST00000619350 68 ntBASIC3.48□□□□□ -1.85
C9orf72Q96LT7 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
C9orf72Q96LT7 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
C9orf72Q96LT7 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
C9orf72Q96LT7 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.48□□□□□ -1.85
C9orf72Q96LT7 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
C9orf72Q96LT7 AC138915.3-201ENST00000562908 1389 ntBASIC3.48□□□□□ -1.85
C9orf72Q96LT7 AL049781.1-201ENST00000623195 3585 ntBASIC3.48□□□□□ -1.85
C9orf72Q96LT7 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
C9orf72Q96LT7 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
C9orf72Q96LT7 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
C9orf72Q96LT7 AC091152.2-201ENST00000591628 2569 ntBASIC3.47□□□□□ -1.85
C9orf72Q96LT7 ZNF826P-207ENST00000622273 1910 ntBASIC3.47□□□□□ -1.85
C9orf72Q96LT7 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
C9orf72Q96LT7 AC234772.1-201ENST00000377927 937 ntBASIC3.47□□□□□ -1.85
C9orf72Q96LT7 HSPE1P26-201ENST00000405341 275 ntBASIC3.47□□□□□ -1.85
C9orf72Q96LT7 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.47□□□□□ -1.85
C9orf72Q96LT7 NUP35P2-201ENST00000416748 943 ntBASIC3.47□□□□□ -1.85
C9orf72Q96LT7 AIMP1P1-201ENST00000418670 937 ntBASIC3.47□□□□□ -1.85
C9orf72Q96LT7 RPS15AP40-201ENST00000419621 391 ntBASIC3.47□□□□□ -1.85
C9orf72Q96LT7 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.47□□□□□ -1.85
C9orf72Q96LT7 AC097499.1-201ENST00000444277 208 ntBASIC3.47□□□□□ -1.85
C9orf72Q96LT7 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.47□□□□□ -1.85
C9orf72Q96LT7 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms