Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AL596327.1-201ENST00000603629 213 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 AC128687.1-201ENST00000605304 619 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 AC026368.1-201ENST00000614934 690 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 MIR6780A-201ENST00000615089 68 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.58□□□□□ -1.68
VPS50Q96JG6 RNU6-156P-201ENST00000621869 107 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 AP000843.1-201ENST00000624880 701 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.58□□□□□ -1.68
VPS50Q96JG6 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
VPS50Q96JG6 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.58□□□□□ -1.68
VPS50Q96JG6 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VPS50Q96JG6 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
VPS50Q96JG6 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
VPS50Q96JG6 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS50Q96JG6 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
VPS50Q96JG6 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS50Q96JG6 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS50Q96JG6 EOGT-210ENST00000615922 1931 ntBASIC4.57□□□□□ -1.68
VPS50Q96JG6 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS50Q96JG6 RNU6-921P-201ENST00000384361 107 ntBASIC4.57□□□□□ -1.68
VPS50Q96JG6 MIR506-201ENST00000384998 124 ntBASIC4.57□□□□□ -1.68
VPS50Q96JG6 MIR93-201ENST00000385024 80 ntBASIC4.57□□□□□ -1.68
VPS50Q96JG6 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
VPS50Q96JG6 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS50Q96JG6 MTCO1P21-201ENST00000416634 589 ntBASIC4.57□□□□□ -1.68
VPS50Q96JG6 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS50Q96JG6 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.57□□□□□ -1.68
VPS50Q96JG6 SDCBPP2-201ENST00000424643 885 ntBASIC4.57□□□□□ -1.68
VPS50Q96JG6 AL031736.2-201ENST00000426573 787 ntBASIC4.57□□□□□ -1.68
VPS50Q96JG6 AC073335.1-201ENST00000427776 363 ntBASIC4.57□□□□□ -1.68
VPS50Q96JG6 BMS1P19-201ENST00000433925 393 ntBASIC4.57□□□□□ -1.68
VPS50Q96JG6 AC093414.1-201ENST00000434712 514 ntBASIC4.57□□□□□ -1.68
VPS50Q96JG6 AC016831.4-201ENST00000438302 307 ntBASIC4.57□□□□□ -1.68
VPS50Q96JG6 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.57□□□□□ -1.68
VPS50Q96JG6 UBE2V1P3-201ENST00000439651 417 ntBASIC4.57□□□□□ -1.68
VPS50Q96JG6 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.57□□□□□ -1.68
VPS50Q96JG6 AC108463.1-201ENST00000450258 347 ntBASIC4.57□□□□□ -1.68
VPS50Q96JG6 NDUFS5P3-201ENST00000450668 321 ntBASIC4.57□□□□□ -1.68
VPS50Q96JG6 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.57□□□□□ -1.68
VPS50Q96JG6 NDUFA12P1-201ENST00000455914 406 ntBASIC4.57□□□□□ -1.68
VPS50Q96JG6 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.57□□□□□ -1.68
VPS50Q96JG6 CEACAMP10-202ENST00000495431 496 ntBASIC4.57□□□□□ -1.68
VPS50Q96JG6 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.57□□□□□ -1.68
VPS50Q96JG6 RN7SKP276-201ENST00000516242 268 ntBASIC4.57□□□□□ -1.68
VPS50Q96JG6 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.57□□□□□ -1.68
VPS50Q96JG6 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS50Q96JG6 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.57□□□□□ -1.68
VPS50Q96JG6 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.57□□□□□ -1.68
VPS50Q96JG6 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.57□□□□□ -1.68
VPS50Q96JG6 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.57□□□□□ -1.68
VPS50Q96JG6 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS50Q96JG6 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS50Q96JG6 AC074051.3-201ENST00000570238 358 ntBASIC4.57□□□□□ -1.68
VPS50Q96JG6 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.57□□□□□ -1.68
VPS50Q96JG6 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS50Q96JG6 MIR3611-201ENST00000584484 83 ntBASIC4.57□□□□□ -1.68
VPS50Q96JG6 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS50Q96JG6 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.57□□□□□ -1.68
VPS50Q96JG6 AC068790.6-201ENST00000602558 258 ntBASIC4.57□□□□□ -1.68
VPS50Q96JG6 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS50Q96JG6 AC018816.2-201ENST00000621460 353 ntBASIC4.57□□□□□ -1.68
VPS50Q96JG6 AC231657.1-201ENST00000624313 397 ntBASIC4.57□□□□□ -1.68
VPS50Q96JG6 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS50Q96JG6 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS50Q96JG6 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS50Q96JG6 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS50Q96JG6 AC007529.1-201ENST00000418574 2178 ntBASIC4.57□□□□□ -1.68
VPS50Q96JG6 PABPC1P9-201ENST00000426076 1612 ntBASIC4.57□□□□□ -1.68
VPS50Q96JG6 SAGE2P-201ENST00000420011 2126 ntBASIC4.57□□□□□ -1.68
VPS50Q96JG6 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS50Q96JG6 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS50Q96JG6 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.56□□□□□ -1.68
VPS50Q96JG6 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS50Q96JG6 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS50Q96JG6 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.56□□□□□ -1.68
VPS50Q96JG6 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VPS50Q96JG6 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
VPS50Q96JG6 AL121657.1-201ENST00000327215 531 ntBASIC4.56□□□□□ -1.68
VPS50Q96JG6 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VPS50Q96JG6 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VPS50Q96JG6 AL080315.1-201ENST00000406055 466 ntBASIC4.56□□□□□ -1.68
VPS50Q96JG6 PGBD4P8-201ENST00000412993 562 ntBASIC4.56□□□□□ -1.68
VPS50Q96JG6 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.56□□□□□ -1.68
VPS50Q96JG6 MTCO3P41-201ENST00000414801 328 ntBASIC4.56□□□□□ -1.68
VPS50Q96JG6 AC092647.1-201ENST00000420654 287 ntBASIC4.56□□□□□ -1.68
VPS50Q96JG6 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.56□□□□□ -1.68
VPS50Q96JG6 AL953862.1-201ENST00000423016 168 ntBASIC4.56□□□□□ -1.68
VPS50Q96JG6 NIPA2P1-201ENST00000426223 976 ntBASIC4.56□□□□□ -1.68
VPS50Q96JG6 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.56□□□□□ -1.68
VPS50Q96JG6 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.56□□□□□ -1.68
VPS50Q96JG6 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VPS50Q96JG6 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.56□□□□□ -1.68
VPS50Q96JG6 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS50Q96JG6 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.56□□□□□ -1.68
VPS50Q96JG6 AC073264.2-201ENST00000448886 166 ntBASIC4.56□□□□□ -1.68
VPS50Q96JG6 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.56□□□□□ -1.68
VPS50Q96JG6 RNU6-956P-201ENST00000458868 103 ntBASIC4.56□□□□□ -1.68
VPS50Q96JG6 AC092757.1-201ENST00000467293 467 ntBASIC4.56□□□□□ -1.68
VPS50Q96JG6 AC090013.1-201ENST00000485147 480 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms