Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 UQCRHP4-201ENST00000471686 272 ntBASIC4.02□□□□□ -1.77
VMP1Q96GC9 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC4.02□□□□□ -1.77
VMP1Q96GC9 AC025554.1-201ENST00000505641 188 ntBASIC4.02□□□□□ -1.77
VMP1Q96GC9 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.02□□□□□ -1.77
VMP1Q96GC9 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.02□□□□□ -1.77
VMP1Q96GC9 AC109458.1-201ENST00000508858 316 ntBASIC4.02□□□□□ -1.77
VMP1Q96GC9 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
VMP1Q96GC9 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VMP1Q96GC9 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VMP1Q96GC9 AC108064.1-201ENST00000513791 460 ntBASIC4.02□□□□□ -1.77
VMP1Q96GC9 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VMP1Q96GC9 SNORA48.10-201ENST00000516965 160 ntBASIC4.02□□□□□ -1.77
VMP1Q96GC9 OR4P1P-201ENST00000530808 1136 ntBASIC4.02□□□□□ -1.77
VMP1Q96GC9 TRAV8-5-201ENST00000537369 341 ntBASIC4.02□□□□□ -1.77
VMP1Q96GC9 AC090502.2-201ENST00000549267 280 ntBASIC4.02□□□□□ -1.77
VMP1Q96GC9 AC126177.3-201ENST00000551839 688 ntBASIC4.02□□□□□ -1.77
VMP1Q96GC9 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.02□□□□□ -1.77
VMP1Q96GC9 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.02□□□□□ -1.77
VMP1Q96GC9 AC122134.1-202ENST00000569111 1201 ntBASIC4.02□□□□□ -1.77
VMP1Q96GC9 MIR3939-201ENST00000582614 106 ntBASIC4.02□□□□□ -1.77
VMP1Q96GC9 MIR4697-201ENST00000582977 78 ntBASIC4.02□□□□□ -1.77
VMP1Q96GC9 MIR3138-201ENST00000585238 82 ntBASIC4.02□□□□□ -1.77
VMP1Q96GC9 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.02□□□□□ -1.77
VMP1Q96GC9 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.02□□□□□ -1.77
VMP1Q96GC9 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.02□□□□□ -1.77
VMP1Q96GC9 AL034351.1-201ENST00000605288 668 ntBASIC4.02□□□□□ -1.77
VMP1Q96GC9 AC124016.2-201ENST00000610058 665 ntBASIC4.02□□□□□ -1.77
VMP1Q96GC9 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VMP1Q96GC9 MIR6798-201ENST00000612887 67 ntBASIC4.02□□□□□ -1.77
VMP1Q96GC9 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.02□□□□□ -1.77
VMP1Q96GC9 AC109454.4-201ENST00000623411 649 ntBASIC4.02□□□□□ -1.77
VMP1Q96GC9 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.02□□□□□ -1.77
VMP1Q96GC9 AC087821.2-201ENST00000637086 450 ntBASIC4.02□□□□□ -1.77
VMP1Q96GC9 AC002546.1-201ENST00000588041 2504 ntBASIC4.02□□□□□ -1.77
VMP1Q96GC9 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
VMP1Q96GC9 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VMP1Q96GC9 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
VMP1Q96GC9 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VMP1Q96GC9 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
VMP1Q96GC9 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
VMP1Q96GC9 PRO1804-201ENST00000623780 2050 ntBASIC4.01□□□□□ -1.77
VMP1Q96GC9 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
VMP1Q96GC9 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.01□□□□□ -1.77
VMP1Q96GC9 MIR423-201ENST00000362201 94 ntBASIC4.01□□□□□ -1.77
VMP1Q96GC9 RNU1-132P-201ENST00000364300 164 ntBASIC4.01□□□□□ -1.77
VMP1Q96GC9 AC068538.1-201ENST00000376856 336 ntBASIC4.01□□□□□ -1.77
VMP1Q96GC9 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.01□□□□□ -1.77
VMP1Q96GC9 RNU6-712P-201ENST00000410558 100 ntBASIC4.01□□□□□ -1.77
VMP1Q96GC9 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.01□□□□□ -1.77
VMP1Q96GC9 HMGN2P20-201ENST00000437531 273 ntBASIC4.01□□□□□ -1.77
VMP1Q96GC9 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.01□□□□□ -1.77
VMP1Q96GC9 COX6CP18-201ENST00000448769 222 ntBASIC4.01□□□□□ -1.77
VMP1Q96GC9 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.01□□□□□ -1.77
VMP1Q96GC9 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4.01□□□□□ -1.77
VMP1Q96GC9 ABCF2P2-201ENST00000450549 296 ntBASIC4.01□□□□□ -1.77
VMP1Q96GC9 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.01□□□□□ -1.77
VMP1Q96GC9 AC010618.1-201ENST00000469924 477 ntBASIC4.01□□□□□ -1.77
VMP1Q96GC9 AC013828.1-201ENST00000481845 158 ntBASIC4.01□□□□□ -1.77
VMP1Q96GC9 AC091167.1-201ENST00000492017 396 ntBASIC4.01□□□□□ -1.77
VMP1Q96GC9 KLRA1P-201ENST00000503499 986 ntBASIC4.01□□□□□ -1.77
VMP1Q96GC9 AC008837.1-201ENST00000511513 412 ntBASIC4.01□□□□□ -1.77
VMP1Q96GC9 RNU1-61P-201ENST00000516107 151 ntBASIC4.01□□□□□ -1.77
VMP1Q96GC9 MTND1P36-201ENST00000522384 936 ntBASIC4.01□□□□□ -1.77
VMP1Q96GC9 OR4A12P-201ENST00000530847 918 ntBASIC4.01□□□□□ -1.77
VMP1Q96GC9 AC092747.2-201ENST00000545069 983 ntBASIC4.01□□□□□ -1.77
VMP1Q96GC9 AC008127.2-201ENST00000549925 1075 ntBASIC4.01□□□□□ -1.77
VMP1Q96GC9 PARP1P2-201ENST00000556806 195 ntBASIC4.01□□□□□ -1.77
VMP1Q96GC9 AL354984.3-201ENST00000604803 325 ntBASIC4.01□□□□□ -1.77
VMP1Q96GC9 ARF4P1-201ENST00000605447 541 ntBASIC4.01□□□□□ -1.77
VMP1Q96GC9 AP002802.2-201ENST00000605877 235 ntBASIC4.01□□□□□ -1.77
VMP1Q96GC9 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.01□□□□□ -1.77
VMP1Q96GC9 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.01□□□□□ -1.77
VMP1Q96GC9 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
VMP1Q96GC9 MIR3653-201ENST00000625572 110 ntBASIC4.01□□□□□ -1.77
VMP1Q96GC9 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
VMP1Q96GC9 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VMP1Q96GC9 AC021755.1-201ENST00000559747 1447 ntBASIC4.01□□□□□ -1.77
VMP1Q96GC9 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
VMP1Q96GC9 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
VMP1Q96GC9 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VMP1Q96GC9 AL645568.2-201ENST00000432815 1337 ntBASIC4□□□□□ -1.77
VMP1Q96GC9 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
VMP1Q96GC9 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VMP1Q96GC9 MIR383-201ENST00000362257 73 ntBASIC4□□□□□ -1.77
VMP1Q96GC9 CRP-202ENST00000368110 667 ntTSL 3 BASIC4□□□□□ -1.77
VMP1Q96GC9 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4□□□□□ -1.77
VMP1Q96GC9 RNU6-1300P-201ENST00000391046 108 ntBASIC4□□□□□ -1.77
VMP1Q96GC9 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4□□□□□ -1.77
VMP1Q96GC9 MIR1911-201ENST00000410783 80 ntBASIC4□□□□□ -1.77
VMP1Q96GC9 AC069282.1-201ENST00000411911 526 ntBASIC4□□□□□ -1.77
VMP1Q96GC9 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4□□□□□ -1.77
VMP1Q96GC9 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4□□□□□ -1.77
VMP1Q96GC9 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4□□□□□ -1.77
VMP1Q96GC9 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4□□□□□ -1.77
VMP1Q96GC9 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4□□□□□ -1.77
VMP1Q96GC9 AL157831.1-201ENST00000426134 473 ntBASIC4□□□□□ -1.77
VMP1Q96GC9 RAC1P8-201ENST00000427086 527 ntBASIC4□□□□□ -1.77
VMP1Q96GC9 RPEP2-201ENST00000432149 701 ntBASIC4□□□□□ -1.77
VMP1Q96GC9 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4□□□□□ -1.77
VMP1Q96GC9 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms