Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC005005.4-201ENST00000623789 16698 ntBASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 OR11H5P-202ENST00000641612 1325 ntBASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 Z95327.2-201ENST00000414579 1873 ntBASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 RPL23AP57-201ENST00000332361 466 ntBASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 Y_RNA.97-201ENST00000363094 102 ntBASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 RNU6-1293P-201ENST00000384077 107 ntBASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 RNU5A-6P-201ENST00000384136 116 ntBASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 RNU6-146P-201ENST00000384602 108 ntBASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 ARF4P3-201ENST00000397387 509 ntBASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 AC140479.3-201ENST00000418944 1126 ntBASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 FABP7P1-201ENST00000424004 391 ntBASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 AC016831.4-201ENST00000438302 307 ntBASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 RPL36AP15-201ENST00000444514 266 ntBASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 H2AFZP5-201ENST00000446960 382 ntBASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 AL591473.1-201ENST00000464297 313 ntBASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 AC090142.1-201ENST00000465776 462 ntBASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 AC090453.1-201ENST00000495560 436 ntBASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 RPL37P25-201ENST00000507308 276 ntBASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 AC063949.1-201ENST00000552900 865 ntBASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 RN7SL652P-201ENST00000577769 300 ntBASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 MIR544B-201ENST00000582372 78 ntBASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 IMMP1LP1-201ENST00000605170 488 ntBASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 AC109347.2-201ENST00000610220 349 ntBASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 MIR6853-201ENST00000619642 74 ntBASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 RNU6-156P-201ENST00000621869 107 ntBASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 CRYM-AS1-204ENST00000637983 556 ntBASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 SALL4P2-201ENST00000423288 2910 ntBASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.38□□□□□ -1.71
CTHRC1Q96CG8 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 Y_RNA.41-201ENST00000362646 102 ntBASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 RNU6-289P-201ENST00000364093 107 ntBASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 RNU6-259P-201ENST00000383999 107 ntBASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 AC016769.3-201ENST00000396562 315 ntBASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 AL031679.1-201ENST00000400616 525 ntBASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 SSXP10-201ENST00000402595 565 ntBASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 RN7SKP267-201ENST00000410381 285 ntBASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 HMGB3P23-201ENST00000414981 585 ntBASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 AIMP1P1-201ENST00000418670 937 ntBASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 Z97055.1-201ENST00000419730 712 ntBASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 COX6CP17-201ENST00000421389 185 ntBASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 AL356583.2-201ENST00000426536 280 ntBASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 AC104651.1-201ENST00000427559 735 ntBASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 RPS26P2-201ENST00000440331 348 ntBASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 MTND5P14-201ENST00000441481 1267 ntBASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 AL513533.1-201ENST00000453728 415 ntBASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 snoU13.7-201ENST00000459220 104 ntBASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 RNA5SP103-201ENST00000459503 118 ntBASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 PABPC1P3-201ENST00000469174 459 ntBASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 TMED11P-201ENST00000479478 690 ntBASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 AC007686.1-201ENST00000488511 463 ntBASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 RPL36AP41-201ENST00000493820 306 ntBASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 MTND2P33-201ENST00000506452 1031 ntBASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 MTND4LP26-201ENST00000518144 282 ntBASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 AC022861.1-201ENST00000522981 663 ntBASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 AP002748.2-201ENST00000528671 348 ntBASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 AC016957.1-201ENST00000534895 309 ntBASIC4.37□□□□□ -1.71
CTHRC1Q96CG8 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms