Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.33□□□□□ -1.56
ERCC4Q92889 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.33□□□□□ -1.56
ERCC4Q92889 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.33□□□□□ -1.56
ERCC4Q92889 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ERCC4Q92889 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
ERCC4Q92889 RNA5SP305-201ENST00000362665 119 ntBASIC5.33□□□□□ -1.56
ERCC4Q92889 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC5.33□□□□□ -1.56
ERCC4Q92889 HMGN1P14-201ENST00000412459 517 ntBASIC5.33□□□□□ -1.56
ERCC4Q92889 GSTM3P2-201ENST00000412746 530 ntBASIC5.33□□□□□ -1.56
ERCC4Q92889 AC016769.2-201ENST00000414815 475 ntBASIC5.33□□□□□ -1.56
ERCC4Q92889 OFD1P18Y-201ENST00000420889 959 ntBASIC5.33□□□□□ -1.56
ERCC4Q92889 ISCA1P1-201ENST00000426679 387 ntBASIC5.33□□□□□ -1.56
ERCC4Q92889 PPIAP13-201ENST00000434706 478 ntBASIC5.33□□□□□ -1.56
ERCC4Q92889 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.33□□□□□ -1.56
ERCC4Q92889 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.33□□□□□ -1.56
ERCC4Q92889 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.33□□□□□ -1.56
ERCC4Q92889 AL022238.1-201ENST00000442557 355 ntBASIC5.33□□□□□ -1.56
ERCC4Q92889 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.33□□□□□ -1.56
ERCC4Q92889 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.33□□□□□ -1.56
ERCC4Q92889 RPL7AP6-201ENST00000477943 801 ntBASIC5.33□□□□□ -1.56
ERCC4Q92889 TMED11P-201ENST00000479478 690 ntBASIC5.33□□□□□ -1.56
ERCC4Q92889 AC013828.1-201ENST00000481845 158 ntBASIC5.33□□□□□ -1.56
ERCC4Q92889 AC004453.1-201ENST00000487895 408 ntBASIC5.33□□□□□ -1.56
ERCC4Q92889 RPL32P9-201ENST00000487963 407 ntBASIC5.33□□□□□ -1.56
ERCC4Q92889 OR4G11P-201ENST00000492842 939 ntBASIC5.33□□□□□ -1.56
ERCC4Q92889 AC140172.1-201ENST00000502928 141 ntBASIC5.33□□□□□ -1.56
ERCC4Q92889 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ERCC4Q92889 AC091868.1-201ENST00000508746 304 ntBASIC5.33□□□□□ -1.56
ERCC4Q92889 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC5.33□□□□□ -1.56
ERCC4Q92889 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC5.33□□□□□ -1.56
ERCC4Q92889 RNU6-506P-201ENST00000516553 94 ntBASIC5.33□□□□□ -1.56
ERCC4Q92889 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.33□□□□□ -1.56
ERCC4Q92889 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC5.33□□□□□ -1.56
ERCC4Q92889 AP002748.2-201ENST00000528671 348 ntBASIC5.33□□□□□ -1.56
ERCC4Q92889 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC5.33□□□□□ -1.56
ERCC4Q92889 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.33□□□□□ -1.56
ERCC4Q92889 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.33□□□□□ -1.56
ERCC4Q92889 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC5.33□□□□□ -1.56
ERCC4Q92889 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC5.33□□□□□ -1.56
ERCC4Q92889 AL022154.1-201ENST00000604698 785 ntBASIC5.33□□□□□ -1.56
ERCC4Q92889 AL353662.3-201ENST00000625131 237 ntBASIC5.33□□□□□ -1.56
ERCC4Q92889 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.33□□□□□ -1.56
ERCC4Q92889 AC009229.4-201ENST00000623854 1947 ntBASIC5.33□□□□□ -1.56
ERCC4Q92889 AC095050.2-201ENST00000510748 1458 ntBASIC5.32□□□□□ -1.56
ERCC4Q92889 AC004520.1-201ENST00000608362 1413 ntBASIC5.32□□□□□ -1.56
ERCC4Q92889 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ERCC4Q92889 GDI2P1-201ENST00000429312 1336 ntBASIC5.32□□□□□ -1.56
ERCC4Q92889 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.32□□□□□ -1.56
ERCC4Q92889 Y_RNA.88-201ENST00000363029 99 ntBASIC5.32□□□□□ -1.56
ERCC4Q92889 SNORA58B-201ENST00000364259 136 ntBASIC5.32□□□□□ -1.56
ERCC4Q92889 RNU5E-5P-201ENST00000365379 116 ntBASIC5.32□□□□□ -1.56
ERCC4Q92889 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
ERCC4Q92889 RNY3P14-201ENST00000384309 102 ntBASIC5.32□□□□□ -1.56
ERCC4Q92889 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
ERCC4Q92889 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ERCC4Q92889 VN1R8P-201ENST00000407739 893 ntBASIC5.32□□□□□ -1.56
ERCC4Q92889 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.32□□□□□ -1.56
ERCC4Q92889 AC083875.1-201ENST00000419509 405 ntBASIC5.32□□□□□ -1.56
ERCC4Q92889 OR2AM1P-201ENST00000422137 422 ntBASIC5.32□□□□□ -1.56
ERCC4Q92889 AC073850.1-201ENST00000449243 255 ntBASIC5.32□□□□□ -1.56
ERCC4Q92889 AC098824.1-201ENST00000453565 980 ntBASIC5.32□□□□□ -1.56
ERCC4Q92889 RN7SL610P-201ENST00000463845 291 ntBASIC5.32□□□□□ -1.56
ERCC4Q92889 AC097493.1-201ENST00000463958 372 ntBASIC5.32□□□□□ -1.56
ERCC4Q92889 MTCO3P38-201ENST00000468910 766 ntBASIC5.32□□□□□ -1.56
ERCC4Q92889 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.32□□□□□ -1.56
ERCC4Q92889 AC105252.1-201ENST00000503089 286 ntBASIC5.32□□□□□ -1.56
ERCC4Q92889 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.32□□□□□ -1.56
ERCC4Q92889 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5.32□□□□□ -1.56
ERCC4Q92889 RNU6-488P-201ENST00000515918 99 ntBASIC5.32□□□□□ -1.56
ERCC4Q92889 RNU6-202P-201ENST00000515998 96 ntBASIC5.32□□□□□ -1.56
ERCC4Q92889 RN7SKP66-201ENST00000516681 231 ntBASIC5.32□□□□□ -1.56
ERCC4Q92889 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.32□□□□□ -1.56
ERCC4Q92889 AP002453.2-201ENST00000533503 320 ntBASIC5.32□□□□□ -1.56
ERCC4Q92889 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC5.32□□□□□ -1.56
ERCC4Q92889 RPL21P7-201ENST00000557463 483 ntBASIC5.32□□□□□ -1.56
ERCC4Q92889 HMGB3P26-201ENST00000560051 582 ntBASIC5.32□□□□□ -1.56
ERCC4Q92889 MIR5699-201ENST00000578903 90 ntBASIC5.32□□□□□ -1.56
ERCC4Q92889 AC087763.1-201ENST00000603391 286 ntBASIC5.32□□□□□ -1.56
ERCC4Q92889 AC112187.2-201ENST00000604345 283 ntBASIC5.32□□□□□ -1.56
ERCC4Q92889 COX6CP4-201ENST00000605798 228 ntBASIC5.32□□□□□ -1.56
ERCC4Q92889 AC116447.1-201ENST00000613153 453 ntBASIC5.32□□□□□ -1.56
ERCC4Q92889 uc_338.18-201ENST00000615451 175 ntBASIC5.32□□□□□ -1.56
ERCC4Q92889 AC027807.2-201ENST00000616099 408 ntBASIC5.32□□□□□ -1.56
ERCC4Q92889 AC231657.1-201ENST00000624313 397 ntBASIC5.32□□□□□ -1.56
ERCC4Q92889 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.32□□□□□ -1.56
ERCC4Q92889 AC092162.3-201ENST00000624511 1624 ntBASIC5.32□□□□□ -1.56
ERCC4Q92889 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ERCC4Q92889 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ERCC4Q92889 AC018529.3-201ENST00000624212 2254 ntBASIC5.32□□□□□ -1.56
ERCC4Q92889 SMG1P6-201ENST00000532337 2930 ntBASIC5.32□□□□□ -1.56
ERCC4Q92889 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.32□□□□□ -1.56
ERCC4Q92889 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ERCC4Q92889 IRF5P1-201ENST00000504852 2164 ntBASIC5.32□□□□□ -1.56
ERCC4Q92889 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.32□□□□□ -1.56
ERCC4Q92889 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ERCC4Q92889 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ERCC4Q92889 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
ERCC4Q92889 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
ERCC4Q92889 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ERCC4Q92889 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms