Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.48□□□□□ -1.69
HMGB4Q8WW32 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
HMGB4Q8WW32 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.48□□□□□ -1.69
HMGB4Q8WW32 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HMGB4Q8WW32 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 AL592437.2-201ENST00000421655 2434 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HMGB4Q8WW32 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
HMGB4Q8WW32 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HMGB4Q8WW32 ELL2P3-201ENST00000457883 1602 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 SPRR2C-201ENST00000290702 219 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
HMGB4Q8WW32 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HMGB4Q8WW32 AL359837.1-201ENST00000381357 287 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 SNORD116-9-201ENST00000384000 95 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 SNORD116-3-201ENST00000384287 95 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 SNORD116-7-201ENST00000384404 95 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 SNORD116-5-201ENST00000384462 95 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 AC016769.3-201ENST00000396562 315 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 HMGB1P17-201ENST00000403495 628 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 AL024474.1-201ENST00000404655 591 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 MIR1271-201ENST00000408537 86 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 RNU6-628P-201ENST00000410675 107 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 RPL31P2-201ENST00000413849 377 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 CEACAMP8-201ENST00000413902 580 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 RPL23AP39-201ENST00000415533 405 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 OR6C64P-201ENST00000419708 825 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 BMS1P19-201ENST00000433925 393 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.47□□□□□ -1.69
HMGB4Q8WW32 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.47□□□□□ -1.69
HMGB4Q8WW32 AC104651.2-201ENST00000447549 528 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 AL359073.1-201ENST00000448036 403 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 RPL7P31-201ENST00000450192 724 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 BX276092.4-201ENST00000452056 248 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 AC073387.1-201ENST00000453261 709 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.47□□□□□ -1.69
HMGB4Q8WW32 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.47□□□□□ -1.69
HMGB4Q8WW32 AL136126.1-201ENST00000473603 402 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 AC072039.1-201ENST00000477611 581 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 AC092045.1-201ENST00000495716 1231 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 RN7SKP277-201ENST00000516895 283 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HMGB4Q8WW32 TVP23BP1-201ENST00000557500 617 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 HSPE1P3-201ENST00000559254 309 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 AL133457.1-201ENST00000564251 987 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.47□□□□□ -1.69
HMGB4Q8WW32 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.47□□□□□ -1.69
HMGB4Q8WW32 DPRXP4-201ENST00000578053 568 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 WISP1-OT1-201ENST00000602893 642 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 OR2AS2P-201ENST00000606902 342 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.47□□□□□ -1.69
HMGB4Q8WW32 SNX18P1Y-201ENST00000616231 511 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.47□□□□□ -1.69
HMGB4Q8WW32 RNA5SP196-201ENST00000625967 102 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HMGB4Q8WW32 AC140479.6-201ENST00000633535 357 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HMGB4Q8WW32 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.47□□□□□ -1.69
HMGB4Q8WW32 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HMGB4Q8WW32 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HMGB4Q8WW32 AL672167.1-203ENST00000641299 2975 ntBASIC4.47□□□□□ -1.69
HMGB4Q8WW32 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.46□□□□□ -1.69
HMGB4Q8WW32 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.46□□□□□ -1.69
HMGB4Q8WW32 AL158163.1-201ENST00000603915 1649 ntBASIC4.46□□□□□ -1.69
HMGB4Q8WW32 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.46□□□□□ -1.69
HMGB4Q8WW32 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
HMGB4Q8WW32 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.46□□□□□ -1.69
HMGB4Q8WW32 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HMGB4Q8WW32 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMGB4Q8WW32 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.46□□□□□ -1.7
HMGB4Q8WW32 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.46□□□□□ -1.7
HMGB4Q8WW32 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
HMGB4Q8WW32 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.46□□□□□ -1.7
HMGB4Q8WW32 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMGB4Q8WW32 RPL21P132-201ENST00000331267 462 ntBASIC4.46□□□□□ -1.7
HMGB4Q8WW32 Y_RNA.302-201ENST00000364997 102 ntBASIC4.46□□□□□ -1.7
HMGB4Q8WW32 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.46□□□□□ -1.7
HMGB4Q8WW32 RNU6-920P-201ENST00000410926 92 ntBASIC4.46□□□□□ -1.7
HMGB4Q8WW32 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.46□□□□□ -1.7
HMGB4Q8WW32 CKS1BP6-201ENST00000424932 240 ntBASIC4.46□□□□□ -1.7
HMGB4Q8WW32 AL132765.1-201ENST00000434165 553 ntBASIC4.46□□□□□ -1.7
HMGB4Q8WW32 TMX2P1-201ENST00000436507 708 ntBASIC4.46□□□□□ -1.7
HMGB4Q8WW32 RPL23AP52-201ENST00000439311 478 ntBASIC4.46□□□□□ -1.7
HMGB4Q8WW32 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.46□□□□□ -1.7
HMGB4Q8WW32 ARPC3P2-201ENST00000457786 533 ntBASIC4.46□□□□□ -1.7
HMGB4Q8WW32 AC026410.2-201ENST00000460281 156 ntBASIC4.46□□□□□ -1.7
HMGB4Q8WW32 SETP11-201ENST00000473027 690 ntBASIC4.46□□□□□ -1.7
HMGB4Q8WW32 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.46□□□□□ -1.7
HMGB4Q8WW32 RPS6P4-201ENST00000494693 758 ntBASIC4.46□□□□□ -1.7
HMGB4Q8WW32 AC108941.1-201ENST00000502853 530 ntBASIC4.46□□□□□ -1.7
HMGB4Q8WW32 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.46□□□□□ -1.7
HMGB4Q8WW32 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.46□□□□□ -1.7
HMGB4Q8WW32 MTCYBP43-201ENST00000513621 740 ntBASIC4.46□□□□□ -1.7
HMGB4Q8WW32 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.46□□□□□ -1.7
HMGB4Q8WW32 AC008802.1-201ENST00000519121 791 ntBASIC4.46□□□□□ -1.7
HMGB4Q8WW32 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.46□□□□□ -1.7
HMGB4Q8WW32 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMGB4Q8WW32 TRAV8-5-201ENST00000537369 341 ntBASIC4.46□□□□□ -1.7
HMGB4Q8WW32 OR8R1P-201ENST00000543943 764 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms