Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 YWHAZP8-201ENST00000436935 731 ntBASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 UBE2V1P5-201ENST00000440070 405 ntBASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 DNAJC19P8-201ENST00000452887 259 ntBASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 snoU13.7-201ENST00000459220 104 ntBASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 PRELID3BP5-201ENST00000508612 460 ntBASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 SNORA70.19-201ENST00000516717 90 ntBASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 RN7SKP234-201ENST00000517173 224 ntBASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 AC010306.1-201ENST00000523223 1117 ntBASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 AC084824.1-201ENST00000550917 1005 ntBASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 AL442163.2-201ENST00000553912 710 ntBASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 AC027104.1-201ENST00000563702 681 ntBASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 AL671309.1-201ENST00000603750 544 ntBASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 MIR6864-201ENST00000617935 70 ntBASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 FRG1HP-204ENST00000617940 757 ntBASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 AC073569.3-201ENST00000619055 682 ntBASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 AC068831.8-201ENST00000620171 435 ntBASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 AL357559.1-201ENST00000622228 274 ntBASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
CCDC50Q8IVM0 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CCDC50Q8IVM0 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CCDC50Q8IVM0 MIR148B-201ENST00000362252 99 ntBASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 RNU2-37P-201ENST00000410695 177 ntBASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 RPL31P45-201ENST00000419532 356 ntBASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 AL353718.1-201ENST00000451028 517 ntBASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 HMGN1P18-201ENST00000457642 277 ntBASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 RN7SL283P-201ENST00000489055 303 ntBASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 AC078817.1-201ENST00000492623 435 ntBASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 SETP14-201ENST00000497538 873 ntBASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 RN7SKP21-201ENST00000516503 220 ntBASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 OSBPL9P3-201ENST00000534523 595 ntBASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 AC104229.1-201ENST00000561364 255 ntBASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 AC024941.1-201ENST00000612250 334 ntBASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 AL445493.3-201ENST00000619568 477 ntBASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 AC000367.1-201ENST00000452711 1766 ntBASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 AL592494.2-201ENST00000425455 1548 ntBASIC3.65□□□□□ -1.83
CCDC50Q8IVM0 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC50Q8IVM0 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
CCDC50Q8IVM0 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC50Q8IVM0 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC50Q8IVM0 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC50Q8IVM0 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CCDC50Q8IVM0 MIR1193-201ENST00000408109 78 ntBASIC3.64□□□□□ -1.83
CCDC50Q8IVM0 ATP5A1P2-201ENST00000412323 255 ntBASIC3.64□□□□□ -1.83
CCDC50Q8IVM0 NDUFB4P5-201ENST00000415445 361 ntBASIC3.64□□□□□ -1.83
CCDC50Q8IVM0 RPS15AP40-201ENST00000419621 391 ntBASIC3.64□□□□□ -1.83
CCDC50Q8IVM0 AL035423.1-201ENST00000420331 213 ntBASIC3.64□□□□□ -1.83
CCDC50Q8IVM0 AC012498.1-201ENST00000424037 437 ntBASIC3.64□□□□□ -1.83
CCDC50Q8IVM0 AC008065.1-201ENST00000428525 348 ntBASIC3.64□□□□□ -1.83
CCDC50Q8IVM0 ETF1P3-201ENST00000430422 1160 ntBASIC3.64□□□□□ -1.83
CCDC50Q8IVM0 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC50Q8IVM0 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC50Q8IVM0 AC004865.1-201ENST00000442276 1003 ntBASIC3.64□□□□□ -1.83
CCDC50Q8IVM0 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC50Q8IVM0 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.64□□□□□ -1.83
CCDC50Q8IVM0 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC50Q8IVM0 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC50Q8IVM0 AL035407.2-201ENST00000454090 378 ntBASIC3.64□□□□□ -1.83
CCDC50Q8IVM0 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC50Q8IVM0 RPL23AP67-201ENST00000465341 474 ntBASIC3.64□□□□□ -1.83
CCDC50Q8IVM0 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms