Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 MTCYBP16-201ENST00000509187 1129 ntBASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 USP9YP5-201ENST00000511770 630 ntBASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 KCTD9P2-201ENST00000512203 1013 ntBASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 AC139495.1-202ENST00000513164 354 ntBASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 AC087808.1-201ENST00000520501 361 ntBASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 TRAV8-5-201ENST00000537369 341 ntBASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 AL109766.1-201ENST00000555080 552 ntBASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 AC023813.2-201ENST00000564321 469 ntBASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 AP001269.3-201ENST00000588718 329 ntBASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 IPO5P1-202ENST00000600039 287 ntBASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 AL390838.2-201ENST00000602394 274 ntBASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 AC103881.1-201ENST00000603476 538 ntBASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 MTND3P19-201ENST00000603825 345 ntBASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 AL354984.3-201ENST00000604803 325 ntBASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 AL590282.1-201ENST00000610379 1136 ntBASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 FAM27D1-201ENST00000612308 341 ntBASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 AL354976.1-201ENST00000613843 387 ntBASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 AC098679.5-201ENST00000624394 571 ntBASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 AC008993.2-201ENST00000631744 806 ntBASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NUP54Q7Z3B4 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 RNU1-14P-201ENST00000362759 152 ntBASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 RNU6-492P-201ENST00000363035 104 ntBASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 RNU6-339P-201ENST00000384310 107 ntBASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 Y_RNA.493-201ENST00000384422 102 ntBASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 SNORD66.1-201ENST00000391230 76 ntBASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 RN7SKP235-201ENST00000410662 305 ntBASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 NRBF2P2-201ENST00000413087 861 ntBASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 AL136133.1-201ENST00000413694 376 ntBASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 CHIAP3-201ENST00000423668 1133 ntBASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 GTF2IP23-201ENST00000423746 351 ntBASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 RPL7P44-201ENST00000424827 742 ntBASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 AC017083.1-201ENST00000428093 483 ntBASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 CR769776.1-201ENST00000441254 787 ntBASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 OFD1P3Y-201ENST00000453312 783 ntBASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 AC091167.1-201ENST00000492017 396 ntBASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 RPL23AP55-201ENST00000498163 452 ntBASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 AC025445.1-201ENST00000502728 300 ntBASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 OR5H5P-201ENST00000503164 928 ntBASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 AC092593.2-201ENST00000513866 913 ntBASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 RNA5SP49-201ENST00000516450 115 ntBASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 RNU6-1073P-201ENST00000517182 106 ntBASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 IGKV2D-19-201ENST00000523346 262 ntBASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 AP001189.2-201ENST00000527320 189 ntBASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 AC006064.5-201ENST00000541782 248 ntBASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 AC090695.1-201ENST00000561269 1222 ntBASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 AADACP1-206ENST00000561502 1193 ntBASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 AC005412.1-201ENST00000580812 1049 ntBASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 MIR3138-201ENST00000585238 82 ntBASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 BNIP3P38-201ENST00000601117 544 ntBASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 MIR432-201ENST00000606207 94 ntBASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 AC007546.1-201ENST00000619452 559 ntBASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 AC092184.1-201ENST00000625042 715 ntBASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 MIR3653-201ENST00000625572 110 ntBASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 AC117529.2-201ENST00000512159 2068 ntBASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NUP54Q7Z3B4 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms