Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC027309.2-201ENST00000520566 192 ntBASIC5.82□□□□□ -1.48
RNF43Q68DV7 AC022634.1-201ENST00000520765 532 ntBASIC5.82□□□□□ -1.48
RNF43Q68DV7 AP001804.2-201ENST00000533932 910 ntBASIC5.82□□□□□ -1.48
RNF43Q68DV7 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.82□□□□□ -1.48
RNF43Q68DV7 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.82□□□□□ -1.48
RNF43Q68DV7 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RNF43Q68DV7 AP000654.2-201ENST00000605633 586 ntBASIC5.82□□□□□ -1.48
RNF43Q68DV7 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC5.82□□□□□ -1.48
RNF43Q68DV7 AC090607.5-201ENST00000615692 224 ntBASIC5.82□□□□□ -1.48
RNF43Q68DV7 AC090510.2-201ENST00000617465 629 ntBASIC5.82□□□□□ -1.48
RNF43Q68DV7 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
RNF43Q68DV7 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.82□□□□□ -1.48
RNF43Q68DV7 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.82□□□□□ -1.48
RNF43Q68DV7 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RNF43Q68DV7 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RNF43Q68DV7 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RNF43Q68DV7 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RNF43Q68DV7 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.82□□□□□ -1.48
RNF43Q68DV7 NUP58P1-201ENST00000502546 1738 ntBASIC5.82□□□□□ -1.48
RNF43Q68DV7 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.82□□□□□ -1.48
RNF43Q68DV7 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RNF43Q68DV7 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RNF43Q68DV7 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RNF43Q68DV7 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.82□□□□□ -1.48
RNF43Q68DV7 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.82□□□□□ -1.48
RNF43Q68DV7 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.81□□□□□ -1.48
RNF43Q68DV7 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.81□□□□□ -1.48
RNF43Q68DV7 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
RNF43Q68DV7 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.81□□□□□ -1.48
RNF43Q68DV7 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC5.81□□□□□ -1.48
RNF43Q68DV7 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
RNF43Q68DV7 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RNF43Q68DV7 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RNF43Q68DV7 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.81□□□□□ -1.48
RNF43Q68DV7 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
RNF43Q68DV7 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RNF43Q68DV7 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.81□□□□□ -1.48
RNF43Q68DV7 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.81□□□□□ -1.48
RNF43Q68DV7 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
RNF43Q68DV7 AC009804.1-201ENST00000400949 179 ntBASIC5.81□□□□□ -1.48
RNF43Q68DV7 AL592114.1-201ENST00000403842 483 ntBASIC5.81□□□□□ -1.48
RNF43Q68DV7 RNU2-9P-201ENST00000410194 145 ntBASIC5.81□□□□□ -1.48
RNF43Q68DV7 AC073264.1-201ENST00000411508 416 ntBASIC5.81□□□□□ -1.48
RNF43Q68DV7 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.81□□□□□ -1.48
RNF43Q68DV7 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.81□□□□□ -1.48
RNF43Q68DV7 AL451054.2-201ENST00000420896 202 ntBASIC5.81□□□□□ -1.48
RNF43Q68DV7 DUTP6-201ENST00000425573 462 ntBASIC5.81□□□□□ -1.48
RNF43Q68DV7 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.81□□□□□ -1.48
RNF43Q68DV7 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.81□□□□□ -1.48
RNF43Q68DV7 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.81□□□□□ -1.48
RNF43Q68DV7 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.81□□□□□ -1.48
RNF43Q68DV7 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.81□□□□□ -1.48
RNF43Q68DV7 AL390119.1-201ENST00000440329 312 ntBASIC5.81□□□□□ -1.48
RNF43Q68DV7 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.81□□□□□ -1.48
RNF43Q68DV7 RPL32P28-201ENST00000443577 397 ntBASIC5.81□□□□□ -1.48
RNF43Q68DV7 GAPDHP14-201ENST00000450472 937 ntBASIC5.81□□□□□ -1.48
RNF43Q68DV7 AC083899.1-201ENST00000454465 3819 ntBASIC5.81□□□□□ -1.48
RNF43Q68DV7 BTF3P15-201ENST00000455606 336 ntBASIC5.81□□□□□ -1.48
RNF43Q68DV7 U8.20-201ENST00000459445 131 ntBASIC5.81□□□□□ -1.48
RNF43Q68DV7 MTATP8P1-201ENST00000467115 207 ntBASIC5.81□□□□□ -1.48
RNF43Q68DV7 AC100832.1-201ENST00000471945 383 ntBASIC5.81□□□□□ -1.48
RNF43Q68DV7 AC233702.1-201ENST00000482905 502 ntBASIC5.81□□□□□ -1.48
RNF43Q68DV7 RPL38P4-201ENST00000502376 214 ntBASIC5.81□□□□□ -1.48
RNF43Q68DV7 AC010587.1-201ENST00000505809 469 ntBASIC5.81□□□□□ -1.48
RNF43Q68DV7 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.81□□□□□ -1.48
RNF43Q68DV7 AC006499.2-201ENST00000513470 337 ntBASIC5.81□□□□□ -1.48
RNF43Q68DV7 IGHV3-63-201ENST00000518422 341 ntBASIC5.81□□□□□ -1.48
RNF43Q68DV7 SUB1P1-201ENST00000524415 382 ntBASIC5.81□□□□□ -1.48
RNF43Q68DV7 COPS8P3-201ENST00000526024 482 ntBASIC5.81□□□□□ -1.48
RNF43Q68DV7 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC5.81□□□□□ -1.48
RNF43Q68DV7 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.81□□□□□ -1.48
RNF43Q68DV7 AL163153.1-201ENST00000554223 283 ntBASIC5.81□□□□□ -1.48
RNF43Q68DV7 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.81□□□□□ -1.48
RNF43Q68DV7 AC010653.1-201ENST00000571108 881 ntBASIC5.81□□□□□ -1.48
RNF43Q68DV7 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.81□□□□□ -1.48
RNF43Q68DV7 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.81□□□□□ -1.48
RNF43Q68DV7 AC007938.3-201ENST00000604965 623 ntBASIC5.81□□□□□ -1.48
RNF43Q68DV7 Z84480.1-201ENST00000605131 311 ntBASIC5.81□□□□□ -1.48
RNF43Q68DV7 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.81□□□□□ -1.48
RNF43Q68DV7 MIR6820-201ENST00000611508 62 ntBASIC5.81□□□□□ -1.48
RNF43Q68DV7 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
RNF43Q68DV7 MIR8080-201ENST00000622224 89 ntBASIC5.81□□□□□ -1.48
RNF43Q68DV7 AC138965.3-201ENST00000623875 498 ntBASIC5.81□□□□□ -1.48
RNF43Q68DV7 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.81□□□□□ -1.48
RNF43Q68DV7 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RNF43Q68DV7 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.81□□□□□ -1.48
RNF43Q68DV7 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
RNF43Q68DV7 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RNF43Q68DV7 CCT8P1-201ENST00000413611 1657 ntBASIC5.81□□□□□ -1.48
RNF43Q68DV7 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.81□□□□□ -1.48
RNF43Q68DV7 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
RNF43Q68DV7 AC010266.2-201ENST00000564741 3255 ntBASIC5.8□□□□□ -1.48
RNF43Q68DV7 ERCC6-202ENST00000374127 1782 ntBASIC5.8□□□□□ -1.48
RNF43Q68DV7 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RNF43Q68DV7 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RNF43Q68DV7 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.8□□□□□ -1.48
RNF43Q68DV7 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.8□□□□□ -1.48
RNF43Q68DV7 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.8□□□□□ -1.48
RNF43Q68DV7 OR11H5P-202ENST00000641612 1325 ntBASIC5.8□□□□□ -1.48
RNF43Q68DV7 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms