Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 MIR6758-201ENST00000620653 63 ntBASIC2.87□□□□□ -1.95
CCDC58Q4VC31 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC58Q4VC31 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC58Q4VC31 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC58Q4VC31 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CCDC58Q4VC31 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CCDC58Q4VC31 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC58Q4VC31 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
CCDC58Q4VC31 RNU1-70P-201ENST00000362618 164 ntBASIC2.86□□□□□ -1.95
CCDC58Q4VC31 VTRNA1-1-201ENST00000363120 99 ntBASIC2.86□□□□□ -1.95
CCDC58Q4VC31 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CCDC58Q4VC31 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
CCDC58Q4VC31 MIR181B1-201ENST00000385240 110 ntBASIC2.86□□□□□ -1.95
CCDC58Q4VC31 SNORD17-201ENST00000390930 237 ntBASIC2.86□□□□□ -1.95
CCDC58Q4VC31 RPL21P17-201ENST00000397467 475 ntBASIC2.86□□□□□ -1.95
CCDC58Q4VC31 ATG3P1-201ENST00000419507 911 ntBASIC2.86□□□□□ -1.95
CCDC58Q4VC31 AL356806.1-201ENST00000422524 916 ntBASIC2.86□□□□□ -1.95
CCDC58Q4VC31 RPL7P2-201ENST00000427639 268 ntBASIC2.86□□□□□ -1.95
CCDC58Q4VC31 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC58Q4VC31 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
CCDC58Q4VC31 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC58Q4VC31 GSTA11P-201ENST00000452866 669 ntBASIC2.86□□□□□ -1.95
CCDC58Q4VC31 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC58Q4VC31 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.86□□□□□ -1.95
CCDC58Q4VC31 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CCDC58Q4VC31 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC58Q4VC31 HSPE1P20-201ENST00000538133 289 ntBASIC2.86□□□□□ -1.95
CCDC58Q4VC31 ARL6IP1P1-201ENST00000545836 610 ntBASIC2.86□□□□□ -1.95
CCDC58Q4VC31 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.86□□□□□ -1.95
CCDC58Q4VC31 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC58Q4VC31 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
CCDC58Q4VC31 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC58Q4VC31 AC022884.3-201ENST00000579571 248 ntBASIC2.86□□□□□ -1.95
CCDC58Q4VC31 AC073387.2-201ENST00000604797 784 ntBASIC2.86□□□□□ -1.95
CCDC58Q4VC31 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC58Q4VC31 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
CCDC58Q4VC31 DPY19L2P2-203ENST00000435536 1858 ntBASIC2.86□□□□□ -1.95
CCDC58Q4VC31 AC073055.1-201ENST00000456901 1621 ntBASIC2.86□□□□□ -1.95
CCDC58Q4VC31 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.85□□□□□ -1.95
CCDC58Q4VC31 MIR937-201ENST00000401271 86 ntBASIC2.85□□□□□ -1.95
CCDC58Q4VC31 AC245054.2-201ENST00000415639 319 ntBASIC2.85□□□□□ -1.95
CCDC58Q4VC31 MTCYBP7-201ENST00000419540 1134 ntBASIC2.85□□□□□ -1.95
CCDC58Q4VC31 USP9YP36-201ENST00000424581 829 ntBASIC2.85□□□□□ -1.95
CCDC58Q4VC31 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.85□□□□□ -1.95
CCDC58Q4VC31 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.85□□□□□ -1.95
CCDC58Q4VC31 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC58Q4VC31 RPL29P29-201ENST00000448725 423 ntBASIC2.85□□□□□ -1.95
CCDC58Q4VC31 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC58Q4VC31 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC58Q4VC31 AC104472.2-201ENST00000469035 601 ntBASIC2.85□□□□□ -1.95
CCDC58Q4VC31 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC58Q4VC31 MTCO2P32-201ENST00000514865 403 ntBASIC2.85□□□□□ -1.95
CCDC58Q4VC31 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC58Q4VC31 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC58Q4VC31 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC58Q4VC31 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC2.85□□□□□ -1.95
CCDC58Q4VC31 AF230666.2-201ENST00000602328 725 ntBASIC2.85□□□□□ -1.95
CCDC58Q4VC31 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC2.85□□□□□ -1.95
CCDC58Q4VC31 AP000676.4-201ENST00000624659 623 ntBASIC2.85□□□□□ -1.95
CCDC58Q4VC31 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.85□□□□□ -1.95
CCDC58Q4VC31 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC58Q4VC31 AL161431.1-201ENST00000618966 4205 ntBASIC2.85□□□□□ -1.95
CCDC58Q4VC31 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC58Q4VC31 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.85□□□□□ -1.95
CCDC58Q4VC31 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC2.85□□□□□ -1.95
CCDC58Q4VC31 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC58Q4VC31 AC116096.1-201ENST00000566804 2314 ntBASIC2.85□□□□□ -1.95
CCDC58Q4VC31 MAPK10-322ENST00000641485 4530 ntBASIC2.84□□□□□ -1.95
CCDC58Q4VC31 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CCDC58Q4VC31 AC108206.1-201ENST00000570186 4159 ntBASIC2.84□□□□□ -1.95
CCDC58Q4VC31 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
CCDC58Q4VC31 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
CCDC58Q4VC31 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CCDC58Q4VC31 AC068538.1-201ENST00000376856 336 ntBASIC2.84□□□□□ -1.95
CCDC58Q4VC31 RPS3AP26-201ENST00000398259 784 ntBASIC2.84□□□□□ -1.95
CCDC58Q4VC31 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC58Q4VC31 MTND4P11-201ENST00000417020 1058 ntBASIC2.84□□□□□ -1.95
CCDC58Q4VC31 AL807761.1-201ENST00000417622 171 ntBASIC2.84□□□□□ -1.95
CCDC58Q4VC31 AC092641.1-201ENST00000440229 772 ntBASIC2.84□□□□□ -1.95
CCDC58Q4VC31 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC58Q4VC31 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC58Q4VC31 ELOCP23-201ENST00000452014 332 ntBASIC2.84□□□□□ -1.95
CCDC58Q4VC31 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC2.84□□□□□ -1.95
CCDC58Q4VC31 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC58Q4VC31 MTCYBP37-201ENST00000510642 1133 ntBASIC2.84□□□□□ -1.95
CCDC58Q4VC31 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CCDC58Q4VC31 RN7SKP13-201ENST00000515933 244 ntBASIC2.84□□□□□ -1.95
CCDC58Q4VC31 RN7SKP43-201ENST00000516173 320 ntBASIC2.84□□□□□ -1.95
CCDC58Q4VC31 OR4A45P-201ENST00000529954 901 ntBASIC2.84□□□□□ -1.95
CCDC58Q4VC31 AC090695.1-201ENST00000561269 1222 ntBASIC2.84□□□□□ -1.95
CCDC58Q4VC31 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC2.84□□□□□ -1.95
CCDC58Q4VC31 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.84□□□□□ -1.95
CCDC58Q4VC31 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC2.84□□□□□ -1.95
CCDC58Q4VC31 SNRPGP15-201ENST00000600149 222 ntBASIC2.84□□□□□ -1.95
CCDC58Q4VC31 DUXAP4-201ENST00000603046 613 ntBASIC2.84□□□□□ -1.95
CCDC58Q4VC31 AP000787.2-201ENST00000604432 568 ntBASIC2.84□□□□□ -1.95
CCDC58Q4VC31 HMGN2P28-201ENST00000606102 262 ntBASIC2.84□□□□□ -1.95
CCDC58Q4VC31 AC091046.2-201ENST00000620775 665 ntBASIC2.84□□□□□ -1.95
CCDC58Q4VC31 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC58Q4VC31 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms