Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.46□□□□□ -1.69
PTCH1Q13635 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
PTCH1Q13635 MIR622-201ENST00000638396 96 ntBASIC4.46□□□□□ -1.69
PTCH1Q13635 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
PTCH1Q13635 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.46□□□□□ -1.69
PTCH1Q13635 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.46□□□□□ -1.7
PTCH1Q13635 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
PTCH1Q13635 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
PTCH1Q13635 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
PTCH1Q13635 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PTCH1Q13635 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
PTCH1Q13635 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.46□□□□□ -1.7
PTCH1Q13635 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
PTCH1Q13635 AL365361.1-201ENST00000566942 3481 ntBASIC4.46□□□□□ -1.7
PTCH1Q13635 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.46□□□□□ -1.7
PTCH1Q13635 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PTCH1Q13635 RNU6-152P-201ENST00000384037 107 ntBASIC4.46□□□□□ -1.7
PTCH1Q13635 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.46□□□□□ -1.7
PTCH1Q13635 NPM1P24-201ENST00000428039 894 ntBASIC4.46□□□□□ -1.7
PTCH1Q13635 AC000041.1-201ENST00000439655 175 ntBASIC4.46□□□□□ -1.7
PTCH1Q13635 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.46□□□□□ -1.7
PTCH1Q13635 IFNWP4-201ENST00000453148 294 ntBASIC4.46□□□□□ -1.7
PTCH1Q13635 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.46□□□□□ -1.7
PTCH1Q13635 AF186190.1-201ENST00000517470 480 ntBASIC4.46□□□□□ -1.7
PTCH1Q13635 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PTCH1Q13635 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.46□□□□□ -1.7
PTCH1Q13635 AC015849.2-201ENST00000605738 409 ntBASIC4.46□□□□□ -1.7
PTCH1Q13635 AC009318.3-201ENST00000616916 503 ntBASIC4.46□□□□□ -1.7
PTCH1Q13635 AC139769.3-201ENST00000618383 175 ntBASIC4.46□□□□□ -1.7
PTCH1Q13635 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.46□□□□□ -1.7
PTCH1Q13635 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC4.46□□□□□ -1.7
PTCH1Q13635 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PTCH1Q13635 MTCO1P8-201ENST00000416914 1523 ntBASIC4.45□□□□□ -1.7
PTCH1Q13635 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PTCH1Q13635 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.45□□□□□ -1.7
PTCH1Q13635 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
PTCH1Q13635 AC096656.1-201ENST00000623826 1364 ntBASIC4.45□□□□□ -1.7
PTCH1Q13635 RNU6-244P-201ENST00000391028 104 ntBASIC4.45□□□□□ -1.7
PTCH1Q13635 RPL30P2-201ENST00000414021 291 ntBASIC4.45□□□□□ -1.7
PTCH1Q13635 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PTCH1Q13635 AC073069.1-201ENST00000428657 441 ntBASIC4.45□□□□□ -1.7
PTCH1Q13635 FGF7P3-201ENST00000454645 303 ntBASIC4.45□□□□□ -1.7
PTCH1Q13635 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.45□□□□□ -1.7
PTCH1Q13635 AC068724.1-201ENST00000487100 792 ntBASIC4.45□□□□□ -1.7
PTCH1Q13635 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.45□□□□□ -1.7
PTCH1Q13635 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.45□□□□□ -1.7
PTCH1Q13635 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.45□□□□□ -1.7
PTCH1Q13635 AC073111.2-201ENST00000605657 1075 ntBASIC4.45□□□□□ -1.7
PTCH1Q13635 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.45□□□□□ -1.7
PTCH1Q13635 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.45□□□□□ -1.7
PTCH1Q13635 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.45□□□□□ -1.7
PTCH1Q13635 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTCH1Q13635 AL645568.2-201ENST00000432815 1337 ntBASIC4.44□□□□□ -1.7
PTCH1Q13635 NEAT1-202ENST00000501122 22743 ntBASIC4.44□□□□□ -1.7
PTCH1Q13635 AL031985.3-201ENST00000565390 2449 ntBASIC4.44□□□□□ -1.7
PTCH1Q13635 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTCH1Q13635 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
PTCH1Q13635 AL136360.1-201ENST00000503377 1900 ntBASIC4.44□□□□□ -1.7
PTCH1Q13635 AC073325.2-201ENST00000339545 159 ntBASIC4.44□□□□□ -1.7
PTCH1Q13635 RNU4-82P-201ENST00000362443 140 ntBASIC4.44□□□□□ -1.7
PTCH1Q13635 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.44□□□□□ -1.7
PTCH1Q13635 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.44□□□□□ -1.7
PTCH1Q13635 AL035407.1-201ENST00000429211 571 ntBASIC4.44□□□□□ -1.7
PTCH1Q13635 KRTAP19-11P-201ENST00000439851 104 ntBASIC4.44□□□□□ -1.7
PTCH1Q13635 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC4.44□□□□□ -1.7
PTCH1Q13635 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.44□□□□□ -1.7
PTCH1Q13635 AC245517.2-201ENST00000442890 346 ntBASIC4.44□□□□□ -1.7
PTCH1Q13635 RPS6P2-201ENST00000454208 705 ntBASIC4.44□□□□□ -1.7
PTCH1Q13635 AC021205.2-201ENST00000480069 347 ntBASIC4.44□□□□□ -1.7
PTCH1Q13635 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.44□□□□□ -1.7
PTCH1Q13635 RN7SKP116-201ENST00000516902 319 ntBASIC4.44□□□□□ -1.7
PTCH1Q13635 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.44□□□□□ -1.7
PTCH1Q13635 HMGB3P26-201ENST00000560051 582 ntBASIC4.44□□□□□ -1.7
PTCH1Q13635 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC4.44□□□□□ -1.7
PTCH1Q13635 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.44□□□□□ -1.7
PTCH1Q13635 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.44□□□□□ -1.7
PTCH1Q13635 AC017076.1-201ENST00000607613 578 ntBASIC4.44□□□□□ -1.7
PTCH1Q13635 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.44□□□□□ -1.7
PTCH1Q13635 AC011472.4-201ENST00000615848 491 ntBASIC4.44□□□□□ -1.7
PTCH1Q13635 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
PTCH1Q13635 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
PTCH1Q13635 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTCH1Q13635 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.44□□□□□ -1.7
PTCH1Q13635 AL049555.1-201ENST00000562834 1933 ntBASIC4.43□□□□□ -1.7
PTCH1Q13635 AL672296.1-201ENST00000427780 2158 ntBASIC4.43□□□□□ -1.7
PTCH1Q13635 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.43□□□□□ -1.7
PTCH1Q13635 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTCH1Q13635 RN7SKP220-201ENST00000410611 288 ntBASIC4.43□□□□□ -1.7
PTCH1Q13635 RHEBP3-201ENST00000411920 351 ntBASIC4.43□□□□□ -1.7
PTCH1Q13635 AL512504.1-201ENST00000415494 778 ntBASIC4.43□□□□□ -1.7
PTCH1Q13635 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.43□□□□□ -1.7
PTCH1Q13635 AL135938.1-201ENST00000443141 297 ntBASIC4.43□□□□□ -1.7
PTCH1Q13635 RN7SL432P-201ENST00000484057 298 ntBASIC4.43□□□□□ -1.7
PTCH1Q13635 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.43□□□□□ -1.7
PTCH1Q13635 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.43□□□□□ -1.7
PTCH1Q13635 ARL2BPP6-201ENST00000512757 439 ntBASIC4.43□□□□□ -1.7
PTCH1Q13635 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.43□□□□□ -1.7
PTCH1Q13635 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.43□□□□□ -1.7
PTCH1Q13635 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.43□□□□□ -1.7
PTCH1Q13635 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms