Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
YBX1P67809 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
YBX1P67809 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
YBX1P67809 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
YBX1P67809 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
YBX1P67809 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
YBX1P67809 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.2□□□□□ -1.58
YBX1P67809 AC092681.1-201ENST00000297369 291 ntBASIC5.2□□□□□ -1.58
YBX1P67809 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
YBX1P67809 NACAP2-201ENST00000318548 624 ntBASIC5.2□□□□□ -1.58
YBX1P67809 AC005294.1-201ENST00000355509 281 ntBASIC5.2□□□□□ -1.58
YBX1P67809 Y_RNA.46-201ENST00000362695 102 ntBASIC5.2□□□□□ -1.58
YBX1P67809 RNU6-1120P-201ENST00000362988 108 ntBASIC5.2□□□□□ -1.58
YBX1P67809 MIR559-201ENST00000385188 96 ntBASIC5.2□□□□□ -1.58
YBX1P67809 RNU6-510P-201ENST00000391239 108 ntBASIC5.2□□□□□ -1.58
YBX1P67809 AC009804.1-201ENST00000400949 179 ntBASIC5.2□□□□□ -1.58
YBX1P67809 RPL7P25-201ENST00000404151 721 ntBASIC5.2□□□□□ -1.58
YBX1P67809 AL356967.1-201ENST00000406305 431 ntBASIC5.2□□□□□ -1.58
YBX1P67809 MIR548P-201ENST00000408336 84 ntBASIC5.2□□□□□ -1.58
YBX1P67809 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.2□□□□□ -1.58
YBX1P67809 AP000534.2-201ENST00000412729 568 ntBASIC5.2□□□□□ -1.58
YBX1P67809 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.2□□□□□ -1.58
YBX1P67809 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.2□□□□□ -1.58
YBX1P67809 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.2□□□□□ -1.58
YBX1P67809 AC073136.2-201ENST00000417282 849 ntBASIC5.2□□□□□ -1.58
YBX1P67809 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.2□□□□□ -1.58
YBX1P67809 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.2□□□□□ -1.58
YBX1P67809 AC073069.1-201ENST00000428657 441 ntBASIC5.2□□□□□ -1.58
YBX1P67809 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.2□□□□□ -1.58
YBX1P67809 RPL7L1P9-201ENST00000431298 745 ntBASIC5.2□□□□□ -1.58
YBX1P67809 RSU1P2-202ENST00000437884 485 ntBASIC5.2□□□□□ -1.58
YBX1P67809 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.2□□□□□ -1.58
YBX1P67809 RPS27AP17-201ENST00000463344 455 ntBASIC5.2□□□□□ -1.58
YBX1P67809 AC092754.1-201ENST00000472975 479 ntBASIC5.2□□□□□ -1.58
YBX1P67809 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.2□□□□□ -1.58
YBX1P67809 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.2□□□□□ -1.58
YBX1P67809 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.2□□□□□ -1.58
YBX1P67809 AC112206.3-201ENST00000514578 389 ntBASIC5.2□□□□□ -1.58
YBX1P67809 RNU6-941P-201ENST00000516346 108 ntBASIC5.2□□□□□ -1.58
YBX1P67809 SCARNA16.4-201ENST00000516956 187 ntBASIC5.2□□□□□ -1.58
YBX1P67809 RNA5SP373-201ENST00000517271 95 ntBASIC5.2□□□□□ -1.58
YBX1P67809 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC5.2□□□□□ -1.58
YBX1P67809 AC022616.6-201ENST00000520479 119 ntBASIC5.2□□□□□ -1.58
YBX1P67809 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.2□□□□□ -1.58
YBX1P67809 AC022861.1-201ENST00000522981 663 ntBASIC5.2□□□□□ -1.58
YBX1P67809 OR5M2P-201ENST00000529003 936 ntBASIC5.2□□□□□ -1.58
YBX1P67809 OR5B19P-201ENST00000531766 928 ntBASIC5.2□□□□□ -1.58
YBX1P67809 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
YBX1P67809 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.2□□□□□ -1.58
YBX1P67809 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC5.2□□□□□ -1.58
YBX1P67809 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.2□□□□□ -1.58
YBX1P67809 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.2□□□□□ -1.58
YBX1P67809 AC006116.10-201ENST00000591836 581 ntBASIC5.2□□□□□ -1.58
YBX1P67809 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.2□□□□□ -1.58
YBX1P67809 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.2□□□□□ -1.58
YBX1P67809 AC011468.4-201ENST00000603942 409 ntBASIC5.2□□□□□ -1.58
YBX1P67809 AC004853.1-201ENST00000604902 698 ntBASIC5.2□□□□□ -1.58
YBX1P67809 AC078899.5-201ENST00000612475 178 ntBASIC5.2□□□□□ -1.58
YBX1P67809 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.2□□□□□ -1.58
YBX1P67809 AC009161.2-201ENST00000624626 138 ntBASIC5.2□□□□□ -1.58
YBX1P67809 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
YBX1P67809 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
YBX1P67809 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.2□□□□□ -1.58
YBX1P67809 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
YBX1P67809 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
YBX1P67809 AC004817.4-201ENST00000602396 3625 ntBASIC5.19□□□□□ -1.58
YBX1P67809 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
YBX1P67809 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
YBX1P67809 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
YBX1P67809 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
YBX1P67809 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
YBX1P67809 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
YBX1P67809 Y_RNA.128-201ENST00000363391 112 ntBASIC5.19□□□□□ -1.58
YBX1P67809 Y_RNA.315-201ENST00000365117 102 ntBASIC5.19□□□□□ -1.58
YBX1P67809 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.19□□□□□ -1.58
YBX1P67809 RNU6-317P-201ENST00000384031 107 ntBASIC5.19□□□□□ -1.58
YBX1P67809 Y_RNA.474-201ENST00000384341 102 ntBASIC5.19□□□□□ -1.58
YBX1P67809 RNU6-171P-201ENST00000384354 107 ntBASIC5.19□□□□□ -1.58
YBX1P67809 SNORA70-201ENST00000384436 135 ntBASIC5.19□□□□□ -1.58
YBX1P67809 RNU6-1160P-201ENST00000384546 104 ntBASIC5.19□□□□□ -1.58
YBX1P67809 RPL32P23-201ENST00000397237 405 ntBASIC5.19□□□□□ -1.58
YBX1P67809 DBIP1-201ENST00000401435 260 ntBASIC5.19□□□□□ -1.58
YBX1P67809 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.19□□□□□ -1.58
YBX1P67809 AC009161.1-201ENST00000417306 376 ntBASIC5.19□□□□□ -1.58
YBX1P67809 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC5.19□□□□□ -1.58
YBX1P67809 AC233981.1-201ENST00000423224 461 ntBASIC5.19□□□□□ -1.58
YBX1P67809 RPS3AP54-201ENST00000435535 734 ntBASIC5.19□□□□□ -1.58
YBX1P67809 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.19□□□□□ -1.58
YBX1P67809 AC016691.1-201ENST00000441321 413 ntBASIC5.19□□□□□ -1.58
YBX1P67809 H2AFZP6-201ENST00000444403 394 ntBASIC5.19□□□□□ -1.58
YBX1P67809 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.19□□□□□ -1.58
YBX1P67809 HIGD1AP8-201ENST00000453927 274 ntBASIC5.19□□□□□ -1.58
YBX1P67809 FGF7P3-201ENST00000454645 303 ntBASIC5.19□□□□□ -1.58
YBX1P67809 RPL7P15-201ENST00000461190 712 ntBASIC5.19□□□□□ -1.58
YBX1P67809 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC5.19□□□□□ -1.58
YBX1P67809 RPL23AP12-201ENST00000467573 473 ntBASIC5.19□□□□□ -1.58
YBX1P67809 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.19□□□□□ -1.58
YBX1P67809 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.19□□□□□ -1.58
YBX1P67809 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.19□□□□□ -1.58
YBX1P67809 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms