Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
RPS4XP62701 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
RPS4XP62701 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.55□□□□□ -1.84
RPS4XP62701 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.55□□□□□ -1.84
RPS4XP62701 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RPS4XP62701 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RPS4XP62701 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.55□□□□□ -1.84
RPS4XP62701 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.55□□□□□ -1.84
RPS4XP62701 RNA5SP322-201ENST00000363617 119 ntBASIC3.55□□□□□ -1.84
RPS4XP62701 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RPS4XP62701 MIR23A-201ENST00000385245 73 ntBASIC3.55□□□□□ -1.84
RPS4XP62701 MIR670-201ENST00000390142 98 ntBASIC3.55□□□□□ -1.84
RPS4XP62701 RPL23AP48-201ENST00000406913 488 ntBASIC3.55□□□□□ -1.84
RPS4XP62701 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.55□□□□□ -1.84
RPS4XP62701 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.55□□□□□ -1.84
RPS4XP62701 FCF1P2-201ENST00000415284 583 ntBASIC3.55□□□□□ -1.84
RPS4XP62701 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.55□□□□□ -1.84
RPS4XP62701 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.55□□□□□ -1.84
RPS4XP62701 RRM2P4-201ENST00000441721 562 ntBASIC3.55□□□□□ -1.84
RPS4XP62701 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.55□□□□□ -1.84
RPS4XP62701 AL590399.6-201ENST00000446396 307 ntBASIC3.55□□□□□ -1.84
RPS4XP62701 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.55□□□□□ -1.84
RPS4XP62701 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.55□□□□□ -1.84
RPS4XP62701 NDUFA5P7-201ENST00000452914 242 ntBASIC3.55□□□□□ -1.84
RPS4XP62701 AC034236.1-201ENST00000469891 373 ntBASIC3.55□□□□□ -1.84
RPS4XP62701 AC079203.1-201ENST00000487972 404 ntBASIC3.55□□□□□ -1.84
RPS4XP62701 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.55□□□□□ -1.84
RPS4XP62701 BTF3L4P4-201ENST00000506381 449 ntBASIC3.55□□□□□ -1.84
RPS4XP62701 AC010342.1-201ENST00000514047 877 ntBASIC3.55□□□□□ -1.84
RPS4XP62701 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.55□□□□□ -1.84
RPS4XP62701 AC091163.3-201ENST00000518269 1144 ntBASIC3.55□□□□□ -1.84
RPS4XP62701 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.55□□□□□ -1.84
RPS4XP62701 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.55□□□□□ -1.84
RPS4XP62701 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.55□□□□□ -1.84
RPS4XP62701 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.55□□□□□ -1.84
RPS4XP62701 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.55□□□□□ -1.84
RPS4XP62701 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.55□□□□□ -1.84
RPS4XP62701 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.55□□□□□ -1.84
RPS4XP62701 AC107016.1-201ENST00000550463 337 ntBASIC3.55□□□□□ -1.84
RPS4XP62701 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
RPS4XP62701 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.55□□□□□ -1.84
RPS4XP62701 AC093519.1-201ENST00000566109 298 ntBASIC3.55□□□□□ -1.84
RPS4XP62701 RN7SL703P-201ENST00000578485 302 ntBASIC3.55□□□□□ -1.84
RPS4XP62701 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.55□□□□□ -1.84
RPS4XP62701 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.55□□□□□ -1.84
RPS4XP62701 BNIP3P39-201ENST00000601077 554 ntBASIC3.55□□□□□ -1.84
RPS4XP62701 AC068790.5-201ENST00000602741 355 ntBASIC3.55□□□□□ -1.84
RPS4XP62701 AC096947.1-201ENST00000603233 470 ntBASIC3.55□□□□□ -1.84
RPS4XP62701 AL445435.1-201ENST00000604232 665 ntBASIC3.55□□□□□ -1.84
RPS4XP62701 HMGB1P50-201ENST00000605814 607 ntBASIC3.55□□□□□ -1.84
RPS4XP62701 AC024933.1-201ENST00000608472 348 ntBASIC3.55□□□□□ -1.84
RPS4XP62701 AC104763.3-201ENST00000613765 618 ntBASIC3.55□□□□□ -1.84
RPS4XP62701 AC123767.1-202ENST00000620407 817 ntBASIC3.55□□□□□ -1.84
RPS4XP62701 MIR6500-201ENST00000622700 86 ntBASIC3.55□□□□□ -1.84
RPS4XP62701 AL359715.5-201ENST00000623431 443 ntBASIC3.55□□□□□ -1.84
RPS4XP62701 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.55□□□□□ -1.84
RPS4XP62701 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RPS4XP62701 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.55□□□□□ -1.84
RPS4XP62701 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.55□□□□□ -1.84
RPS4XP62701 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.55□□□□□ -1.84
RPS4XP62701 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RPS4XP62701 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RPS4XP62701 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.54□□□□□ -1.84
RPS4XP62701 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RPS4XP62701 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.54□□□□□ -1.84
RPS4XP62701 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RPS4XP62701 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RPS4XP62701 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.54□□□□□ -1.84
RPS4XP62701 RNU6-224P-201ENST00000384055 107 ntBASIC3.54□□□□□ -1.84
RPS4XP62701 RNU1-89P-201ENST00000384592 164 ntBASIC3.54□□□□□ -1.84
RPS4XP62701 AL133264.1-201ENST00000407157 562 ntBASIC3.54□□□□□ -1.84
RPS4XP62701 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RPS4XP62701 AC114973.1-201ENST00000429057 632 ntBASIC3.54□□□□□ -1.84
RPS4XP62701 AC241584.1-201ENST00000438469 1241 ntBASIC3.54□□□□□ -1.84
RPS4XP62701 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.54□□□□□ -1.84
RPS4XP62701 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.54□□□□□ -1.84
RPS4XP62701 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RPS4XP62701 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.54□□□□□ -1.84
RPS4XP62701 VPS26AP1-201ENST00000483197 979 ntBASIC3.54□□□□□ -1.84
RPS4XP62701 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.54□□□□□ -1.84
RPS4XP62701 BOLA3P3-201ENST00000505182 232 ntBASIC3.54□□□□□ -1.84
RPS4XP62701 AC008802.1-201ENST00000519121 791 ntBASIC3.54□□□□□ -1.84
RPS4XP62701 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.54□□□□□ -1.84
RPS4XP62701 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.54□□□□□ -1.84
RPS4XP62701 AC120057.2-201ENST00000571520 271 ntBASIC3.54□□□□□ -1.84
RPS4XP62701 MIR5685-201ENST00000579080 79 ntBASIC3.54□□□□□ -1.84
RPS4XP62701 MIR5708-201ENST00000579723 85 ntBASIC3.54□□□□□ -1.84
RPS4XP62701 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.54□□□□□ -1.84
RPS4XP62701 AC005255.1-201ENST00000593748 216 ntBASIC3.54□□□□□ -1.84
RPS4XP62701 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.54□□□□□ -1.84
RPS4XP62701 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.54□□□□□ -1.84
RPS4XP62701 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.54□□□□□ -1.84
RPS4XP62701 AC026634.1-201ENST00000634369 198 ntBASIC3.54□□□□□ -1.84
RPS4XP62701 AC099654.9-201ENST00000637055 678 ntBASIC3.54□□□□□ -1.84
RPS4XP62701 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RPS4XP62701 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.54□□□□□ -1.84
RPS4XP62701 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RPS4XP62701 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RPS4XP62701 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RPS4XP62701 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms